| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228991
Identifier: 17228991
GI number: 17228991
Start: 1760814
End: 1761431
Strand: Direct
Name: 17228991
Synonym: alr1498
Alternate gene names: NA
Gene position: 1760814-1761431 (Clockwise)
Preceding gene: 17228987
Following gene: 17228992
Centisome position: 27.45
GC content: 42.72
Gene sequence:
>618_bases GTGCAGGTAGAGGGTGATGTTTACTCCTTTGGCGGCAAAATCGTCAAAGAAGAAGGTGCGAATATTGGCGGTAGCTATAC AACTAATGATCAACCTGGGATGATGGATGGTTCCCATCGAGGTAGAGGTAGCTTCTTCTACGCTATTTCTCTCGGTCCCA TTTTTAGAATTGGTAACGCCATATTAGCAGCGATTCTTGGACTGATTATTTTGCATACCAATCCAAAGTTCCTGCCTTCT TTGGCTACAAAATTGCGTCAACACCCCAGTTTGGCTGTTTTATGGGGAATGGGGGCAATTGTCGGCATTATCTTTGTGAA TGTGTTTCTAGCGATTACGCTGATTGGTATTCCTCTGATTCCACTACTAAGCCTAACGGTGATTATCACTTCTTTAGTCG GATCATTAGCCGTGGCACTTTTTGTTGGTCAAAGTCTAGTCGGTAATCGTAATTGGTCCTTACAGCAGCAGTTTTTGGTA GGTTTGGCGGTCGTGACTATTCTGACCCTAATTCCATTTTTCGGAAGTTTAATAATTTTCCTAGTCAATATGTTCGGATT GGGTGTCATCTTACTGTGGAAACTTGGTAGAGAAAAACCTCAAATAGCGACTGAGTGA
Upstream 100 bases:
>100_bases AAATGCCTTGGCTTTTGGGGGGAGTGTTACAGTATCCCCTAATGCTAGAGTTTTAAATACTGCGATCGCATTTGGCGGGG ATGTCATCCTGAAAAAAGGA
Downstream 100 bases:
>100_bases GGGCATTCTCCTGACTTTACCTGTGGCTATGGATCAGGAGATTGAGTTGCAAATCCCATCTACAACGCTCCAAAAGTGGT AAACGATTTCGGCTCGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MQVEGDVYSFGGKIVKEEGANIGGSYTTNDQPGMMDGSHRGRGSFFYAISLGPIFRIGNAILAAILGLIILHTNPKFLPS LATKLRQHPSLAVLWGMGAIVGIIFVNVFLAITLIGIPLIPLLSLTVIITSLVGSLAVALFVGQSLVGNRNWSLQQQFLV GLAVVTILTLIPFFGSLIIFLVNMFGLGVILLWKLGREKPQIATE
Sequences:
>Translated_205_residues MQVEGDVYSFGGKIVKEEGANIGGSYTTNDQPGMMDGSHRGRGSFFYAISLGPIFRIGNAILAAILGLIILHTNPKFLPS LATKLRQHPSLAVLWGMGAIVGIIFVNVFLAITLIGIPLIPLLSLTVIITSLVGSLAVALFVGQSLVGNRNWSLQQQFLV GLAVVTILTLIPFFGSLIIFLVNMFGLGVILLWKLGREKPQIATE >Mature_205_residues MQVEGDVYSFGGKIVKEEGANIGGSYTTNDQPGMMDGSHRGRGSFFYAISLGPIFRIGNAILAAILGLIILHTNPKFLPS LATKLRQHPSLAVLWGMGAIVGIIFVNVFLAITLIGIPLIPLLSLTVIITSLVGSLAVALFVGQSLVGNRNWSLQQQFLV GLAVVTILTLIPFFGSLIIFLVNMFGLGVILLWKLGREKPQIATE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21959; Mature: 21959
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVEGDVYSFGGKIVKEEGANIGGSYTTNDQPGMMDGSHRGRGSFFYAISLGPIFRIGNA CCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHH ILAAILGLIILHTNPKFLPSLATKLRQHPSLAVLWGMGAIVGIIFVNVFLAITLIGIPLI HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLLSLTVIITSLVGSLAVALFVGQSLVGNRNWSLQQQFLVGLAVVTILTLIPFFGSLIIF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVNMFGLGVILLWKLGREKPQIATE HHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQVEGDVYSFGGKIVKEEGANIGGSYTTNDQPGMMDGSHRGRGSFFYAISLGPIFRIGNA CCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHH ILAAILGLIILHTNPKFLPSLATKLRQHPSLAVLWGMGAIVGIIFVNVFLAITLIGIPLI HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLLSLTVIITSLVGSLAVALFVGQSLVGNRNWSLQQQFLVGLAVVTILTLIPFFGSLIIF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVNMFGLGVILLWKLGREKPQIATE HHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA