| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229007
Identifier: 17229007
GI number: 17229007
Start: 1774486
End: 1774971
Strand: Direct
Name: 17229007
Synonym: alr1514
Alternate gene names: NA
Gene position: 1774486-1774971 (Clockwise)
Preceding gene: 17229000
Following gene: 17229011
Centisome position: 27.67
GC content: 47.94
Gene sequence:
>486_bases ATGAGTTCAGAAACCTTAGCGGCGCTCAAGCCCTATCTCAGCTTTTTTCACCCTATTACTATGTGGATCTTGCTGGTCGT TGCGCTCTATGCGATGTACCTGGGTGTGCAAGTCCGACGGACGAGGCTGGCTAACGGAGATATCAAAAAAGAATTGGTGA AGGGTCGGTTTGCCATCCGCCATCACCAAATTGGTTCTATCCTCCTGGGGTTGATGGTAATGGGTGCGATCGGGGGGATA ATGGTAACCTACTTTAACAATGGCAAAATCGTGATTGGCCCTCATCTATTTGCTGGCTTAGGGATGGTGGGATTGATTTC TACTTCTGCGGCGTTAGTTCCCTTTATGCAGAAGCATGACTGGGTTCGTAGCATCCACGTTTCGCTGAATCTTATTCTGC TGGGATTGTTTGGCTGGCAAGCTGTGACAGGGGTGCAAATTGTGCAGAAGATTTTGAGCCAAATGATGAAGAATGTTGCA GCGTAA
Upstream 100 bases:
>100_bases ATTCATACAATTTATCCAGTATTAGAACATGATTTCAAACAACAGAATGTCATACTTTTTTGTGATTAATTCTCCATAGC TAATTTTGGAAATACTTATT
Downstream 100 bases:
>100_bases GTATTATTCACGCTACAGATTAAAGAGTTCTATTGAATGCAGATGTAAATCAAAGATTTTCTGGGATAGGTTTTCTTGAT TTGGATTGAATAATTCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSSETLAALKPYLSFFHPITMWILLVVALYAMYLGVQVRRTRLANGDIKKELVKGRFAIRHHQIGSILLGLMVMGAIGGI MVTYFNNGKIVIGPHLFAGLGMVGLISTSAALVPFMQKHDWVRSIHVSLNLILLGLFGWQAVTGVQIVQKILSQMMKNVA A
Sequences:
>Translated_161_residues MSSETLAALKPYLSFFHPITMWILLVVALYAMYLGVQVRRTRLANGDIKKELVKGRFAIRHHQIGSILLGLMVMGAIGGI MVTYFNNGKIVIGPHLFAGLGMVGLISTSAALVPFMQKHDWVRSIHVSLNLILLGLFGWQAVTGVQIVQKILSQMMKNVA A >Mature_160_residues SSETLAALKPYLSFFHPITMWILLVVALYAMYLGVQVRRTRLANGDIKKELVKGRFAIRHHQIGSILLGLMVMGAIGGIM VTYFNNGKIVIGPHLFAGLGMVGLISTSAALVPFMQKHDWVRSIHVSLNLILLGLFGWQAVTGVQIVQKILSQMMKNVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17702; Mature: 17571
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSETLAALKPYLSFFHPITMWILLVVALYAMYLGVQVRRTRLANGDIKKELVKGRFAIR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH HHQIGSILLGLMVMGAIGGIMVTYFNNGKIVIGPHLFAGLGMVGLISTSAALVPFMQKHD HHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH WVRSIHVSLNLILLGLFGWQAVTGVQIVQKILSQMMKNVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSETLAALKPYLSFFHPITMWILLVVALYAMYLGVQVRRTRLANGDIKKELVKGRFAIR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH HHQIGSILLGLMVMGAIGGIMVTYFNNGKIVIGPHLFAGLGMVGLISTSAALVPFMQKHD HHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH WVRSIHVSLNLILLGLFGWQAVTGVQIVQKILSQMMKNVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA