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The map label for this gene is ychA [C]

Identifier: 17227520

GI number: 17227520

Start: 21221

End: 22039

Strand: Direct

Name: ychA [C]

Synonym: alr0024

Alternate gene names: 17227520

Gene position: 21221-22039 (Clockwise)

Preceding gene: 17227519

Following gene: 17227525

Centisome position: 0.33

GC content: 42.0

Gene sequence:

>819_bases
ATGAATTTCTCCTCAGCACGACAATATTTTTATCAAGAGATTCAGCAATCTGAGGTGGATATTGACCTAGCCAGGGCAGC
TTTGTATATTGCCAAGGAAGAATATCCCAAACTGGATGTAGAAGAATATCTGAACGCACTCGATACAATGGCAATGGAAG
TTGAGGAACGCTTGCCATCCTCACGGTATCCGTTACGGGTGATTCAAGGCATTAATGAGTATTTGTATGACGATTTAGGA
TTTCTGGGGAATCAAAAAGATTATTACGACCCACGCAATAGTTTCTTCAATGAGGTAATTGACCGTCGAGTGGGTATTCC
GATTACTTTAGCCCTCGTTTATCTGGAGATTGCCCAAAGGATTGATTTTCCTATGGAGGGTGTGGGATTACCGGGACATT
TCCTCATCCGTCCAGCTATCTCGGATATGGAGATTTTTGTGGATGCGTTTAATCGTGGCGAGGTGATGTTTGCACAAGAT
TGTCAAGACAAGCTAAATCAAATGTTTAAAGAATCGGTAAATTTGCGACCGGAATTTTTAGCTAGAGTCAGCAAGCGGCA
GTTTTTGGCAAGAATGTTAACTAATCTCAAATATATTTATCTGAGACAGCAACAATTAGAAAAGAGCTTAGGTGTAGTTG
AGAGAATTTTATTACTGTTTCCTGAGACAACTTCAGAATTGCGCGATCGCGGTTTACTCTACTACCAACTAGGTCATTAT
CCGCAGGCTACCAATGACTTAGAATTGTACCTAGCCAATGTCCCCAACGCCGAAGATGCAGCCACTATTAGGCGATTGTT
GGGGGAGTTAGGGAGATGA

Upstream 100 bases:

>100_bases
CTGTTTAGACCTCTTTTTTCATTCTCTGTGTCTGTTTTGAGAGGAGTTTTGAAACGCGGAGGGGCGCAGAGGTTTAACTT
AATTAAGTGAGGCTTGGTTT

Downstream 100 bases:

>100_bases
AAGGGAAAACTATTAACTATTTATTTTGAATTTTGTTAGCGCAGCCTTGCCGTAGGTTATTTTGAATTTTGTAGCTTGCT
TCCCGTAGGGTATTTTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNFSSARQYFYQEIQQSEVDIDLARAALYIAKEEYPKLDVEEYLNALDTMAMEVEERLPSSRYPLRVIQGINEYLYDDLG
FLGNQKDYYDPRNSFFNEVIDRRVGIPITLALVYLEIAQRIDFPMEGVGLPGHFLIRPAISDMEIFVDAFNRGEVMFAQD
CQDKLNQMFKESVNLRPEFLARVSKRQFLARMLTNLKYIYLRQQQLEKSLGVVERILLLFPETTSELRDRGLLYYQLGHY
PQATNDLELYLANVPNAEDAATIRRLLGELGR

Sequences:

>Translated_272_residues
MNFSSARQYFYQEIQQSEVDIDLARAALYIAKEEYPKLDVEEYLNALDTMAMEVEERLPSSRYPLRVIQGINEYLYDDLG
FLGNQKDYYDPRNSFFNEVIDRRVGIPITLALVYLEIAQRIDFPMEGVGLPGHFLIRPAISDMEIFVDAFNRGEVMFAQD
CQDKLNQMFKESVNLRPEFLARVSKRQFLARMLTNLKYIYLRQQQLEKSLGVVERILLLFPETTSELRDRGLLYYQLGHY
PQATNDLELYLANVPNAEDAATIRRLLGELGR
>Mature_272_residues
MNFSSARQYFYQEIQQSEVDIDLARAALYIAKEEYPKLDVEEYLNALDTMAMEVEERLPSSRYPLRVIQGINEYLYDDLG
FLGNQKDYYDPRNSFFNEVIDRRVGIPITLALVYLEIAQRIDFPMEGVGLPGHFLIRPAISDMEIFVDAFNRGEVMFAQD
CQDKLNQMFKESVNLRPEFLARVSKRQFLARMLTNLKYIYLRQQQLEKSLGVVERILLLFPETTSELRDRGLLYYQLGHY
PQATNDLELYLANVPNAEDAATIRRLLGELGR

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306500, Length=229, Percent_Identity=30.1310043668122, Blast_Score=98, Evalue=9e-21,
Organism=Homo sapiens, GI16306502, Length=221, Percent_Identity=31.2217194570136, Blast_Score=97, Evalue=1e-20,
Organism=Escherichia coli, GI1787465, Length=235, Percent_Identity=28.0851063829787, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31738; Mature: 31738

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFSSARQYFYQEIQQSEVDIDLARAALYIAKEEYPKLDVEEYLNALDTMAMEVEERLPS
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
SRYPLRVIQGINEYLYDDLGFLGNQKDYYDPRNSFFNEVIDRRVGIPITLALVYLEIAQR
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IDFPMEGVGLPGHFLIRPAISDMEIFVDAFNRGEVMFAQDCQDKLNQMFKESVNLRPEFL
CCCCCCCCCCCCHHEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHH
ARVSKRQFLARMLTNLKYIYLRQQQLEKSLGVVERILLLFPETTSELRDRGLLYYQLGHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECCCC
PQATNDLELYLANVPNAEDAATIRRLLGELGR
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNFSSARQYFYQEIQQSEVDIDLARAALYIAKEEYPKLDVEEYLNALDTMAMEVEERLPS
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
SRYPLRVIQGINEYLYDDLGFLGNQKDYYDPRNSFFNEVIDRRVGIPITLALVYLEIAQR
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IDFPMEGVGLPGHFLIRPAISDMEIFVDAFNRGEVMFAQDCQDKLNQMFKESVNLRPEFL
CCCCCCCCCCCCHHEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHH
ARVSKRQFLARMLTNLKYIYLRQQQLEKSLGVVERILLLFPETTSELRDRGLLYYQLGHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECCCC
PQATNDLELYLANVPNAEDAATIRRLLGELGR
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]