Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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Identifier: 60683581

GI number:

Start: 4900356

End: 4901834

Strand: Direct

Name: Not Available

Synonym: BF4160

Alternate gene names: NA

Gene position: NA

Preceding gene: 60683575

Following gene: 60683582

Centisome position: NA

GC content: NA

Gene sequence:

>1479_bases
ATGGCACAAGGTTCCCGTCAGATACAATCGCAGGCGCAGCAGCAGATACAAACGCTCTCACCGCAGCAGATTCTGGTAGT
GAAACTACTGGAGCTACCGGCTGTGGAACTGGAAGACCGTGTACATGCCGAACTGCTGGAGAATCCCGCCCTTGAAGAAG
GCAAAGAAGAAAGCACCTCCGACGAGACCACCCCTGCCGAAACCTCCGAAGGAGAGACGGAAGGCGATACGGACTATGAC
TCGCTGAGCGACTATCTGACCGAAGACGACATCCCCGACTATAAACTTCAGGAAAACAACCGCTCCAAAGGCGAGCAGGC
AGAAGAGATTCCGTTTTCGGACGCGACGTCATTCTACGAAATCCTGAGAGAACAGCTCGGCGAACGCAACCTGACCGAAC
ATCAGCGCGAACTGGCGGAATACCTGATCGGTTCGCTGGACGACGACGGCCTGCTCCGCAAATCCCTCGAAAGCATCGGT
GACGAACTGGCCATCTACGCCGGTATCAACGCTACGGAAGAGGAACTGGAGGAAGCCCTGAGAATCGTACAAGATTTCGA
CCCTCCCGGACTGGGCGCACGCAGCCTGCAGGAATGCCTGCTGATACAGATCCGCCGCAAAAAACAGTCCCACTGCACAG
ACCCTCTGCTGGAGACGGAAGAAGAAATCATCAGTGAATGTTACGAAGAGTTCACCCGCAAGCATTGGGAAAAGATCATC
AAAAAGCTGGGACTGGACGAAGAACACTTCTATAAGGCACTTGAAGAGATCACCAAGCTCAACCCCCGTCCGGGCGCATC
GCTGGGTGAAGCCATCGGACGGAACCTGCAACAGATCGTCCCCGATTTCATAGTAGACACCTACGATGACGGAACCATCA
ACATCAGCCTCAACAACCGCAATCTGCCGGAGCTGCGCATGAGCCGCGACTTCACGGAGATGGTCGAGGAACATACGAAG
AACAAGGCCAACCAATCGAAAGAATCGAAAGAGGCCATGATGTTCCTCAAGCAGAAGATGGACGCCGCACAAGGCTTCAT
CGACGCCGTGAAGCAACGCCAGAATACATTGATGACCACCATGCAGGCCATCATCGACCTGCAACGCCCCTTCTTCCTCG
AAGGCGACGAGTCATTGCTCCGCCCGATGATTCTGAAGGACGTGGCGGAACGCACCGGGCTGGACATCTCGACCATCTCA
CGCGTCAGCAACAGCAAATACGTGCAAACGAATTACGGCATTTATCCCCTGAAGTTCTTCTTCAGCGACGGATACACCAC
CGAAGACGGTGAAGAGATGTCGGTACGCGAGATACGGAAGATCCTGAAAGAATGCATCGACAGCGAGGACAAAAAGAAAC
CGCTGACCGATGACGAACTGGCCGAAATACTGAAAGAGAAAGGATATCCCATCGCACGCCGCACGGTGGCCAAGTACCGC
CAGCAACTCAACATTCCGGTAGCGAGACTGAGAAAATAA

Upstream 100 bases:

>100_bases
GGTTTTTCCTTTAACTCCTTTTATCGGATAAATCATTTCGCTATATCGAACAATTCATTACTTTTGTAGCGAGAAACAAA
AACTGTAAAGCATTAAACGT

Downstream 100 bases:

>100_bases
AAAAGCATAATAAAAGAAACAAAATGGCTGAAGAAGAGAAGATAGAGCAACATATCATAGCTGACAGGACACTGATCCGT
ACGGCCAGAATCATTTCGGG

Product: putative RNA polymerase sigma-54 factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>492_residues
MAQGSRQIQSQAQQQIQTLSPQQILVVKLLELPAVELEDRVHAELLENPALEEGKEESTSDETTPAETSEGETEGDTDYD
SLSDYLTEDDIPDYKLQENNRSKGEQAEEIPFSDATSFYEILREQLGERNLTEHQRELAEYLIGSLDDDGLLRKSLESIG
DELAIYAGINATEEELEEALRIVQDFDPPGLGARSLQECLLIQIRRKKQSHCTDPLLETEEEIISECYEEFTRKHWEKII
KKLGLDEEHFYKALEEITKLNPRPGASLGEAIGRNLQQIVPDFIVDTYDDGTINISLNNRNLPELRMSRDFTEMVEEHTK
NKANQSKESKEAMMFLKQKMDAAQGFIDAVKQRQNTLMTTMQAIIDLQRPFFLEGDESLLRPMILKDVAERTGLDISTIS
RVSNSKYVQTNYGIYPLKFFFSDGYTTEDGEEMSVREIRKILKECIDSEDKKKPLTDDELAEILKEKGYPIARRTVAKYR
QQLNIPVARLRK

Sequences:
NA

Specific function: NA

COG id: COG1508

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA