Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17227509

Identifier: 17227509

GI number: 17227509

Start: 11560

End: 11850

Strand: Direct

Name: 17227509

Synonym: asr0013

Alternate gene names: NA

Gene position: 11560-11850 (Clockwise)

Preceding gene: NA

Following gene: 17227510

Centisome position: 0.18

GC content: 34.71

Gene sequence:

>291_bases
ATGACAGCCAAAGTTCCGGGTTATACAACAGACCAAGGTTTTGCCATCATGATGGAACATTTATCACCTGGAAAAGGAGG
TCGTCATCGACAAACCATTTCTTATGGCAAATCACCTAATTTAGGTTTATCGCCTAGAGAAGTATTAGCAATAGAAATTT
GGGATGTGCGTTCTATTTACCTTCGTCATAATTTGTACAATAAATATATCCGTGAAAGCCTACAAATATTAATTAGATTG
AATCAATTAAAATGGAGAGGTCTTTTTGATAAAGGAAATACAACGTTATGA

Upstream 100 bases:

>100_bases
AATTGTTGGCGAAGGAAGAGTAGGTACTTATGGAGACTTACTTAAATTTGGACGCAGGGGTGACAACCTAACCCCGCATC
ATATACCATCTAATGCTTTT

Downstream 100 bases:

>100_bases
ATCAAGCTGAGTTAATAGCGATTTTAAAAGATAATTGTCTGATGCAAACGGAAGAAGAAACTGACAGGTTTGAAAATGCT
TTAAATGAACTGTTGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MTAKVPGYTTDQGFAIMMEHLSPGKGGRHRQTISYGKSPNLGLSPREVLAIEIWDVRSIYLRHNLYNKYIRESLQILIRL
NQLKWRGLFDKGNTTL

Sequences:

>Translated_96_residues
MTAKVPGYTTDQGFAIMMEHLSPGKGGRHRQTISYGKSPNLGLSPREVLAIEIWDVRSIYLRHNLYNKYIRESLQILIRL
NQLKWRGLFDKGNTTL
>Mature_95_residues
TAKVPGYTTDQGFAIMMEHLSPGKGGRHRQTISYGKSPNLGLSPREVLAIEIWDVRSIYLRHNLYNKYIRESLQILIRLN
QLKWRGLFDKGNTTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11074; Mature: 10943

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKVPGYTTDQGFAIMMEHLSPGKGGRHRQTISYGKSPNLGLSPREVLAIEIWDVRSIY
CCCCCCCCCCCCCCEEHEECCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCHHHHH
LRHNLYNKYIRESLQILIRLNQLKWRGLFDKGNTTL
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
>Mature Secondary Structure 
TAKVPGYTTDQGFAIMMEHLSPGKGGRHRQTISYGKSPNLGLSPREVLAIEIWDVRSIY
CCCCCCCCCCCCCEEHEECCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCHHHHH
LRHNLYNKYIRESLQILIRLNQLKWRGLFDKGNTTL
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA