| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17227646
Identifier: 17227646
GI number: 17227646
Start: 153551
End: 154639
Strand: Direct
Name: 17227646
Synonym: alr0150
Alternate gene names: NA
Gene position: 153551-154639 (Clockwise)
Preceding gene: 17227645
Following gene: 17227649
Centisome position: 2.39
GC content: 37.01
Gene sequence:
>1089_bases ATGAAAAGAGTAGACGTTGAGAAAAGAACTATTTTAATTGGTTTGGCTGGTAGCCACGGGTATGGATTAAATCGCCCTGA TTCTGATTTGGATTTTCGGGGGGTGTTTATTGCACCTAAAAGGTATTATTTGGGATTTGACCACATAGAACAAAAGGATG CAGGTTGGGATGAGCCGGGAATATTTCCTTTGCTGGATGGGAATAAAGACACGGTTATATATGAATTAAGGAAAATACTC CAATTGTTATCGGGAGCTAATCCCAATGTTTTGGAGTTGTTATGGTTAAATGAATATCCTGTGTTAACGGATGTCGGACA ATATTTAATCAATCATCGGAAATTATTTTTAAGTAAAAAGGTTAAACATACTTACTCTGGGTATGCTTTTGCTCAAATTA AAAAGATGGAGACCCATCGTAAGTGGTTGTTAAATCCACCAGAGAAGAAACCACTACCATCTGATTTTGGCATAGAAGAT GAAGCACCCTTAATTAAGGATGATTTGAATGCTTTTTTGGAGTATCTTTATACTTTGATTAGGGGTAGGATTGAATTTCT AGAAGAAGCAGAACAATTATATAAGTTGTTAACTGCTGATATTGATTTTAAAGGAGTGCTAAAACAATATACTTTACCTG ATGAAACTTTAGAATATACGCAAAATTTAACTAATAGCCGTAAAGATTTTATTCGGTTGTTACAAAAAAGCCAAAATTAC CAAATAGCTTTGAGGGAATGGAAAGCTTATTTAAGTTGGCAAGAAAATCGTAACCCGGCTAGGGCAGAGATGGAAAGGAA GTCTGGTTTTGATCTCAAGCATGGGATGCACTGCATTCGCTTGTTACGCAGTGGGTTGGAAATATTAAAGACTGGAGAAA TAACTGTAGATAGGAGAGTTGCGGGTGATGTTGAGGATTTAAAAGCTATCCTCCAGGGTGAGTATTCTTATCAGCAGGTG ATGGAGATGGCTGATGATTTGGTTGCTCAGATGGATGCTGCTTATGAACATTCAACTATACCCCATAGGCCGGATTTAGA AGCAATTAATAATTTGTGTATGGAGTTAGTGGAAATGCAGGGTTGGTAA
Upstream 100 bases:
>100_bases GTACAGATACAGTTTTTGATGCCTATCCAGTGGAAAAGATATGGTAGGAAAACTGGCTCAAATAATTGGGTATAAAGAGC CTATATTTTAATTTATAGAT
Downstream 100 bases:
>100_bases TTGGGAATTGGTGATTGGGAATTGGAAATTGATGATTGGGAGTTGGTTATATACTGATGATTTTTTACTATTACCTATTA CCTATTACCTATTACCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MKRVDVEKRTILIGLAGSHGYGLNRPDSDLDFRGVFIAPKRYYLGFDHIEQKDAGWDEPGIFPLLDGNKDTVIYELRKIL QLLSGANPNVLELLWLNEYPVLTDVGQYLINHRKLFLSKKVKHTYSGYAFAQIKKMETHRKWLLNPPEKKPLPSDFGIED EAPLIKDDLNAFLEYLYTLIRGRIEFLEEAEQLYKLLTADIDFKGVLKQYTLPDETLEYTQNLTNSRKDFIRLLQKSQNY QIALREWKAYLSWQENRNPARAEMERKSGFDLKHGMHCIRLLRSGLEILKTGEITVDRRVAGDVEDLKAILQGEYSYQQV MEMADDLVAQMDAAYEHSTIPHRPDLEAINNLCMELVEMQGW
Sequences:
>Translated_362_residues MKRVDVEKRTILIGLAGSHGYGLNRPDSDLDFRGVFIAPKRYYLGFDHIEQKDAGWDEPGIFPLLDGNKDTVIYELRKIL QLLSGANPNVLELLWLNEYPVLTDVGQYLINHRKLFLSKKVKHTYSGYAFAQIKKMETHRKWLLNPPEKKPLPSDFGIED EAPLIKDDLNAFLEYLYTLIRGRIEFLEEAEQLYKLLTADIDFKGVLKQYTLPDETLEYTQNLTNSRKDFIRLLQKSQNY QIALREWKAYLSWQENRNPARAEMERKSGFDLKHGMHCIRLLRSGLEILKTGEITVDRRVAGDVEDLKAILQGEYSYQQV MEMADDLVAQMDAAYEHSTIPHRPDLEAINNLCMELVEMQGW >Mature_362_residues MKRVDVEKRTILIGLAGSHGYGLNRPDSDLDFRGVFIAPKRYYLGFDHIEQKDAGWDEPGIFPLLDGNKDTVIYELRKIL QLLSGANPNVLELLWLNEYPVLTDVGQYLINHRKLFLSKKVKHTYSGYAFAQIKKMETHRKWLLNPPEKKPLPSDFGIED EAPLIKDDLNAFLEYLYTLIRGRIEFLEEAEQLYKLLTADIDFKGVLKQYTLPDETLEYTQNLTNSRKDFIRLLQKSQNY QIALREWKAYLSWQENRNPARAEMERKSGFDLKHGMHCIRLLRSGLEILKTGEITVDRRVAGDVEDLKAILQGEYSYQQV MEMADDLVAQMDAAYEHSTIPHRPDLEAINNLCMELVEMQGW
Specific function: Unknown
COG id: COG3541
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42087; Mature: 42087
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVDVEKRTILIGLAGSHGYGLNRPDSDLDFRGVFIAPKRYYLGFDHIEQKDAGWDEPG CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHCCCCHHHHHCCCCCCCCC IFPLLDGNKDTVIYELRKILQLLSGANPNVLELLWLNEYPVLTDVGQYLINHRKLFLSKK EEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH VKHTYSGYAFAQIKKMETHRKWLLNPPEKKPLPSDFGIEDEAPLIKDDLNAFLEYLYTLI HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RGRIEFLEEAEQLYKLLTADIDFKGVLKQYTLPDETLEYTQNLTNSRKDFIRLLQKSQNY HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCC QIALREWKAYLSWQENRNPARAEMERKSGFDLKHGMHCIRLLRSGLEILKTGEITVDRRV EEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECHHH AGDVEDLKAILQGEYSYQQVMEMADDLVAQMDAAYEHSTIPHRPDLEAINNLCMELVEMQ CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC GW CC >Mature Secondary Structure MKRVDVEKRTILIGLAGSHGYGLNRPDSDLDFRGVFIAPKRYYLGFDHIEQKDAGWDEPG CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHCCCCHHHHHCCCCCCCCC IFPLLDGNKDTVIYELRKILQLLSGANPNVLELLWLNEYPVLTDVGQYLINHRKLFLSKK EEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH VKHTYSGYAFAQIKKMETHRKWLLNPPEKKPLPSDFGIEDEAPLIKDDLNAFLEYLYTLI HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RGRIEFLEEAEQLYKLLTADIDFKGVLKQYTLPDETLEYTQNLTNSRKDFIRLLQKSQNY HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCC QIALREWKAYLSWQENRNPARAEMERKSGFDLKHGMHCIRLLRSGLEILKTGEITVDRRV EEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECHHH AGDVEDLKAILQGEYSYQQVMEMADDLVAQMDAAYEHSTIPHRPDLEAINNLCMELVEMQ CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC GW CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA