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The map label for this gene is 17228140

Identifier: 17228140

GI number: 17228140

Start: 748097

End: 748750

Strand: Direct

Name: 17228140

Synonym: alr0644

Alternate gene names: NA

Gene position: 748097-748750 (Clockwise)

Preceding gene: 17228139

Following gene: 17228141

Centisome position: 11.66

GC content: 43.73

Gene sequence:

>654_bases
ATGAAAGTTAATTTACATACCCCAGTTGAAGACGTACAAATCCAAATTATTCCCTTAATTGACGTTGTTTTTTGTATTCT
GACCTTCTTTTTATTGGCAGCTTTGCAATTTACTCGACAGCAAGCTATCAATGTTGACTTGCCAAAAGCCAGTACAAGTA
CAGCCGCCGGCATAAATTCCACAGGAGGTAGCCAAATTGTTAGTGTAGATGCTGTTGGTAATACTTATATAGAAAAAGAA
CTGGTAAGAAGAGACGAGTTAGCACAAAGATTAAGACAATACGTACAAGCAAACCCTAGTGGTGTTTTAGTCCTCAACGC
TTCACGCACAGCTACCTATAACGATGTCGTGGAGGTTTTAGATTTGTTGCGGCAAGTGGGAGGCGATCGCGTATCCTTAG
GAATTATTCCTACTTCTGCCCAAACCCAACCCAATTTTTCCAATTTCCCCATTAATCCCGGTGTAGCACCCATACCCAAC
ACCGCACCAATCCCAGGAATTAATCCCCCACCCAGTGAACTTACCCCCCAATTACCTACAGACCCTAATCAACCTCCAAG
CGGACAAGGTACTATTCCTCTAAATCCTGACTTTTCTCCAGTCGTTCCTCAGGTTCCCGTAGCACCAGGCACTAATCCTG
CACCGCAACAATGA

Upstream 100 bases:

>100_bases
ATTCGTCATTTAATTATTAGTTCCCTTACACCCTTATACCCTTACACCCCTTCCTAAGAGACAAAAAAGCAAACCCAATA
TTAGGCATAAGCATGAAACG

Downstream 100 bases:

>100_bases
GGTGGGTAATTGGTAATTGGTAATGGGGAATACAGTCAACATTCTCTTTTCCCCCTACTCCCTCATCTCCCCTGAAACCT
AAAGATATGTAGAATATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKVNLHTPVEDVQIQIIPLIDVVFCILTFFLLAALQFTRQQAINVDLPKASTSTAAGINSTGGSQIVSVDAVGNTYIEKE
LVRRDELAQRLRQYVQANPSGVLVLNASRTATYNDVVEVLDLLRQVGGDRVSLGIIPTSAQTQPNFSNFPINPGVAPIPN
TAPIPGINPPPSELTPQLPTDPNQPPSGQGTIPLNPDFSPVVPQVPVAPGTNPAPQQ

Sequences:

>Translated_217_residues
MKVNLHTPVEDVQIQIIPLIDVVFCILTFFLLAALQFTRQQAINVDLPKASTSTAAGINSTGGSQIVSVDAVGNTYIEKE
LVRRDELAQRLRQYVQANPSGVLVLNASRTATYNDVVEVLDLLRQVGGDRVSLGIIPTSAQTQPNFSNFPINPGVAPIPN
TAPIPGINPPPSELTPQLPTDPNQPPSGQGTIPLNPDFSPVVPQVPVAPGTNPAPQQ
>Mature_217_residues
MKVNLHTPVEDVQIQIIPLIDVVFCILTFFLLAALQFTRQQAINVDLPKASTSTAAGINSTGGSQIVSVDAVGNTYIEKE
LVRRDELAQRLRQYVQANPSGVLVLNASRTATYNDVVEVLDLLRQVGGDRVSLGIIPTSAQTQPNFSNFPINPGVAPIPN
TAPIPGINPPPSELTPQLPTDPNQPPSGQGTIPLNPDFSPVVPQVPVAPGTNPAPQQ

Specific function: Unknown

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 23076; Mature: 23076

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNLHTPVEDVQIQIIPLIDVVFCILTFFLLAALQFTRQQAINVDLPKASTSTAAGINS
CEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
TGGSQIVSVDAVGNTYIEKELVRRDELAQRLRQYVQANPSGVLVLNASRTATYNDVVEVL
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
DLLRQVGGDRVSLGIIPTSAQTQPNFSNFPINPGVAPIPNTAPIPGINPPPSELTPQLPT
HHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
DPNQPPSGQGTIPLNPDFSPVVPQVPVAPGTNPAPQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKVNLHTPVEDVQIQIIPLIDVVFCILTFFLLAALQFTRQQAINVDLPKASTSTAAGINS
CEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
TGGSQIVSVDAVGNTYIEKELVRRDELAQRLRQYVQANPSGVLVLNASRTATYNDVVEVL
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
DLLRQVGGDRVSLGIIPTSAQTQPNFSNFPINPGVAPIPNTAPIPGINPPPSELTPQLPT
HHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
DPNQPPSGQGTIPLNPDFSPVVPQVPVAPGTNPAPQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]