| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17227854
Identifier: 17227854
GI number: 17227854
Start: 414886
End: 415137
Strand: Direct
Name: 17227854
Synonym: asr0358
Alternate gene names: NA
Gene position: 414886-415137 (Clockwise)
Preceding gene: 17227853
Following gene: 17227855
Centisome position: 6.47
GC content: 35.32
Gene sequence:
>252_bases GTGGGAAAACACGCCAAAGGTGTTAAGAGAATCGAAGCTATTGGCAAGACAGAACGAAGTTTATATACTTTGATGATTAA AGACAATGGTTGTGGATTCACTTCATTGTCTGAAAATAAAGGGATGAAGCAACTTAGAAATATTGCTAAAAAACTGGGAG GAAATTTTAGGTGTGAATCCCTTGATCCCAAGGGGACAATCTGTGAAGTTACATGGAAATTAACAAACAATAAGAAAAAC TATCTGAATTAG
Upstream 100 bases:
>100_bases TTAACGTCAAAGTCCGCACATTTGAGCCTATAGATGAAAAGTACTTAAATATAGAAAAAAACAAGAGTTATGTCTATTTT TAGAAGAAGCTTTATGTAAT
Downstream 100 bases:
>100_bases ATTTGATTATTGAAAATATTTAGGTATCTGTAGGTTGGGCATTGCCACCATACGTATATTTTGGCACTCAAGTATAAATC CTATATCATTATGATTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Chase2 Sensor Protein
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MGKHAKGVKRIEAIGKTERSLYTLMIKDNGCGFTSLSENKGMKQLRNIAKKLGGNFRCESLDPKGTICEVTWKLTNNKKN YLN
Sequences:
>Translated_83_residues MGKHAKGVKRIEAIGKTERSLYTLMIKDNGCGFTSLSENKGMKQLRNIAKKLGGNFRCESLDPKGTICEVTWKLTNNKKN YLN >Mature_82_residues GKHAKGVKRIEAIGKTERSLYTLMIKDNGCGFTSLSENKGMKQLRNIAKKLGGNFRCESLDPKGTICEVTWKLTNNKKNY LN
Specific function: Unknown
COG id: COG3920
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9321; Mature: 9190
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKHAKGVKRIEAIGKTERSLYTLMIKDNGCGFTSLSENKGMKQLRNIAKKLGGNFRCES CCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECC LDPKGTICEVTWKLTNNKKNYLN CCCCCCEEEEEEEEECCCCCCCC >Mature Secondary Structure GKHAKGVKRIEAIGKTERSLYTLMIKDNGCGFTSLSENKGMKQLRNIAKKLGGNFRCES CCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECC LDPKGTICEVTWKLTNNKKNYLN CCCCCCEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA