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The map label for this gene is ybhR [C]

Identifier: 17227572

GI number: 17227572

Start: 80974

End: 81747

Strand: Direct

Name: ybhR [C]

Synonym: alr0076

Alternate gene names: 17227572

Gene position: 80974-81747 (Clockwise)

Preceding gene: 17227571

Following gene: 17227573

Centisome position: 1.26

GC content: 38.37

Gene sequence:

>774_bases
ATGAAATATTGGCGTGAAACCATCGCAGTTACCAAACGTATTTTAATTGAACTGTTACGCCGTAGACGCAGTTTGATTTT
TTGGAGTATCTTCCCGATTTCAGTACTGACTTTGAGTGGTTTTATATTAGCAGAACGGGCGGAATTACCCCTAGCTGATG
CTTTTTCCTATGCTGCACCTTCAACTTTAGTCGGTGCTGCACTGTTCTTTAGTTGCTTGGGCGGTACTGTTTCTACTGTA
GTGGCGGAAAGAGAACAACAAACCCTCAAACGTCTTTTTCTCTCTCCCTTAAGTGGTTTATCTTATTTTTTGGGAATTTT
CCTGGCCCATAGTTGCATTGGTATTGGTCAGGCTTTATTAATTTATGCGATCGCTGCTTTTTGGGGCGCAACTTTTAAAG
GTTCAATTTTATTAGGATTGACCATTATTTTTCTAAGTATTGCTGCTTACGTTGGTTTGGGTTTTATTCTCGGTACACAA
TTAGCCAGGCGGATTGAAGATGTCAACTCTTTGGTAGCCGCCTTTGGCGTTCCTCTATTAATTCTGGGTGGAGCATTTTT
ACCGACTGCATTGTTTCCTCAAACCCTGATCAATATAGCTAAATATAATCCCATATATCACATGAATGAAGCTTTAGTTT
CTGTTTCTTCAAAAGGAGAAACAGTTGATAAAATAACTTCGCATATTGTTTTTTTATTAGCATTCGCTATAGTGATGACT
ATTGGTGGCTGGTTATCTTATCAACGAATGTTAGTTGTAGAAAAAAGATTGTAA

Upstream 100 bases:

>100_bases
GAGGGTGGTCAATAGTCGGTTGTCAGTAGTCAATAGTCAATAGTCAAATTTCTTCCTCCTACCTCCCCAGTCCCCAGTCC
CCAATCCCCAATCCCCAACG

Downstream 100 bases:

>100_bases
TTGAGTGAAAAATGTTAAATATTCATAATTTAAATAAATCCTATGGAGATCGTCATGTTCTTCAAGATTTGACTCTCAAT
ATTATTAACGGTGAAGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-2 Type Transporter Superfamily Protein; ABC-2 Type Transporter; Multidrug ABC Transporter Permease Component; ABC-2 Type Transport System Permease Protein; ABC Transporter Permease Component

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKYWRETIAVTKRILIELLRRRRSLIFWSIFPISVLTLSGFILAERAELPLADAFSYAAPSTLVGAALFFSCLGGTVSTV
VAEREQQTLKRLFLSPLSGLSYFLGIFLAHSCIGIGQALLIYAIAAFWGATFKGSILLGLTIIFLSIAAYVGLGFILGTQ
LARRIEDVNSLVAAFGVPLLILGGAFLPTALFPQTLINIAKYNPIYHMNEALVSVSSKGETVDKITSHIVFLLAFAIVMT
IGGWLSYQRMLVVEKRL

Sequences:

>Translated_257_residues
MKYWRETIAVTKRILIELLRRRRSLIFWSIFPISVLTLSGFILAERAELPLADAFSYAAPSTLVGAALFFSCLGGTVSTV
VAEREQQTLKRLFLSPLSGLSYFLGIFLAHSCIGIGQALLIYAIAAFWGATFKGSILLGLTIIFLSIAAYVGLGFILGTQ
LARRIEDVNSLVAAFGVPLLILGGAFLPTALFPQTLINIAKYNPIYHMNEALVSVSSKGETVDKITSHIVFLLAFAIVMT
IGGWLSYQRMLVVEKRL
>Mature_257_residues
MKYWRETIAVTKRILIELLRRRRSLIFWSIFPISVLTLSGFILAERAELPLADAFSYAAPSTLVGAALFFSCLGGTVSTV
VAEREQQTLKRLFLSPLSGLSYFLGIFLAHSCIGIGQALLIYAIAAFWGATFKGSILLGLTIIFLSIAAYVGLGFILGTQ
LARRIEDVNSLVAAFGVPLLILGGAFLPTALFPQTLINIAKYNPIYHMNEALVSVSSKGETVDKITSHIVFLLAFAIVMT
IGGWLSYQRMLVVEKRL

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28140; Mature: 28140

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA