| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228039
Identifier: 17228039
GI number: 17228039
Start: 635773
End: 636699
Strand: Direct
Name: 17228039
Synonym: alr0543
Alternate gene names: NA
Gene position: 635773-636699 (Clockwise)
Preceding gene: 17228037
Following gene: 17228041
Centisome position: 9.91
GC content: 40.45
Gene sequence:
>927_bases ATGGAAAATAGTAGTGTGAGAATTGTATCTCTGATTCCTAGTGCAACAGAGATTTTAGCAAACTTGGGTTTGAGTGATGC TATTGTTGGGCGATCGCATGAATGTGATTATCCCCCAGAAATCCAAAATCGTCCAATTTGTACGCAAGCACGGTTAAATA GTCAGGCTGCCAGCAGCGAGATTCATCATGAAGTGAATAATTTACTGCAATCTGCGCTGAGTATTTATCAGGTAAAGTTA GAGGTTTTGGAGCAATTACAACCTACCCATATTTTGACACAAGACCAGTGTGATGTCTGTGCAGTCAGCCTTAAAGATGT AGAAAAAGCCGTTAAGGAACTTACCCAAAGTTCTCCCCAAATCATTTCATTACAACCTAATTTGCTTGAGGATGTATGGC AGGATATTGAGCGCGTAGCTCATATCTTTGGTGTAGACTCAGTAAAAATATTAGATAACTTAGAGGCCCGTGTCAAAATT TGTCAACAAAAAATTCAAGGCCTTTCTCTAGAAGAAGTACCTACGGTGGCTTGTATCGAGTGGACAGACCCACTTATGGC CGCAGCGAATTGGATTCCTGAATTAGTCAACTTAGCTGGGGGACAAACACTATTTTCCCTTATCGGTCAGCCTTCTCCAC ATCTGGAATGGGATAATTTGTTAGTTAGTAATCCAGATATTATAATTTTCATGCCTTGTGGCTTTAACCTACAACGAACT CGTCAAGAAGCCCAATTATTCACTCAAAACCCAGAATGGAAAAAACTCCACGCCAGCCAAACTGGTAGAGTTTACATTGC TGATGGTAATTCCTATTTCAACCGTCCAGGGCCCCGACTGGTAGATTCTCTAGAAATATTGTCCGAGATTTTACATCCAG AAATTTTTGATTATGGTTACAAAGGTACTGCTTGGGAACCTTTATAA
Upstream 100 bases:
>100_bases TTGATTTTCGCCACATAATCTCCCCTGAAGAAAGATACCCCAGAAGTAGAAGTCTGTAACAATTGAATTAAGAACACAGA TGCTGTTGTAGAGGTGTCTA
Downstream 100 bases:
>100_bases AGAAGCTGCTTGATTTAGCCATTCAATCAGCATTTTTAAGCTATGAGGTAATGCTGCTTCACCAACAATTATCGTGTGCG TTTTACCATTATCTTCTAAA
Product: substrate-binding protein of ABC transporter
Products: NA
Alternate protein names: ABC Fe3+-Hydroxamate Transporter Periplasmic Component; ABC Transporter; MoxR-Like ATPases-Like; Fe3+ ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPICTQARLNSQAASSEIHHEVNNLLQSALSIYQVKL EVLEQLQPTHILTQDQCDVCAVSLKDVEKAVKELTQSSPQIISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKI CQQKIQGLSLEEVPTVACIEWTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWDNLLVSNPDIIIFMPCGFNLQRT RQEAQLFTQNPEWKKLHASQTGRVYIADGNSYFNRPGPRLVDSLEILSEILHPEIFDYGYKGTAWEPL
Sequences:
>Translated_308_residues MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPICTQARLNSQAASSEIHHEVNNLLQSALSIYQVKL EVLEQLQPTHILTQDQCDVCAVSLKDVEKAVKELTQSSPQIISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKI CQQKIQGLSLEEVPTVACIEWTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWDNLLVSNPDIIIFMPCGFNLQRT RQEAQLFTQNPEWKKLHASQTGRVYIADGNSYFNRPGPRLVDSLEILSEILHPEIFDYGYKGTAWEPL >Mature_308_residues MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPICTQARLNSQAASSEIHHEVNNLLQSALSIYQVKL EVLEQLQPTHILTQDQCDVCAVSLKDVEKAVKELTQSSPQIISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKI CQQKIQGLSLEEVPTVACIEWTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWDNLLVSNPDIIIFMPCGFNLQRT RQEAQLFTQNPEWKKLHASQTGRVYIADGNSYFNRPGPRLVDSLEILSEILHPEIFDYGYKGTAWEPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34478; Mature: 34478
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPICTQARLNSQAASSE CCCCCEEEEEECCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHH IHHEVNNLLQSALSIYQVKLEVLEQLQPTHILTQDQCDVCAVSLKDVEKAVKELTQSSPQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC IISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKICQQKIQGLSLEEVPTVACIE EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEE WTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWDNLLVSNPDIIIFMPCGFNLQRT CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCCHHHH RQEAQLFTQNPEWKKLHASQTGRVYIADGNSYFNRPGPRLVDSLEILSEILHPEIFDYGY HHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCC KGTAWEPL CCCCCCCC >Mature Secondary Structure MENSSVRIVSLIPSATEILANLGLSDAIVGRSHECDYPPEIQNRPICTQARLNSQAASSE CCCCCEEEEEECCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHH IHHEVNNLLQSALSIYQVKLEVLEQLQPTHILTQDQCDVCAVSLKDVEKAVKELTQSSPQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC IISLQPNLLEDVWQDIERVAHIFGVDSVKILDNLEARVKICQQKIQGLSLEEVPTVACIE EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEE WTDPLMAAANWIPELVNLAGGQTLFSLIGQPSPHLEWDNLLVSNPDIIIFMPCGFNLQRT CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCCHHHH RQEAQLFTQNPEWKKLHASQTGRVYIADGNSYFNRPGPRLVDSLEILSEILHPEIFDYGY HHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCC KGTAWEPL CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA