Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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The map label for this gene is typA

Identifier: 60683676

GI number:

Start: 5052358

End: 5054157

Strand: Reverse

Name: typA

Synonym: BF4258

Alternate gene names: NA

Gene position: NA

Preceding gene: 60683680

Following gene: 60683671

Centisome position: NA

GC content: NA

Gene sequence:

>1800_bases
ATGCAAAATATTCGAAACATTGCAATTATTGCCCATGTTGACCATGGGAAAACGACTCTCGTCGATAAAATGCTTTTAGC
CGGAAACTTGTTTCGCGGCAACCAAACAAGCGGAGAATTAATTCTGGATAACAACGACTTGGAGCGTGAACGAGGGATAA
CGATCCTCTCTAAAAACGTTTCTATCAATTACAACGGAACTAAGATTAATATTATTGATACTCCGGGACACAGCGACTTC
GGTGGCGAAGTAGAGCGTGTGCTCAACATGGCCGACGGATGCATTCTGTTGGTTGATGCTTTTGAAGGCCCGATGCCGCA
AACGCGCTTTGTGCTGCAGAAAGCTTTGGAAATCGGATTGAAACCGATTGTTGTTATTAATAAGGTAGACAAACCGAACT
GTCGTCCGGACGAAGTACACGAGATGGTCTTCGACCTGATGTTCAGCCTGGATGCTACCGAAGAGCAACTTGATTTTCCG
ACAATCTATGGTTCGGCCAAGAATAACTGGATGAGTACGGACTGGAAAGAGCAGACGGACAGTATTGTGCCTTTGCTGGA
TTGTATTGTAGAGAACATTCCTGCTCCGGAGCAATTGGAGGGTACTCCTCAGATGCTGATCACTTCACTTGACTATTCTT
CATATACAGGCCGTATTGCTGTAGGGCGTGTTCATCGTGGTACACTGAAAGAAGGCATGAACGTGTCTTTGGCTAAGCGT
GACGGCAGCATTGTGAAATCTAAGATTAAAGAGGTTCATGTATTCGAAGGGCTGGGTCGTGTGAAGACGACTGAGGTCTC
TTCGGGAGATATTTGCGCTTTGGTAGGTATTGACGGATTCGAGATCGGAGATACGATCTGTGATTATGAAACTCCGGAAG
CATTGCCACCTATTGCTATCGATGAACCGACTATGAGTATGCTGTTTGCCATCAACGACTCTCCGTTCTATGGTAAAGAT
GGTAAATTTGTAACTTCACGTCATATCCATGATCGCCTGACCAAGGAATTGGATAAGAATCTGGCTTTGCGCGTACGTAA
GAGCGAAGAAGACGGTAAATGGGTTGTATCAGGCCGTGGTGTGCTTCACCTTTCTGTCTTGATCGAAACCATGCGTCGCG
AAGGTTACGAGTTACAGGTCGGACAGCCGCAAGTAATCTATAAAGAAATAGATGGAGTAAAATGTGAACCGATTGAGGAG
CTTACGATTAACGTACCTGAAGAATATTCAAGTAAGATCATCGATATGGTAACCCGCCGTAAAGGTGAGATGACTATGAT
GGAGAATACCGGTGAACGCATCAACCTTGAATTTGATATGCCTTCGCGTGGTATCATCGGTCTTCGTACGAATGTTCTGA
CGGCTTCGGCAGGTGAGGCTATCATGGCACACCGCTTTAAGGAATATCAGCCGTTCAAAGGAGACATAGAACGTCGTACC
AATGGTTCGATTATCGCTATGGAGAGTGGTACTGCATTTGCTTATGCTATCGACAAATTGCAGGATCGTGGTAAATTCTT
TATTTTCCCTCAGGAAGAGGTGTATGCAGGTCAGGTAGTGGGTGAGCATGCTCACGAAAAAGATTTGGTTGTAAATGTGA
CTAAGTCGAAGAAGTTGACTAATATGCGTGCTTCCGGTTCTGACGAGAAAGCCCGTTTGATTCCTCCTGTACAGTTCTCT
CTTGAAGAGGCCTTGGAATACATTAAGGAAGACGAATATGTAGAAGTTACTCCGAAAGCAATGCGTATGCGTAAGGTTAT
TCTGGATGAAACTGAACGTAAACGCGCCAATAAGAGCTAA

Upstream 100 bases:

>100_bases
TTATCTTTTATCCCACAATGAATTGCAGGAAATATTTTCTATAGTATCCCTTTTTTCTAATCCAATTTTTGTACCTTTGT
CGCCAAATAATAGGTATTAT

Downstream 100 bases:

>100_bases
TATTTGCGGATATCTATCTAACGAAAGGCTGTGTAATTTGGCACAGCCTTTTCTGTTTATATATGCTTTTTTTTCCTATA
TAATAATATAAAAAAGGACA

Product: putative GTP-binding elongation factor family protein TypA/BipA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>599_residues
MQNIRNIAIIAHVDHGKTTLVDKMLLAGNLFRGNQTSGELILDNNDLERERGITILSKNVSINYNGTKINIIDTPGHSDF
GGEVERVLNMADGCILLVDAFEGPMPQTRFVLQKALEIGLKPIVVINKVDKPNCRPDEVHEMVFDLMFSLDATEEQLDFP
TIYGSAKNNWMSTDWKEQTDSIVPLLDCIVENIPAPEQLEGTPQMLITSLDYSSYTGRIAVGRVHRGTLKEGMNVSLAKR
DGSIVKSKIKEVHVFEGLGRVKTTEVSSGDICALVGIDGFEIGDTICDYETPEALPPIAIDEPTMSMLFAINDSPFYGKD
GKFVTSRHIHDRLTKELDKNLALRVRKSEEDGKWVVSGRGVLHLSVLIETMRREGYELQVGQPQVIYKEIDGVKCEPIEE
LTINVPEEYSSKIIDMVTRRKGEMTMMENTGERINLEFDMPSRGIIGLRTNVLTASAGEAIMAHRFKEYQPFKGDIERRT
NGSIIAMESGTAFAYAIDKLQDRGKFFIFPQEEVYAGQVVGEHAHEKDLVVNVTKSKKLTNMRASGSDEKARLIPPVQFS
LEEALEYIKEDEYVEVTPKAMRMRKVILDETERKRANKS

Sequences:
NA

Specific function: NA

COG id: COG1217

COG function: function code T; Predicted membrane GTPase involved in stress response

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA