| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17228175
Identifier: 17228175
GI number: 17228175
Start: 787330
End: 788319
Strand: Direct
Name: 17228175
Synonym: alr0679
Alternate gene names: NA
Gene position: 787330-788319 (Clockwise)
Preceding gene: 17228173
Following gene: 17228176
Centisome position: 12.28
GC content: 37.27
Gene sequence:
>990_bases ATGGAATATATTTCATCAGCTTTGCGTTTGGAATTTCGTGAATTCTGTGTCGAGCTAGTTCTGCGTCAGATTGATGATAT GTTCCAAATGGCTGGTATTCAACCAGGCCAACCTGAGCGTGTTGTTAGTGGTGCGAGACGTTCACGTGTTGAGGAATACT ATGCATCTATAGACTGGACTAACTTAACGGATACTCAAAAATTCTTAAAAGTTATAGGATTGGTGTTATCGCAATCCTAT ATTTCTGATGAGAGAAAAGAGTTTATACGAAATATATGTATAAAAGAAGGCTTGATTGTTGAGGGGGAACAAATCCAACT GCCGCAAATAACATCTCCTAATGAACCTGATGATTTATTTATGCATCAATTTCCTGGGGGACTTCCTTTTGGATTGGTGA AACCTGAGTTTGCTGTAACTGCCAAAGAAGGCAAGCAATCACTGAAATTTGAATTGAAGTCTGGCATAGGTATTATTTGG CGGGGTGTATATCCAAATTTTGATTTTCCAACTTTTCAAACTGCTTGTGGAATTAACTCGGAAACAAACCTAGCACTAAA AAAAGCTCTTCTTGCCATGAATCAAACTGAATCTGAAAAAATATTTTTTCAGTCATATGCCAAACATTTCGGCATGGCGG ATAATCATATACCAATGTTAATTCCACAAGCCTGGATACAATGGCATTCGTCATCAAAAAAGGTTTTGCAAGCTTCAGGA AGTTCACTAGCAAAAGAACTGTATCGTGTAGATTTTGTCGCATTTTGGAATAATCATAGATATGCGATATTGATTGACGA CATTAGCCATTACGCGATAAAGCATGGTAATCAGTGGATAGCTGATGAGGAAACCTACTCAAAACGCCTAGAGGAAGATC GAAAATTACAAGTAGAGGGATGGAATATTTTTAGAGTGAGTAATTGGGAGGTCAGGCAGAATAAAGTGAGTGAAATAGTT ATTGACTTACAAAAGTTCATTGGATTTTAA
Upstream 100 bases:
>100_bases TGCAGTAAATGGGTAGCTCGCATCTTGCACCTGTTCCATCAATTTTTTTGGGCGTGTTCCATAATAAAAACATCCTGAAA ATTCTGTCTAATCTCCTAAT
Downstream 100 bases:
>100_bases GTGCGATGCCTGCGGCGGGCGTAGCCATTGCCTATCTTGTCGGGTGCTTACTCCGCCGATAAATTCATGGGAACACACCA AGATTGTAGACTTTAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MEYISSALRLEFREFCVELVLRQIDDMFQMAGIQPGQPERVVSGARRSRVEEYYASIDWTNLTDTQKFLKVIGLVLSQSY ISDERKEFIRNICIKEGLIVEGEQIQLPQITSPNEPDDLFMHQFPGGLPFGLVKPEFAVTAKEGKQSLKFELKSGIGIIW RGVYPNFDFPTFQTACGINSETNLALKKALLAMNQTESEKIFFQSYAKHFGMADNHIPMLIPQAWIQWHSSSKKVLQASG SSLAKELYRVDFVAFWNNHRYAILIDDISHYAIKHGNQWIADEETYSKRLEEDRKLQVEGWNIFRVSNWEVRQNKVSEIV IDLQKFIGF
Sequences:
>Translated_329_residues MEYISSALRLEFREFCVELVLRQIDDMFQMAGIQPGQPERVVSGARRSRVEEYYASIDWTNLTDTQKFLKVIGLVLSQSY ISDERKEFIRNICIKEGLIVEGEQIQLPQITSPNEPDDLFMHQFPGGLPFGLVKPEFAVTAKEGKQSLKFELKSGIGIIW RGVYPNFDFPTFQTACGINSETNLALKKALLAMNQTESEKIFFQSYAKHFGMADNHIPMLIPQAWIQWHSSSKKVLQASG SSLAKELYRVDFVAFWNNHRYAILIDDISHYAIKHGNQWIADEETYSKRLEEDRKLQVEGWNIFRVSNWEVRQNKVSEIV IDLQKFIGF >Mature_329_residues MEYISSALRLEFREFCVELVLRQIDDMFQMAGIQPGQPERVVSGARRSRVEEYYASIDWTNLTDTQKFLKVIGLVLSQSY ISDERKEFIRNICIKEGLIVEGEQIQLPQITSPNEPDDLFMHQFPGGLPFGLVKPEFAVTAKEGKQSLKFELKSGIGIIW RGVYPNFDFPTFQTACGINSETNLALKKALLAMNQTESEKIFFQSYAKHFGMADNHIPMLIPQAWIQWHSSSKKVLQASG SSLAKELYRVDFVAFWNNHRYAILIDDISHYAIKHGNQWIADEETYSKRLEEDRKLQVEGWNIFRVSNWEVRQNKVSEIV IDLQKFIGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38031; Mature: 38031
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYISSALRLEFREFCVELVLRQIDDMFQMAGIQPGQPERVVSGARRSRVEEYYASIDWT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC NLTDTQKFLKVIGLVLSQSYISDERKEFIRNICIKEGLIVEGEQIQLPQITSPNEPDDLF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEECCCCCCCCCCHHHH MHQFPGGLPFGLVKPEFAVTAKEGKQSLKFELKSGIGIIWRGVYPNFDFPTFQTACGINS HHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCC ETNLALKKALLAMNQTESEKIFFQSYAKHFGMADNHIPMLIPQAWIQWHSSSKKVLQASG CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCHHHHHHCC SSLAKELYRVDFVAFWNNHRYAILIDDISHYAIKHGNQWIADEETYSKRLEEDRKLQVEG HHHHHHHHHHHHEEEECCCEEEEEEECHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEC WNIFRVSNWEVRQNKVSEIVIDLQKFIGF EEEEEECCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEYISSALRLEFREFCVELVLRQIDDMFQMAGIQPGQPERVVSGARRSRVEEYYASIDWT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC NLTDTQKFLKVIGLVLSQSYISDERKEFIRNICIKEGLIVEGEQIQLPQITSPNEPDDLF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEECCCCCCCCCCHHHH MHQFPGGLPFGLVKPEFAVTAKEGKQSLKFELKSGIGIIWRGVYPNFDFPTFQTACGINS HHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCC ETNLALKKALLAMNQTESEKIFFQSYAKHFGMADNHIPMLIPQAWIQWHSSSKKVLQASG CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCHHHHHHCC SSLAKELYRVDFVAFWNNHRYAILIDDISHYAIKHGNQWIADEETYSKRLEEDRKLQVEG HHHHHHHHHHHHEEEECCCEEEEEEECHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEC WNIFRVSNWEVRQNKVSEIVIDLQKFIGF EEEEEECCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA