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The map label for this gene is rbcS

Identifier: 17229018

GI number: 17229018

Start: 1787950

End: 1788279

Strand: Direct

Name: rbcS

Synonym: alr1526

Alternate gene names: 17229018

Gene position: 1787950-1788279 (Clockwise)

Preceding gene: 17229017

Following gene: 17229019

Centisome position: 27.88

GC content: 43.94

Gene sequence:

>330_bases
ATGCAAACCTTACCAAAAGAGCGTCGTTACGAAACCCTTTCTTACTTACCCCCCCTCACCGACGTTCAAATCGAAAAGCA
AGTCCAGTACATTCTGAGCCAAGGCTACATTCCAGCCGTTGAGTTCAACGAAGTTTCTGAACCTACCGAACTTTATTGGA
CACTGTGGAAGCTACCTTTGTTTGGTGCTAAAACATCCCGTGAAGTATTGGCAGAAGTTCAATCTTGCCGTTCTCAATAT
CCTGGTCACTACATCCGTGTTGTAGGATTTGACAATATTAAGCAGTGCCAAATTCTGAGCTTCATCGTTCACAAACCCAG
CAGATACTAA

Upstream 100 bases:

>100_bases
AATCAGAACAGCAGACAATTTCCGATACTGACTGGGATCATTAATCCAGTTAGGCCAGCATAAGTACTTATTTCCAAATA
GCAACCAATTATCACCAGCT

Downstream 100 bases:

>100_bases
AAGCTGATTTGGTTTAATAATTTATCCATTCAAGAGAGGTAGATGACTTTACCTCTCTTTTTTGTTTTTACAGTGTTTGG
GATATAGCATTTTTCATACT

Product: ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit

Products: NA

Alternate protein names: RuBisCO small subunit

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MQTLPKERRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFNEVSEPTELYWTLWKLPLFGAKTSREVLAEVQSCRSQY
PGHYIRVVGFDNIKQCQILSFIVHKPSRY

Sequences:

>Translated_109_residues
MQTLPKERRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFNEVSEPTELYWTLWKLPLFGAKTSREVLAEVQSCRSQY
PGHYIRVVGFDNIKQCQILSFIVHKPSRY
>Mature_109_residues
MQTLPKERRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFNEVSEPTELYWTLWKLPLFGAKTSREVLAEVQSCRSQY
PGHYIRVVGFDNIKQCQILSFIVHKPSRY

Specific function: RuBisCO catalyzes two reactions:the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the

COG id: COG4451

COG function: function code C; Ribulose bisphosphate carboxylase small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO small chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RBS_NOSS1 (P06514)

Other databases:

- EMBL:   J01540
- EMBL:   L02520
- EMBL:   L02521
- EMBL:   L02522
- EMBL:   BA000019
- PIR:   AH1996
- RefSeq:   NP_485566.1
- ProteinModelPortal:   P06514
- SMR:   P06514
- STRING:   P06514
- GeneID:   1105118
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr1526
- NMPDR:   fig|103690.1.peg.1833
- eggNOG:   COG4451
- HOGENOM:   HBG608223
- OMA:   SFIVHKP
- ProtClustDB:   CLSK893428
- BioCyc:   NSP103690:ALR1526-MONOMER
- InterPro:   IPR000894
- Gene3D:   G3DSA:3.30.190.10
- SMART:   SM00961

Pfam domain/function: PF00101 RuBisCO_small; SSF55239 RuBisCO_small

EC number: =4.1.1.39

Molecular weight: Translated: 12827; Mature: 12827

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLPKERRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFNEVSEPTELYWTLWKLPL
CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC
FGAKTSREVLAEVQSCRSQYPGHYIRVVGFDNIKQCQILSFIVHKPSRY
CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQTLPKERRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFNEVSEPTELYWTLWKLPL
CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC
FGAKTSREVLAEVQSCRSQYPGHYIRVVGFDNIKQCQILSFIVHKPSRY
CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6091125; 11759840