| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is yebA [H]
Identifier: 17227599
GI number: 17227599
Start: 105949
End: 108288
Strand: Direct
Name: yebA [H]
Synonym: alr0103
Alternate gene names: 17227599
Gene position: 105949-108288 (Clockwise)
Preceding gene: 17227598
Following gene: 17227600
Centisome position: 1.65
GC content: 42.65
Gene sequence:
>2340_bases ATGTTTAAATTAACCAGGATGAATCAATTTTGGCGTTTACCTGTAAGTCTTGATTGGGGACAAAATCAGCAAGGTTCGCC TTTGATGGAAGTAGAAAATTCCATTTCGCTGCGGGTACTAGTGCTAGCGTTGGTAATTATTGGAATTGTGGCTATGGATA TTGCCGCAGGGACTGCATTCAGTTTCTGGGCAATACCCATAAGTGTAGTTGGGACAATTTGGGGTTATTATCATCGCCGC AAACCTAATATTCCCATCAAATTTTGCATTGCTATTGGAATGTTAATGGCACTGGGGGCTTTCTTTGGGCGATTATTTGG CGAATTGAACGATACGCGGTTGGCTTTAGCAGAATTGCTAATTCAATTACAAGTCCTCCACAGTTTTGATGTACCTCGTC GCAAAGACTTGGGTTATTCAATTGTGATTGGGTTGATTTTGTTGGGTGTGGCCGCAACATTAAGCCAAACTCTGGCATTC GCACCTGTTTTATTGTTGTTTTTAGCGATCGCCATTCCCACTTTAGTTATCAATTACCGTTCCCAATTAGGGTTGGGGAA TTCAAAAATCAAAAGTCAAAAGTCAAAAGAAACTAAATTATCCTCTGGGTTACCTACTTATTTTTTATTGTTTGGTGTAG TTGTTGGGTTAGGATTGGTAGTCTTTGCCTTATTACCACGATTCCCTGGCTATCAACTGCGGACTTTTCCTGTGAGTTCG CCTATCGAAGTCAACCAAAGTTTTACTGGCCGCAGCATTATTAATCCTGGTTATGTCCGTCAAGGTAATGCTGACAATCA AGGTAATGGTCGTGGTGAAAATGAACAAACTGGCAATGGTCAACCAGGAAAGGTAGATGATAGCTTCTACTACGGATTCA ATAACCAGATCAACCAAAACCTGCGGGGAGAGATGAAACCCAAGGTAGTGATGCGAGTGCGATCGCAAGCTGAGGGATTT TGGCGAGTTTTGGCGTTTGACCGTTACACAGGTAAGGGTTGGGATATTTCCCGCAATGATGATGTGACAACCCTGAGGCG ATCGCCTTGGTCTTATCAAATATATTTATCACCACCACCAATATCTGGCAAAACTAGGGAAGTAGTGCAGACTTACACTG TAGTGTCGGATTTGCCTAACCTGATTCCCGCTATGTCTTATCCCAGGGAAGTTTACTTTCCCACACCGATGATTGCTGTT GATAAAGAAGGTGGGTTACGCGCACCTGTAGGTTTATCTGAAGATTTGACCTATACAGTTATTTCCGACGTTCCTTACCG CGATCGCACTTTATTGGGGAAAGCTACTAACGATTATCCCCTGAATATCAAAAATTATTATCTACAAATACCCCCAGAAA TTGCCTCCAAAGTTAAGCAACGCACCGAAGAAATCTTAGCTAACTACAACCAAAAACAGGTCGGACAATCTGAAAAAGCT TTAACTTCCAGCTACGAAAAAGCTCTTTATTTAGCGCAATATCTCAAACAAAACTATTCCATTCCCGAAAATCCTTTAGG ATTGCCATATTTGAGTGAGCAGGAAGATTTAGTAGAAGCGTTTCTGTTCAAATATAAGGGTGGTTATCCAGATCACTTCT CCACAGTTCTGACGGTAATGCTACGGTCTATTGGTATCCCAGCACGATTAGTGGCTGGGTTCAGTGCGGGGGAATTCAAT CCATTTACGGGAATGTATGTTGTACGTAACACTGATGCTTACGCAATGACAGAAGTGTATTTCCCTAAATATGGTTGGTT TACTTTTGACCCAATTCCCAATCATCCCTTGATTCCGCCTTCAGTTGAAGATGTGCAAACCTTTAGCGTATTGCGGCAAT TTTGGCAGTGGGTGGCTGGATGGTTGCCTACTCCGGTGACAGGTTTGTTTAATACCATATTTGGGACATTATTTAGTTGG ATTGGTAGGGCGATCACTTGGTTTATTACTCTGTTTACTCAAGGTTGGTTTGGTGTATTAACTGGCTTGCTTGTGGGAAC AACCACAGCTTTCCTTGGTTGGTTAGGTTGGACACAGTGGAGAGAATGGCGTAACCATCGCCGATTACGTCAACTACCAC CAATGGAAAGCCTTTATCAACAAATGCTGCAATGGACAGCTAAAAAAGGTTTGGGTAAACATCCAGCCCAAACACCCTTA GAGTATGCCCAAGTAGCCTATCACCATCATGGAAGTACTACGGCCCAAGTTATAGATGAGATTTGTCAAGCTTATGTTGG CTGGCGGTATGGTGGTCAAAAGCCTAACCTAAATCAACTACGACAAAGATGGGAAGAGATAAAAAAGGTGGGTGGCGATC GGGTAAATAGTAGCCTGTAG
Upstream 100 bases:
>100_bases TTACTTTCGGGGAGTTCCTGTTTTCTTAGAGGAACTTCCCGAAAGTTTGTATCTATAAGCATCTACAAGCATCTACTTTA TTTCTTGACTGACGATAGAA
Downstream 100 bases:
>100_bases AGATACAAAGCTTTTTCTAAATTCACCTGGGGCGAGTGAAGCAAAAAGTCATATTGCTTCGCTCGCCTCAATTTTTTCAT TCTCAAGCCAGCCTAATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 779; Mature: 779
Protein sequence:
>779_residues MFKLTRMNQFWRLPVSLDWGQNQQGSPLMEVENSISLRVLVLALVIIGIVAMDIAAGTAFSFWAIPISVVGTIWGYYHRR KPNIPIKFCIAIGMLMALGAFFGRLFGELNDTRLALAELLIQLQVLHSFDVPRRKDLGYSIVIGLILLGVAATLSQTLAF APVLLLFLAIAIPTLVINYRSQLGLGNSKIKSQKSKETKLSSGLPTYFLLFGVVVGLGLVVFALLPRFPGYQLRTFPVSS PIEVNQSFTGRSIINPGYVRQGNADNQGNGRGENEQTGNGQPGKVDDSFYYGFNNQINQNLRGEMKPKVVMRVRSQAEGF WRVLAFDRYTGKGWDISRNDDVTTLRRSPWSYQIYLSPPPISGKTREVVQTYTVVSDLPNLIPAMSYPREVYFPTPMIAV DKEGGLRAPVGLSEDLTYTVISDVPYRDRTLLGKATNDYPLNIKNYYLQIPPEIASKVKQRTEEILANYNQKQVGQSEKA LTSSYEKALYLAQYLKQNYSIPENPLGLPYLSEQEDLVEAFLFKYKGGYPDHFSTVLTVMLRSIGIPARLVAGFSAGEFN PFTGMYVVRNTDAYAMTEVYFPKYGWFTFDPIPNHPLIPPSVEDVQTFSVLRQFWQWVAGWLPTPVTGLFNTIFGTLFSW IGRAITWFITLFTQGWFGVLTGLLVGTTTAFLGWLGWTQWREWRNHRRLRQLPPMESLYQQMLQWTAKKGLGKHPAQTPL EYAQVAYHHHGSTTAQVIDEICQAYVGWRYGGQKPNLNQLRQRWEEIKKVGGDRVNSSL
Sequences:
>Translated_779_residues MFKLTRMNQFWRLPVSLDWGQNQQGSPLMEVENSISLRVLVLALVIIGIVAMDIAAGTAFSFWAIPISVVGTIWGYYHRR KPNIPIKFCIAIGMLMALGAFFGRLFGELNDTRLALAELLIQLQVLHSFDVPRRKDLGYSIVIGLILLGVAATLSQTLAF APVLLLFLAIAIPTLVINYRSQLGLGNSKIKSQKSKETKLSSGLPTYFLLFGVVVGLGLVVFALLPRFPGYQLRTFPVSS PIEVNQSFTGRSIINPGYVRQGNADNQGNGRGENEQTGNGQPGKVDDSFYYGFNNQINQNLRGEMKPKVVMRVRSQAEGF WRVLAFDRYTGKGWDISRNDDVTTLRRSPWSYQIYLSPPPISGKTREVVQTYTVVSDLPNLIPAMSYPREVYFPTPMIAV DKEGGLRAPVGLSEDLTYTVISDVPYRDRTLLGKATNDYPLNIKNYYLQIPPEIASKVKQRTEEILANYNQKQVGQSEKA LTSSYEKALYLAQYLKQNYSIPENPLGLPYLSEQEDLVEAFLFKYKGGYPDHFSTVLTVMLRSIGIPARLVAGFSAGEFN PFTGMYVVRNTDAYAMTEVYFPKYGWFTFDPIPNHPLIPPSVEDVQTFSVLRQFWQWVAGWLPTPVTGLFNTIFGTLFSW IGRAITWFITLFTQGWFGVLTGLLVGTTTAFLGWLGWTQWREWRNHRRLRQLPPMESLYQQMLQWTAKKGLGKHPAQTPL EYAQVAYHHHGSTTAQVIDEICQAYVGWRYGGQKPNLNQLRQRWEEIKKVGGDRVNSSL >Mature_779_residues MFKLTRMNQFWRLPVSLDWGQNQQGSPLMEVENSISLRVLVLALVIIGIVAMDIAAGTAFSFWAIPISVVGTIWGYYHRR KPNIPIKFCIAIGMLMALGAFFGRLFGELNDTRLALAELLIQLQVLHSFDVPRRKDLGYSIVIGLILLGVAATLSQTLAF APVLLLFLAIAIPTLVINYRSQLGLGNSKIKSQKSKETKLSSGLPTYFLLFGVVVGLGLVVFALLPRFPGYQLRTFPVSS PIEVNQSFTGRSIINPGYVRQGNADNQGNGRGENEQTGNGQPGKVDDSFYYGFNNQINQNLRGEMKPKVVMRVRSQAEGF WRVLAFDRYTGKGWDISRNDDVTTLRRSPWSYQIYLSPPPISGKTREVVQTYTVVSDLPNLIPAMSYPREVYFPTPMIAV DKEGGLRAPVGLSEDLTYTVISDVPYRDRTLLGKATNDYPLNIKNYYLQIPPEIASKVKQRTEEILANYNQKQVGQSEKA LTSSYEKALYLAQYLKQNYSIPENPLGLPYLSEQEDLVEAFLFKYKGGYPDHFSTVLTVMLRSIGIPARLVAGFSAGEFN PFTGMYVVRNTDAYAMTEVYFPKYGWFTFDPIPNHPLIPPSVEDVQTFSVLRQFWQWVAGWLPTPVTGLFNTIFGTLFSW IGRAITWFITLFTQGWFGVLTGLLVGTTTAFLGWLGWTQWREWRNHRRLRQLPPMESLYQQMLQWTAKKGLGKHPAQTPL EYAQVAYHHHGSTTAQVIDEICQAYVGWRYGGQKPNLNQLRQRWEEIKKVGGDRVNSSL
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002931 [H]
Pfam domain/function: PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 87989; Mature: 87989
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKLTRMNQFWRLPVSLDWGQNQQGSPLMEVENSISLRVLVLALVIIGIVAMDIAAGTAF CCEECCCCHHEECCEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHH SFWAIPISVVGTIWGYYHRRKPNIPIKFCIAIGMLMALGAFFGRLFGELNDTRLALAELL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IQLQVLHSFDVPRRKDLGYSIVIGLILLGVAATLSQTLAFAPVLLLFLAIAIPTLVINYR HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQLGLGNSKIKSQKSKETKLSSGLPTYFLLFGVVVGLGLVVFALLPRFPGYQLRTFPVSS HHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC PIEVNQSFTGRSIINPGYVRQGNADNQGNGRGENEQTGNGQPGKVDDSFYYGFNNQINQN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHCCC LRGEMKPKVVMRVRSQAEGFWRVLAFDRYTGKGWDISRNDDVTTLRRSPWSYQIYLSPPP CCCCCCHHHHHHHHHHHHHHEEHHEEECCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCC ISGKTREVVQTYTVVSDLPNLIPAMSYPREVYFPTPMIAVDKEGGLRAPVGLSEDLTYTV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCEEEE ISDVPYRDRTLLGKATNDYPLNIKNYYLQIPPEIASKVKQRTEEILANYNQKQVGQSEKA ECCCCCCCCEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHCCCHHHH LTSSYEKALYLAQYLKQNYSIPENPLGLPYLSEQEDLVEAFLFKYKGGYPDHFSTVLTVM HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH LRSIGIPARLVAGFSAGEFNPFTGMYVVRNTDAYAMTEVYFPKYGWFTFDPIPNHPLIPP HHHCCCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEHEEECCCCCCEEECCCCCCCCCCC SVEDVQTFSVLRQFWQWVAGWLPTPVTGLFNTIFGTLFSWIGRAITWFITLFTQGWFGVL CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TGLLVGTTTAFLGWLGWTQWREWRNHRRLRQLPPMESLYQQMLQWTAKKGLGKHPAQTPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHH EYAQVAYHHHGSTTAQVIDEICQAYVGWRYGGQKPNLNQLRQRWEEIKKVGGDRVNSSL HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFKLTRMNQFWRLPVSLDWGQNQQGSPLMEVENSISLRVLVLALVIIGIVAMDIAAGTAF CCEECCCCHHEECCEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHH SFWAIPISVVGTIWGYYHRRKPNIPIKFCIAIGMLMALGAFFGRLFGELNDTRLALAELL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IQLQVLHSFDVPRRKDLGYSIVIGLILLGVAATLSQTLAFAPVLLLFLAIAIPTLVINYR HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQLGLGNSKIKSQKSKETKLSSGLPTYFLLFGVVVGLGLVVFALLPRFPGYQLRTFPVSS HHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC PIEVNQSFTGRSIINPGYVRQGNADNQGNGRGENEQTGNGQPGKVDDSFYYGFNNQINQN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHCCC LRGEMKPKVVMRVRSQAEGFWRVLAFDRYTGKGWDISRNDDVTTLRRSPWSYQIYLSPPP CCCCCCHHHHHHHHHHHHHHEEHHEEECCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCC ISGKTREVVQTYTVVSDLPNLIPAMSYPREVYFPTPMIAVDKEGGLRAPVGLSEDLTYTV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCEEEE ISDVPYRDRTLLGKATNDYPLNIKNYYLQIPPEIASKVKQRTEEILANYNQKQVGQSEKA ECCCCCCCCEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHCCCHHHH LTSSYEKALYLAQYLKQNYSIPENPLGLPYLSEQEDLVEAFLFKYKGGYPDHFSTVLTVM HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH LRSIGIPARLVAGFSAGEFNPFTGMYVVRNTDAYAMTEVYFPKYGWFTFDPIPNHPLIPP HHHCCCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEHEEECCCCCCEEECCCCCCCCCCC SVEDVQTFSVLRQFWQWVAGWLPTPVTGLFNTIFGTLFSWIGRAITWFITLFTQGWFGVL CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TGLLVGTTTAFLGWLGWTQWREWRNHRRLRQLPPMESLYQQMLQWTAKKGLGKHPAQTPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHH EYAQVAYHHHGSTTAQVIDEICQAYVGWRYGGQKPNLNQLRQRWEEIKKVGGDRVNSSL HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]