| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17227932
Identifier: 17227932
GI number: 17227932
Start: 514358
End: 515770
Strand: Direct
Name: 17227932
Synonym: alr0436
Alternate gene names: NA
Gene position: 514358-515770 (Clockwise)
Preceding gene: 17227929
Following gene: 17227936
Centisome position: 8.02
GC content: 44.87
Gene sequence:
>1413_bases ATGCCAAATACGCTATTTTCCCCTTTATTTATACTTGCATTAGGACTTACTCTTACTCAAACTATCGGCTGCACAAATAA TCCAGATGATTCCGCCGTTGCCCAAACTTCACCTAAAGCAGAACCTCAAATTGTTGTAGAACCAGGAGAAATCAGGGCTT TACCAGGAAAGTTAGATAACATCCCTGTATTTAACAGTAATAGCCCAGAGTGGGTAAAAACTGAGGGAATTTTGCTGTCT ACTTTCCCCACAAATGGTAAAAAAACACCAGCAGCACACCTCAATTTTCCTTTTCAGGGACGGTTTGATTTATTCGCTCA CCATTACACCCATACTCCCAAGGATTTACAAACGCTTTACTTGGGGGTCATTGTCAATAATCCTGGGAAAAAACCTGTGA CGGTCGATGTCTTGCAAGCAGCCAGTTATCTCATGCAGGATGCACCTTTTGTCACCTTACCCCCCTACATAGAAAATAAC GATGGTAAAGCCTACTCAGGGCCAGGGGCTAGGGCTGTTGCTGATGTGCTGCGGGGTGTGCGACAGGCTGATTTTCCTGC TAAGTTGGTGATTCCCCCTGGACAAAGCCGGATGTTGCTAAATCATCCTATTCCTGTGCGGAATTTGGCAAGACCTGTCA ATGGTCGATCAAGTTTTTTGCGTTTACGGAGTAGTGATAAAATTTATACAGCCAGTTTGGCTATGTTTGCCAAGAAGAAT ACTGATGGTTCTGACCGTGCGCCTACTATGGCTGAATGGCAAGCTTTACTCAACAATGGTAACTTTGCAGGGCCACGGGA TAAAACGCCTACCCCACCCAATGCTACCAGTGGGGCGTTGATTTATGGGCGCGTAGCTGGTGTTTCTCAAGGTTCCCAAT GGCAAGCCATTCTCACTGATAATCCCCAGGCAACTACTCTCACCATACCTCAAGTCGGCAAGGCTATTTCTTATCCTATA GTGACTCTGCGTGGTGGTCGATTAGGTACAGGACAAAGCCAAACCGCTAAGATGCTGGCGCGTTATCCTGATACAGCTTA TGAAGCGCATGGTAATTACGGTGTGGAATATAATCTCAACTTGCCCTTGAAGAATAACACTAACCAAACCCAAAAGGTGA CTGTTACTTTAGCAACACCGTTAAAGGAAGATAAGTTATCTCAAGGTGGTGTACGCTTTCGTAAACCTTCCCTAGACTTT CCCTTTTTCCGAGGTACAGTCAGGCTACGTTACTTTGATGACCAGGGAAAACAAAAGACGCGTTACGTACATTTATGGCA CAGAACCGGACAGGTTTTAGAACCATTAGTACAGTTTGTTATGCCACCATCAACTAGACGCAATGTGCAGGTAGATGTAA TTTATCCACCAGATTCCACACCACCCCAGATTTTGACTGTGAGAACTTTGTAG
Upstream 100 bases:
>100_bases ACTACGTTAATTATACCTGCATAAAAACAGCGATCGCTCTCAGAAATTAGCATACATAAAGTTGTAGTTAAAATAAGTTG TCTTTAACACCACATCTCCT
Downstream 100 bases:
>100_bases GATGAGAAATTTAAAAGCAATTTAAGCTAGAGACAAAGCACAATTTGCTATTTTTATTGATTGATACTGCCTAATATTGA GTAAAGAATACTTCTCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MPNTLFSPLFILALGLTLTQTIGCTNNPDDSAVAQTSPKAEPQIVVEPGEIRALPGKLDNIPVFNSNSPEWVKTEGILLS TFPTNGKKTPAAHLNFPFQGRFDLFAHHYTHTPKDLQTLYLGVIVNNPGKKPVTVDVLQAASYLMQDAPFVTLPPYIENN DGKAYSGPGARAVADVLRGVRQADFPAKLVIPPGQSRMLLNHPIPVRNLARPVNGRSSFLRLRSSDKIYTASLAMFAKKN TDGSDRAPTMAEWQALLNNGNFAGPRDKTPTPPNATSGALIYGRVAGVSQGSQWQAILTDNPQATTLTIPQVGKAISYPI VTLRGGRLGTGQSQTAKMLARYPDTAYEAHGNYGVEYNLNLPLKNNTNQTQKVTVTLATPLKEDKLSQGGVRFRKPSLDF PFFRGTVRLRYFDDQGKQKTRYVHLWHRTGQVLEPLVQFVMPPSTRRNVQVDVIYPPDSTPPQILTVRTL
Sequences:
>Translated_470_residues MPNTLFSPLFILALGLTLTQTIGCTNNPDDSAVAQTSPKAEPQIVVEPGEIRALPGKLDNIPVFNSNSPEWVKTEGILLS TFPTNGKKTPAAHLNFPFQGRFDLFAHHYTHTPKDLQTLYLGVIVNNPGKKPVTVDVLQAASYLMQDAPFVTLPPYIENN DGKAYSGPGARAVADVLRGVRQADFPAKLVIPPGQSRMLLNHPIPVRNLARPVNGRSSFLRLRSSDKIYTASLAMFAKKN TDGSDRAPTMAEWQALLNNGNFAGPRDKTPTPPNATSGALIYGRVAGVSQGSQWQAILTDNPQATTLTIPQVGKAISYPI VTLRGGRLGTGQSQTAKMLARYPDTAYEAHGNYGVEYNLNLPLKNNTNQTQKVTVTLATPLKEDKLSQGGVRFRKPSLDF PFFRGTVRLRYFDDQGKQKTRYVHLWHRTGQVLEPLVQFVMPPSTRRNVQVDVIYPPDSTPPQILTVRTL >Mature_469_residues PNTLFSPLFILALGLTLTQTIGCTNNPDDSAVAQTSPKAEPQIVVEPGEIRALPGKLDNIPVFNSNSPEWVKTEGILLST FPTNGKKTPAAHLNFPFQGRFDLFAHHYTHTPKDLQTLYLGVIVNNPGKKPVTVDVLQAASYLMQDAPFVTLPPYIENND GKAYSGPGARAVADVLRGVRQADFPAKLVIPPGQSRMLLNHPIPVRNLARPVNGRSSFLRLRSSDKIYTASLAMFAKKNT DGSDRAPTMAEWQALLNNGNFAGPRDKTPTPPNATSGALIYGRVAGVSQGSQWQAILTDNPQATTLTIPQVGKAISYPIV TLRGGRLGTGQSQTAKMLARYPDTAYEAHGNYGVEYNLNLPLKNNTNQTQKVTVTLATPLKEDKLSQGGVRFRKPSLDFP FFRGTVRLRYFDDQGKQKTRYVHLWHRTGQVLEPLVQFVMPPSTRRNVQVDVIYPPDSTPPQILTVRTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51600; Mature: 51468
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTLFSPLFILALGLTLTQTIGCTNNPDDSAVAQTSPKAEPQIVVEPGEIRALPGKLDN CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEEECCCEEECCCCCCC IPVFNSNSPEWVKTEGILLSTFPTNGKKTPAAHLNFPFQGRFDLFAHHYTHTPKDLQTLY CEEECCCCCCEEEECCEEEEECCCCCCCCCEEEECCCCCCCHHEEEECCCCCCHHHEEEE LGVIVNNPGKKPVTVDVLQAASYLMQDAPFVTLPPYIENNDGKAYSGPGARAVADVLRGV EEEEEECCCCCCEEHHHHHHHHHHHHCCCEEEECCEEECCCCCEECCCCHHHHHHHHHHH RQADFPAKLVIPPGQSRMLLNHPIPVRNLARPVNGRSSFLRLRSSDKIYTASLAMFAKKN HHCCCCEEEEECCCCCCEEEECCCCHHHHCCCCCCCCCEEEECCCCCEEEEEEEEEEECC TDGSDRAPTMAEWQALLNNGNFAGPRDKTPTPPNATSGALIYGRVAGVSQGSQWQAILTD CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEC NPQATTLTIPQVGKAISYPIVTLRGGRLGTGQSQTAKMLARYPDTAYEAHGNYGVEYNLN CCCEEEEECHHCCCHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEECCCCCCEEEEEE LPLKNNTNQTQKVTVTLATPLKEDKLSQGGVRFRKPSLDFPFFRGTVRLRYFDDQGKQKT ECCCCCCCCCEEEEEEEECCCCHHHHCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCE RYVHLWHRTGQVLEPLVQFVMPPSTRRNVQVDVIYPPDSTPPQILTVRTL EEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEC >Mature Secondary Structure PNTLFSPLFILALGLTLTQTIGCTNNPDDSAVAQTSPKAEPQIVVEPGEIRALPGKLDN CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEEECCCEEECCCCCCC IPVFNSNSPEWVKTEGILLSTFPTNGKKTPAAHLNFPFQGRFDLFAHHYTHTPKDLQTLY CEEECCCCCCEEEECCEEEEECCCCCCCCCEEEECCCCCCCHHEEEECCCCCCHHHEEEE LGVIVNNPGKKPVTVDVLQAASYLMQDAPFVTLPPYIENNDGKAYSGPGARAVADVLRGV EEEEEECCCCCCEEHHHHHHHHHHHHCCCEEEECCEEECCCCCEECCCCHHHHHHHHHHH RQADFPAKLVIPPGQSRMLLNHPIPVRNLARPVNGRSSFLRLRSSDKIYTASLAMFAKKN HHCCCCEEEEECCCCCCEEEECCCCHHHHCCCCCCCCCEEEECCCCCEEEEEEEEEEECC TDGSDRAPTMAEWQALLNNGNFAGPRDKTPTPPNATSGALIYGRVAGVSQGSQWQAILTD CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEC NPQATTLTIPQVGKAISYPIVTLRGGRLGTGQSQTAKMLARYPDTAYEAHGNYGVEYNLN CCCEEEEECHHCCCHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEECCCCCCEEEEEE LPLKNNTNQTQKVTVTLATPLKEDKLSQGGVRFRKPSLDFPFFRGTVRLRYFDDQGKQKT ECCCCCCCCCEEEEEEEECCCCHHHHCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCE RYVHLWHRTGQVLEPLVQFVMPPSTRRNVQVDVIYPPDSTPPQILTVRTL EEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA