| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228271
Identifier: 17228271
GI number: 17228271
Start: 899704
End: 900894
Strand: Direct
Name: 17228271
Synonym: alr0776
Alternate gene names: NA
Gene position: 899704-900894 (Clockwise)
Preceding gene: 17228269
Following gene: 17228275
Centisome position: 14.03
GC content: 43.91
Gene sequence:
>1191_bases ATGGGTGCGTTCTTTTTAGGGTTAATATTGTTATCTTTGGTCATTTGGTTGGGATTACTATTTTTTTGGGGACAGTTTTG GCGATTAGACCAGAGATTAGAAGGTGAAGAGATTCCGTTACAATCTTTACCGAAAATTTGTGCGGTTATCCCTGCACGTA ACGAAGCTGAGTTCATACCGATTAGCTTGCGATCGCTCCTTCTTCAAGATTATCCTGGAGACTTACACATCTTTTTAGTT GATGACCAAAGTACAGATGGTACAGCCGCTTTTGCTGAAGGGGTAGCCCACGCTGTAGACAAAGCCCAACAATTACACAT TGTTTCTGGCGAATCCTTACCCCCCGCTTGGTCTGGTAAACTCTGGGCAGTTGAACAAGGTATTCAAAAAGCCAAAACCC TTGCACCAGATTATTTTTTTCTCACCGATGCAGACATTGAACATGATGTCAGCAACCTGCGGCGATTAGTCGCCAAAGCC CTACAAGAAGATTTAGACCTGGCATCTGTAATGGTAAAACTCAGGTGTGAAAGCTTTTGGGAAAAATTATTAATTCCCGC CTTCGTCTTTTTCTTTCAAAAACTCTACCCCTTTCGCTGGGTAAATAACCCCAAAAACAAAATGGCGGCTGCTGCTGGTG GGTCTATTTTAATTCGTCGAGAAGTCCTAGAACAAATTGGTGGTATTCAAGTCATTCGCCAGGCCTTAATTGATGACTGC ACCCTCGCACAAGTCGTCAAGTCTGGTAGGCTAGGAGACAAATTAAACAATGCTATTGCCAGAAAAATCTGGCTAGGCCT AAGTTCATCAACTCGCAGTCTACGACCATATGAATCTTTGCAAACAATTTGGGCTATGGTAGCGCGGACTGCATACACTC AGTTAAATTATTCCCCCTGGTTACTTTTGGGAACTGTTGTAGGGATGACGTTGATTTATTTGCTCCCACCTGTAGCTACT ATTATCGGTGTATTGATGGGAGATTGGAGAATTACGCTGACAGGTTTAGGCGTATGGTTGCTGATGTCCTTGGCTTATTT ACCCACGATTCGCTTTTATAAACGTTCTCCCTTATTAGCCTTTAGTTTACCAGCGATCGCCTTTCTCTATACCCTCATGA CCATTGACTCTGCATTCCGTCATTGGCAAGGGCGCGGTGGTGCGTGGAAAGGTAGAGTATACCCAGGCTAG
Upstream 100 bases:
>100_bases ATTTTTACCACACTCAGCAAATATTGTATTGTGTTTGAGGCTAATCAATTCAAAATTCAAAAATAATTAGTCCCCATAGT ATTGAAGCGGTAACAAACAG
Downstream 100 bases:
>100_bases TATCGCAAGGCGGAATTCAAAATACCCTACGGGAAGCTAAAGCTACAAAATTCAAAATGAATACAGCATAAGGGTTTTGT TGATTTGCAACGCGTAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase; Hopene-Associated Glycosyltransferase HpnB; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyltransferase; Integral Membrane Protein; Glycosyl Transferase Group 2 Family; HpnB Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase Protein; TPR Domain-Containing Protein; Glycosyl Transferase Domain-Containing Protein; Squalene-Phytoene Synthase
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MGAFFLGLILLSLVIWLGLLFFWGQFWRLDQRLEGEEIPLQSLPKICAVIPARNEAEFIPISLRSLLLQDYPGDLHIFLV DDQSTDGTAAFAEGVAHAVDKAQQLHIVSGESLPPAWSGKLWAVEQGIQKAKTLAPDYFFLTDADIEHDVSNLRRLVAKA LQEDLDLASVMVKLRCESFWEKLLIPAFVFFFQKLYPFRWVNNPKNKMAAAAGGSILIRREVLEQIGGIQVIRQALIDDC TLAQVVKSGRLGDKLNNAIARKIWLGLSSSTRSLRPYESLQTIWAMVARTAYTQLNYSPWLLLGTVVGMTLIYLLPPVAT IIGVLMGDWRITLTGLGVWLLMSLAYLPTIRFYKRSPLLAFSLPAIAFLYTLMTIDSAFRHWQGRGGAWKGRVYPG
Sequences:
>Translated_396_residues MGAFFLGLILLSLVIWLGLLFFWGQFWRLDQRLEGEEIPLQSLPKICAVIPARNEAEFIPISLRSLLLQDYPGDLHIFLV DDQSTDGTAAFAEGVAHAVDKAQQLHIVSGESLPPAWSGKLWAVEQGIQKAKTLAPDYFFLTDADIEHDVSNLRRLVAKA LQEDLDLASVMVKLRCESFWEKLLIPAFVFFFQKLYPFRWVNNPKNKMAAAAGGSILIRREVLEQIGGIQVIRQALIDDC TLAQVVKSGRLGDKLNNAIARKIWLGLSSSTRSLRPYESLQTIWAMVARTAYTQLNYSPWLLLGTVVGMTLIYLLPPVAT IIGVLMGDWRITLTGLGVWLLMSLAYLPTIRFYKRSPLLAFSLPAIAFLYTLMTIDSAFRHWQGRGGAWKGRVYPG >Mature_395_residues GAFFLGLILLSLVIWLGLLFFWGQFWRLDQRLEGEEIPLQSLPKICAVIPARNEAEFIPISLRSLLLQDYPGDLHIFLVD DQSTDGTAAFAEGVAHAVDKAQQLHIVSGESLPPAWSGKLWAVEQGIQKAKTLAPDYFFLTDADIEHDVSNLRRLVAKAL QEDLDLASVMVKLRCESFWEKLLIPAFVFFFQKLYPFRWVNNPKNKMAAAAGGSILIRREVLEQIGGIQVIRQALIDDCT LAQVVKSGRLGDKLNNAIARKIWLGLSSSTRSLRPYESLQTIWAMVARTAYTQLNYSPWLLLGTVVGMTLIYLLPPVATI IGVLMGDWRITLTGLGVWLLMSLAYLPTIRFYKRSPLLAFSLPAIAFLYTLMTIDSAFRHWQGRGGAWKGRVYPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44425; Mature: 44293
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAFFLGLILLSLVIWLGLLFFWGQFWRLDQRLEGEEIPLQSLPKICAVIPARNEAEFIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEH ISLRSLLLQDYPGDLHIFLVDDQSTDGTAAFAEGVAHAVDKAQQLHIVSGESLPPAWSGK HHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC LWAVEQGIQKAKTLAPDYFFLTDADIEHDVSNLRRLVAKALQEDLDLASVMVKLRCESFW HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKLLIPAFVFFFQKLYPFRWVNNPKNKMAAAAGGSILIRREVLEQIGGIQVIRQALIDDC HHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHCCH TLAQVVKSGRLGDKLNNAIARKIWLGLSSSTRSLRPYESLQTIWAMVARTAYTQLNYSPW HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH LLLGTVVGMTLIYLLPPVATIIGVLMGDWRITLTGLGVWLLMSLAYLPTIRFYKRSPLLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHH FSLPAIAFLYTLMTIDSAFRHWQGRGGAWKGRVYPG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GAFFLGLILLSLVIWLGLLFFWGQFWRLDQRLEGEEIPLQSLPKICAVIPARNEAEFIP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEH ISLRSLLLQDYPGDLHIFLVDDQSTDGTAAFAEGVAHAVDKAQQLHIVSGESLPPAWSGK HHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC LWAVEQGIQKAKTLAPDYFFLTDADIEHDVSNLRRLVAKALQEDLDLASVMVKLRCESFW HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKLLIPAFVFFFQKLYPFRWVNNPKNKMAAAAGGSILIRREVLEQIGGIQVIRQALIDDC HHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHCCH TLAQVVKSGRLGDKLNNAIARKIWLGLSSSTRSLRPYESLQTIWAMVARTAYTQLNYSPW HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH LLLGTVVGMTLIYLLPPVATIIGVLMGDWRITLTGLGVWLLMSLAYLPTIRFYKRSPLLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHH FSLPAIAFLYTLMTIDSAFRHWQGRGGAWKGRVYPG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA