Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17228039

Identifier: 17228039

GI number: 17228039

Start: 635773

End: 636699

Strand: Direct

Name: 17228039

Synonym: alr0543

Alternate gene names: NA

Gene position: 635773-636699 (Clockwise)

Preceding gene: 17228037

Following gene: 17228041

Centisome position: 9.91

GC content: 40.45

Gene sequence:

>927_bases
ATGGAAAATAGTAGTGTGAGAATTGTATCTCTGATTCCTAGTGCAACAGAGATTTTAGCAAACTTGGGTTTGAGTGATGC
TATTGTTGGGCGATCGCATGAATGTGATTATCCCCCAGAAATCCAAAATCGTCCAATTTGTACGCAAGCACGGTTAAATA
GTCAGGCTGCCAGCAGCGAGATTCATCATGAAGTGAATAATTTACTGCAATCTGCGCTGAGTATTTATCAGGTAAAGTTA
GAGGTTTTGGAGCAATTACAACCTACCCATATTTTGACACAAGACCAGTGTGATGTCTGTGCAGTCAGCCTTAAAGATGT
AGAAAAAGCCGTTAAGGAACTTACCCAAAGTTCTCCCCAAATCATTTCATTACAACCTAATTTGCTTGAGGATGTATGGC
AGGATATTGAGCGCGTAGCTCATATCTTTGGTGTAGACTCAGTAAAAATATTAGATAACTTAGAGGCCCGTGTCAAAATT
TGTCAACAAAAAATTCAAGGCCTTTCTCTAGAAGAAGTACCTACGGTGGCTTGTATCGAGTGGACAGACCCACTTATGGC
CGCAGCGAATTGGATTCCTGAATTAGTCAACTTAGCTGGGGGACAAACACTATTTTCCCTTATCGGTCAGCCTTCTCCAC
ATCTGGAATGGGATAATTTGTTAGTTAGTAATCCAGATATTATAATTTTCATGCCTTGTGGCTTTAACCTACAACGAACT
CGTCAAGAAGCCCAATTATTCACTCAAAACCCAGAATGGAAAAAACTCCACGCCAGCCAAACTGGTAGAGTTTACATTGC
TGATGGTAATTCCTATTTCAACCGTCCAGGGCCCCGACTGGTAGATTCTCTAGAAATATTGTCCGAGATTTTACATCCAG
AAATTTTTGATTATGGTTACAAAGGTACTGCTTGGGAACCTTTATAA

Upstream 100 bases:

>100_bases
TTGATTTTCGCCACATAATCTCCCCTGAAGAAAGATACCCCAGAAGTAGAAGTCTGTAACAATTGAATTAAGAACACAGA
TGCTGTTGTAGAGGTGTCTA

Downstream 100 bases:

>100_bases
AGAAGCTGCTTGATTTAGCCATTCAATCAGCATTTTTAAGCTATGAGGTAATGCTGCTTCACCAACAATTATCGTGTGCG
TTTTACCATTATCTTCTAAA

Product: substrate-binding protein of ABC transporter

Products: NA

Alternate protein names: ABC Fe3+-Hydroxamate Transporter Periplasmic Component; ABC Transporter; MoxR-Like ATPases-Like; Fe3+ ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPICTQARLNSQAASSEIHHEVNNLLQSALSIYQVKL
EVLEQLQPTHILTQDQCDVCAVSLKDVEKAVKELTQSSPQIISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKI
CQQKIQGLSLEEVPTVACIEWTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWDNLLVSNPDIIIFMPCGFNLQRT
RQEAQLFTQNPEWKKLHASQTGRVYIADGNSYFNRPGPRLVDSLEILSEILHPEIFDYGYKGTAWEPL

Sequences:

>Translated_308_residues
MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPICTQARLNSQAASSEIHHEVNNLLQSALSIYQVKL
EVLEQLQPTHILTQDQCDVCAVSLKDVEKAVKELTQSSPQIISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKI
CQQKIQGLSLEEVPTVACIEWTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWDNLLVSNPDIIIFMPCGFNLQRT
RQEAQLFTQNPEWKKLHASQTGRVYIADGNSYFNRPGPRLVDSLEILSEILHPEIFDYGYKGTAWEPL
>Mature_308_residues
MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPICTQARLNSQAASSEIHHEVNNLLQSALSIYQVKL
EVLEQLQPTHILTQDQCDVCAVSLKDVEKAVKELTQSSPQIISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKI
CQQKIQGLSLEEVPTVACIEWTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWDNLLVSNPDIIIFMPCGFNLQRT
RQEAQLFTQNPEWKKLHASQTGRVYIADGNSYFNRPGPRLVDSLEILSEILHPEIFDYGYKGTAWEPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34478; Mature: 34478

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPICTQARLNSQAASSE
CCCCCEEEEEECCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHH
IHHEVNNLLQSALSIYQVKLEVLEQLQPTHILTQDQCDVCAVSLKDVEKAVKELTQSSPQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
IISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKICQQKIQGLSLEEVPTVACIE
EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEE
WTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWDNLLVSNPDIIIFMPCGFNLQRT
CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCCHHHH
RQEAQLFTQNPEWKKLHASQTGRVYIADGNSYFNRPGPRLVDSLEILSEILHPEIFDYGY
HHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCC
KGTAWEPL
CCCCCCCC
>Mature Secondary Structure
MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPICTQARLNSQAASSE
CCCCCEEEEEECCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHH
IHHEVNNLLQSALSIYQVKLEVLEQLQPTHILTQDQCDVCAVSLKDVEKAVKELTQSSPQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
IISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKICQQKIQGLSLEEVPTVACIE
EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEE
WTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWDNLLVSNPDIIIFMPCGFNLQRT
CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCCHHHH
RQEAQLFTQNPEWKKLHASQTGRVYIADGNSYFNRPGPRLVDSLEILSEILHPEIFDYGY
HHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCC
KGTAWEPL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA