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The map label for this gene is ybhR [H]

Identifier: 17228993

GI number: 17228993

Start: 1762466

End: 1763593

Strand: Direct

Name: ybhR [H]

Synonym: alr1500

Alternate gene names: 17228993

Gene position: 1762466-1763593 (Clockwise)

Preceding gene: 17228992

Following gene: 17228994

Centisome position: 27.48

GC content: 41.31

Gene sequence:

>1128_bases
ATGATGATAAATCGCCGCCTATTGGCTTTGTTAATCAAAGAAAGTACTGAACTATTGCGTAATCGCCAACTGGTTATTTT
TCTCACAATCGCCCCAATTATTTCAATGGTGATTTTTGGCTATGTGATGAATTCCAATGTGACAAACTTACGGCTGAGTA
TTTTGGATCAAAATCAAGTAACAATCAGCCGAGATTTTGTAGATGCGTTTACTGCAAATCATGTGTTTCTTGCGACTCGC
CACACCAACAGTCAACAAACTCTCACCCAACAAGTTGAGCGGGGAGAAGTCGATGCTGGATTAATCATTCCACCTAGTTT
TGATCGGGATTTGCTGCAAACTGGAAAATCAGAAGTTCAGGTTGTGGTTGATGGAATTAACGCCTACAGTTCTGGACTTG
CAAAAGGCTATGTCAGCCAAATTACAACTCGATTTAACTTAGATTTACTCCAACGCTATCAACCTGTGTCAACTGGGTTA
GAAGTCCCCGTTCAAACTGAAATGACGTTGCGCTACAATCCCGGAATGCTTGATAGTTGGTTCTTTGTTCCTGGCGTTCT
GGGCGCAATCATCACCTTGAGTGCCATTCTGGCTGCGGCTGTGGAAGCGGTTCGAGAAAAGGATCAAGGAACACTAGAAC
AGTTGTTGATGACTCCAGTTGCATCAACTTATATTTTGATTTCTAAAATTGTGCCGATATCTGCTTTACTCACAGGCACG
TTGCTGATTTGTTTCCTCGTTGCTCACTGGGTTTTTGCCTTACCTTTTCGCGGAAATTTATTTTTATTACTGCTATTTTC
CATTCTCTACATTCAGATTGGTGTTGCCATTGGACTGGCAATTTCCACATTTTCTGAGAACAAATTGCAAACAATTTTGA
TTGGGATATTTCTCAATATTCCCATTATTTTATTAGGCGGTGCGGTGACGGCGGTGAATAGTATGCCGCTTGTATTTCGC
TGGATTGCCCAAATTAATCCGCTTTATCATTATTTGATCATTCTCCGCAGCATTCTTCTTAAAGGTGCAGGTTTGGAAGT
TTGGGGTTTAAATGCGATCGCCATGATTGTATTTGCAACCGTGACAGTTCTGGTGAGTGCAAATCGCTACCGTAGTCAAT
TAAGTTAA

Upstream 100 bases:

>100_bases
CCTGAAATACCTTGATTAATTCATCTTTATCTGTGTTTATCTGCGCCTATCTGCGTTTAATTATTCTTGATATTTGATTC
TATTTGGTATTAAAAAATCA

Downstream 100 bases:

>100_bases
CTCAGGGTGTATTTTATGTCACATACAGTTGATTCTTCAAAACCTATTACAATCCCTCAAAAATCTGTTACAACGCCTCA
AAAGCCTGACGATCTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MMINRRLLALLIKESTELLRNRQLVIFLTIAPIISMVIFGYVMNSNVTNLRLSILDQNQVTISRDFVDAFTANHVFLATR
HTNSQQTLTQQVERGEVDAGLIIPPSFDRDLLQTGKSEVQVVVDGINAYSSGLAKGYVSQITTRFNLDLLQRYQPVSTGL
EVPVQTEMTLRYNPGMLDSWFFVPGVLGAIITLSAILAAAVEAVREKDQGTLEQLLMTPVASTYILISKIVPISALLTGT
LLICFLVAHWVFALPFRGNLFLLLLFSILYIQIGVAIGLAISTFSENKLQTILIGIFLNIPIILLGGAVTAVNSMPLVFR
WIAQINPLYHYLIILRSILLKGAGLEVWGLNAIAMIVFATVTVLVSANRYRSQLS

Sequences:

>Translated_375_residues
MMINRRLLALLIKESTELLRNRQLVIFLTIAPIISMVIFGYVMNSNVTNLRLSILDQNQVTISRDFVDAFTANHVFLATR
HTNSQQTLTQQVERGEVDAGLIIPPSFDRDLLQTGKSEVQVVVDGINAYSSGLAKGYVSQITTRFNLDLLQRYQPVSTGL
EVPVQTEMTLRYNPGMLDSWFFVPGVLGAIITLSAILAAAVEAVREKDQGTLEQLLMTPVASTYILISKIVPISALLTGT
LLICFLVAHWVFALPFRGNLFLLLLFSILYIQIGVAIGLAISTFSENKLQTILIGIFLNIPIILLGGAVTAVNSMPLVFR
WIAQINPLYHYLIILRSILLKGAGLEVWGLNAIAMIVFATVTVLVSANRYRSQLS
>Mature_375_residues
MMINRRLLALLIKESTELLRNRQLVIFLTIAPIISMVIFGYVMNSNVTNLRLSILDQNQVTISRDFVDAFTANHVFLATR
HTNSQQTLTQQVERGEVDAGLIIPPSFDRDLLQTGKSEVQVVVDGINAYSSGLAKGYVSQITTRFNLDLLQRYQPVSTGL
EVPVQTEMTLRYNPGMLDSWFFVPGVLGAIITLSAILAAAVEAVREKDQGTLEQLLMTPVASTYILISKIVPISALLTGT
LLICFLVAHWVFALPFRGNLFLLLLFSILYIQIGVAIGLAISTFSENKLQTILIGIFLNIPIILLGGAVTAVNSMPLVFR
WIAQINPLYHYLIILRSILLKGAGLEVWGLNAIAMIVFATVTVLVSANRYRSQLS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=353, Percent_Identity=30.3116147308782, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1787011, Length=343, Percent_Identity=29.4460641399417, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI48994943, Length=351, Percent_Identity=29.6296296296296, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI226510979, Length=348, Percent_Identity=27.0114942528736, Blast_Score=105, Evalue=6e-24,
Organism=Drosophila melanogaster, GI85725260, Length=379, Percent_Identity=22.4274406332454, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI85725262, Length=379, Percent_Identity=22.6912928759894, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24650855, Length=377, Percent_Identity=23.6074270557029, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24650853, Length=377, Percent_Identity=23.6074270557029, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41435; Mature: 41435

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS00027 HOMEOBOX_1 ; PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMINRRLLALLIKESTELLRNRQLVIFLTIAPIISMVIFGYVMNSNVTNLRLSILDQNQV
CCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCE
TISRDFVDAFTANHVFLATRHTNSQQTLTQQVERGEVDAGLIIPPSFDRDLLQTGKSEVQ
EEEHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCCEEECCCCCHHHHHCCCHHEE
VVVDGINAYSSGLAKGYVSQITTRFNLDLLQRYQPVSTGLEVPVQTEMTLRYNPGMLDSW
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCHH
FFVPGVLGAIITLSAILAAAVEAVREKDQGTLEQLLMTPVASTYILISKIVPISALLTGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLICFLVAHWVFALPFRGNLFLLLLFSILYIQIGVAIGLAISTFSENKLQTILIGIFLNI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
PIILLGGAVTAVNSMPLVFRWIAQINPLYHYLIILRSILLKGAGLEVWGLNAIAMIVFAT
HHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH
VTVLVSANRYRSQLS
HHHHHHCHHHHHCCC
>Mature Secondary Structure
MMINRRLLALLIKESTELLRNRQLVIFLTIAPIISMVIFGYVMNSNVTNLRLSILDQNQV
CCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCE
TISRDFVDAFTANHVFLATRHTNSQQTLTQQVERGEVDAGLIIPPSFDRDLLQTGKSEVQ
EEEHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCCEEECCCCCHHHHHCCCHHEE
VVVDGINAYSSGLAKGYVSQITTRFNLDLLQRYQPVSTGLEVPVQTEMTLRYNPGMLDSW
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCHH
FFVPGVLGAIITLSAILAAAVEAVREKDQGTLEQLLMTPVASTYILISKIVPISALLTGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLICFLVAHWVFALPFRGNLFLLLLFSILYIQIGVAIGLAISTFSENKLQTILIGIFLNI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
PIILLGGAVTAVNSMPLVFRWIAQINPLYHYLIILRSILLKGAGLEVWGLNAIAMIVFAT
HHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH
VTVLVSANRYRSQLS
HHHHHHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]