Click here to switch to the map view.

The map label for this gene is 17228239

Identifier: 17228239

GI number: 17228239

Start: 866400

End: 867884

Strand: Direct

Name: 17228239

Synonym: alr0744

Alternate gene names: NA

Gene position: 866400-867884 (Clockwise)

Preceding gene: 17228237

Following gene: 17228245

Centisome position: 13.51

GC content: 34.28

Gene sequence:

>1485_bases
ATGGTGAGAAGCCAACAAAACCCACAAAAACATAATTGGCTATTTTTCTTTATTAGTGTTTTTATTGTATTAATAGCTAC
TCTTTATCCATTTGATTTTTCAAAAATAGTAAAATTTTCAATTACTGAACTTATTGCCAGCTTTAATAACTCAAGTTCTT
TCCAAGACCAGGTTAATAATATTTTATTATTTCTACCTGTGGGTTGGAGTTTCGGTAATTTATGCCAAAAGTCAATCAGA
AAAATTACATTACAAATTCTCTTTGTAATTTTGGTAAGCTTTGGCTTGTCATTAACAGTTGAATTTCTCCAGATATTCTT
ACCCTCTAGAAGTCCCACGCCTGCTGATTTATTGAATAATAGTTTAGGGGGCTTATTTGGGTTTATTTGTTTTTCTATTT
GGAATGCAAAAAGTTTCAGTAGTACAGTAGAAAAATTAGACTCAAGTCGAGTAAGTAAATCATCTAAACTAATTATTTGT
TTTTTCTGTGGATATTTAATTTTGACATTGTTGATCTCGCTACTCTGGCAAGGTACAACTAATTTAAGTAATTGGGATAG
AAACTATTACTTAAGTGTTGGTAATGAAATTACAGGTAATAAAGCATGGGCAGGATATGTATCGGAAATCTCTATTGTTG
ATAGAGCTATATCCAAAAATGAGGCATCACAAACTTTGGCTGATGCCAATTACTTGCATAAGCTCGGTAATTCTTTAGTA
GCTCACTATAAACTGAATGGTGAATGTTGCTATCAAGACCAAACAGGTAATCAGCCAGAACTATTATGGCAAGGAAGGTC
TGCCAGTACACCAAAAAGCCAAGGTGCATTTTTAGATGCTCATCATTGGTTAAAAACATCGACTCCTGTCAGCCATCTTA
GCCAAAGAATGAGTCAGACATCGGAGTTTACTATTAGTACAGCGATCGCCACTACCAATGTAGACCAGAAAGGCCCGGCA
CGAATTATTTCTGTTTCTGGTAGTTCTCAACGCCGCAATTGGACGCTAGGACAGCAGGGAAATAGTCTAGATTTCCGCTT
ACGTACACCCCTTACGGGAGAAAATGGCACAGAATTGAAACTAAATATACCTAATGTATTTACAGACACTTATCTTCATC
ATCTTGTTATCACCTATTCCAGAGGAAACATCCAAGTATATATAGACAAACTAGAAAATTTTCACTCTTTTAACTTGCTG
GATTTAATTCCCAAAGAGCAGCGAATTTTCTATTATGCACTCACTTTCATGCCTTTAGGAATAGGTTTAGGAATAATCAC
TTTCCTAGCTAGAAAAAAATTAATATTTTATAGAATTTTATTTTATAGTGGAATCTTGATACCTTCTTTGATGTTAGAAG
GTATTTTAGTTAGTGAAAGTGGCAAAGATTTCAGCATCAAACACTTACTGCTTGGTATCTCTTTTACAGCAGTGACTATG
ATATTTTTGAGAATCCGGGCAGCTAGATTAAAAATGATCAGTTAG

Upstream 100 bases:

>100_bases
AAAGCAAAATTTTATTTGAGCAAATAATATTAGATAAGCATGAGCATTATCTAAATTTAGATACTGAGTATTAACCAGTA
ATTATTAACAGTTATTCCTT

Downstream 100 bases:

>100_bases
TGGTCAGCCAATCCCTTCGGGAATTCAAAATTCACTCATACCCTACGGCTATTCCTGCGGAGAACTCCTAGAGTAGGCTA
CGCCAACAAAATTCAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: VanZ Like Family

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MVRSQQNPQKHNWLFFFISVFIVLIATLYPFDFSKIVKFSITELIASFNNSSSFQDQVNNILLFLPVGWSFGNLCQKSIR
KITLQILFVILVSFGLSLTVEFLQIFLPSRSPTPADLLNNSLGGLFGFICFSIWNAKSFSSTVEKLDSSRVSKSSKLIIC
FFCGYLILTLLISLLWQGTTNLSNWDRNYYLSVGNEITGNKAWAGYVSEISIVDRAISKNEASQTLADANYLHKLGNSLV
AHYKLNGECCYQDQTGNQPELLWQGRSASTPKSQGAFLDAHHWLKTSTPVSHLSQRMSQTSEFTISTAIATTNVDQKGPA
RIISVSGSSQRRNWTLGQQGNSLDFRLRTPLTGENGTELKLNIPNVFTDTYLHHLVITYSRGNIQVYIDKLENFHSFNLL
DLIPKEQRIFYYALTFMPLGIGLGIITFLARKKLIFYRILFYSGILIPSLMLEGILVSESGKDFSIKHLLLGISFTAVTM
IFLRIRAARLKMIS

Sequences:

>Translated_494_residues
MVRSQQNPQKHNWLFFFISVFIVLIATLYPFDFSKIVKFSITELIASFNNSSSFQDQVNNILLFLPVGWSFGNLCQKSIR
KITLQILFVILVSFGLSLTVEFLQIFLPSRSPTPADLLNNSLGGLFGFICFSIWNAKSFSSTVEKLDSSRVSKSSKLIIC
FFCGYLILTLLISLLWQGTTNLSNWDRNYYLSVGNEITGNKAWAGYVSEISIVDRAISKNEASQTLADANYLHKLGNSLV
AHYKLNGECCYQDQTGNQPELLWQGRSASTPKSQGAFLDAHHWLKTSTPVSHLSQRMSQTSEFTISTAIATTNVDQKGPA
RIISVSGSSQRRNWTLGQQGNSLDFRLRTPLTGENGTELKLNIPNVFTDTYLHHLVITYSRGNIQVYIDKLENFHSFNLL
DLIPKEQRIFYYALTFMPLGIGLGIITFLARKKLIFYRILFYSGILIPSLMLEGILVSESGKDFSIKHLLLGISFTAVTM
IFLRIRAARLKMIS
>Mature_494_residues
MVRSQQNPQKHNWLFFFISVFIVLIATLYPFDFSKIVKFSITELIASFNNSSSFQDQVNNILLFLPVGWSFGNLCQKSIR
KITLQILFVILVSFGLSLTVEFLQIFLPSRSPTPADLLNNSLGGLFGFICFSIWNAKSFSSTVEKLDSSRVSKSSKLIIC
FFCGYLILTLLISLLWQGTTNLSNWDRNYYLSVGNEITGNKAWAGYVSEISIVDRAISKNEASQTLADANYLHKLGNSLV
AHYKLNGECCYQDQTGNQPELLWQGRSASTPKSQGAFLDAHHWLKTSTPVSHLSQRMSQTSEFTISTAIATTNVDQKGPA
RIISVSGSSQRRNWTLGQQGNSLDFRLRTPLTGENGTELKLNIPNVFTDTYLHHLVITYSRGNIQVYIDKLENFHSFNLL
DLIPKEQRIFYYALTFMPLGIGLGIITFLARKKLIFYRILFYSGILIPSLMLEGILVSESGKDFSIKHLLLGISFTAVTM
IFLRIRAARLKMIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55686; Mature: 55686

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRSQQNPQKHNWLFFFISVFIVLIATLYPFDFSKIVKFSITELIASFNNSSSFQDQVNN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCC
ILLFLPVGWSFGNLCQKSIRKITLQILFVILVSFGLSLTVEFLQIFLPSRSPTPADLLNN
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC
SLGGLFGFICFSIWNAKSFSSTVEKLDSSRVSKSSKLIICFFCGYLILTLLISLLWQGTT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCC
NLSNWDRNYYLSVGNEITGNKAWAGYVSEISIVDRAISKNEASQTLADANYLHKLGNSLV
CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEE
AHYKLNGECCYQDQTGNQPELLWQGRSASTPKSQGAFLDAHHWLKTSTPVSHLSQRMSQT
EEEEECCEEEECCCCCCCCCEEECCCCCCCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHC
SEFTISTAIATTNVDQKGPARIISVSGSSQRRNWTLGQQGNSLDFRLRTPLTGENGTELK
CCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEE
LNIPNVFTDTYLHHLVITYSRGNIQVYIDKLENFHSFNLLDLIPKEQRIFYYALTFMPLG
EECCCHHHHHHHEEEEEEEECCCEEEEEECCCCCCCCCHHHCCCCCCCEEEEHHHHHHHH
IGLGIITFLARKKLIFYRILFYSGILIPSLMLEGILVSESGKDFSIKHLLLGISFTAVTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHH
IFLRIRAARLKMIS
HHHHHHHHHHHCCC
>Mature Secondary Structure
MVRSQQNPQKHNWLFFFISVFIVLIATLYPFDFSKIVKFSITELIASFNNSSSFQDQVNN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCC
ILLFLPVGWSFGNLCQKSIRKITLQILFVILVSFGLSLTVEFLQIFLPSRSPTPADLLNN
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC
SLGGLFGFICFSIWNAKSFSSTVEKLDSSRVSKSSKLIICFFCGYLILTLLISLLWQGTT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCC
NLSNWDRNYYLSVGNEITGNKAWAGYVSEISIVDRAISKNEASQTLADANYLHKLGNSLV
CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEE
AHYKLNGECCYQDQTGNQPELLWQGRSASTPKSQGAFLDAHHWLKTSTPVSHLSQRMSQT
EEEEECCEEEECCCCCCCCCEEECCCCCCCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHC
SEFTISTAIATTNVDQKGPARIISVSGSSQRRNWTLGQQGNSLDFRLRTPLTGENGTELK
CCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEE
LNIPNVFTDTYLHHLVITYSRGNIQVYIDKLENFHSFNLLDLIPKEQRIFYYALTFMPLG
EECCCHHHHHHHEEEEEEEECCCEEEEEECCCCCCCCCHHHCCCCCCCEEEEHHHHHHHH
IGLGIITFLARKKLIFYRILFYSGILIPSLMLEGILVSESGKDFSIKHLLLGISFTAVTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHH
IFLRIRAARLKMIS
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA