Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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The map label for this gene is pepD

Identifier: 60682548

GI number:

Start: 3581094

End: 3582560

Strand: Direct

Name: pepD

Synonym: BF3079

Alternate gene names: NA

Gene position: NA

Preceding gene: 60682542

Following gene: 60682549

Centisome position: NA

GC content: NA

Gene sequence:

>1467_bases
ATGGAAAAATCAGAACTGAAACCGGCCGGTGTATTTCACTTCTTCAATGAAATCTGCCAGGTGCCCCGTCCTTCAAAGAA
GGAAGAGAAGATGATCGCCTATTTAAAGGCGTTCGGAGAAAAACATAATTTAGAAACCAAAGTAGACGAAGCCGGCAACG
TGCTTATCAAAAAACCGGCAACACCGGGTAAAGAAAATCTGAAGACAGTGATTCTGCAATCGCACGTAGACATGGTGTGC
GAAAAGAATAATGATACGGACCATGACTTCCTGACCGATCCCATCGAAACGGAGATTGACGGAGAGTGGATGAAAGCCAA
AGGAACAACCTTGGGAGCCGACAACGGCATCGGAGTAGCGACCGAACTGGCCATTCTGGCTGACGACAGTATTGAACACG
GTCCTATCGAATGTCTGTTCACTGTAGATGAAGAGACAGGACTGACCGGTGCTTTCGCCTTGAAAGAAGGCTTTATGAGC
GGAGAAATTCTGCTTAATCTCGACTCGGAAGACGAAGGTGAACTTTACATCGGTTGTGCGGGCGGTATTGATACAGTGGC
CGAATTTCAATATGAAAATGAAATGACACCCATCAGCCACCTCTGCTTCCGCATAACCGTTAAAGGTCTGAAAGGCGGAC
ACTCCGGAGGGGATATACATCTGGGACGCGGTAATGCCAACAAGATACTGAACCGGTTTCTCTATCAGATGATGACTACT
TACCAGGAGGACTTCCACCTCTATGAATTCAACGGAGGTAATCTGCGTAACGCCATTCCGCGTGAAGCTTCGGCTGTATT
CTCCGTGCCCGAACATTACAAACATGACATACGTACAGCCTTGAACGTATTCACCGCCGAAATCGAAAACGAACTTCATC
GGGTGGAACCGGATCTGAACATTCTTCTTGAAACAGAGCCGCACCGCGACTGGTCCATCGACTCGAGTACTTCCTATCGG
CTGATTACTTCGCTATACGGTTGCCCGCACGGAGTATATGCCATGAGTCAAGATATTCCGGGACTGGTAGAAACTTCAAC
GAACCTGGCATCTGTAAAAATGAAGCCGGAAAACACCATCCGTATCGAAACCAGCCAGCGCAGTTCTATCCTTTCTTCTC
GCGACGATATAGCAACAACGGTCCGTGCCGTATTCAGACTCGCCGGTGCTCAGGTCAACTGGGGTGAAGGTTATCCGGGA
TGGAAACCCAATCCGGATTCGGAAATCCTAAAAGTGGCGGAAGAGTCATATAAACGCCTGTTCGGTGTTGATGCCAAAGT
AAAGGCAATCCATGCAGGACTGGAATGTGGCTTGTTCCTCGACAAATATCCTGCCCTGGATATGATTTCATTCGGCCCCA
CCTTGACAGGAGTTCACTCTCCGGACGAACGGATGCATATTCCTTCGGTAGATAAATTCTGGAAACATCTGCTGGATGTG
TTGGCACATATTCCGGCTAAGAACTAA

Upstream 100 bases:

>100_bases
ATAAAAAAAGAGAAACGAGTTCAAAATTCGCAAGTAAATTAACCATATTTAGCAATAAGGGGTTAAAATTGAATTTTTAA
TTCCATAAAAAGAAAAGAGA

Downstream 100 bases:

>100_bases
AGCTATTTCACCACAGAGGACACAGAGTTACACAGAGGAGACGGGTAATTGTTGATTATTAACAAAAAGGCTCTGTGTCA
CTCCGTATTACTCTGTATTA

Product: putative aminoacyl-histidine dipeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>488_residues
MEKSELKPAGVFHFFNEICQVPRPSKKEEKMIAYLKAFGEKHNLETKVDEAGNVLIKKPATPGKENLKTVILQSHVDMVC
EKNNDTDHDFLTDPIETEIDGEWMKAKGTTLGADNGIGVATELAILADDSIEHGPIECLFTVDEETGLTGAFALKEGFMS
GEILLNLDSEDEGELYIGCAGGIDTVAEFQYENEMTPISHLCFRITVKGLKGGHSGGDIHLGRGNANKILNRFLYQMMTT
YQEDFHLYEFNGGNLRNAIPREASAVFSVPEHYKHDIRTALNVFTAEIENELHRVEPDLNILLETEPHRDWSIDSSTSYR
LITSLYGCPHGVYAMSQDIPGLVETSTNLASVKMKPENTIRIETSQRSSILSSRDDIATTVRAVFRLAGAQVNWGEGYPG
WKPNPDSEILKVAEESYKRLFGVDAKVKAIHAGLECGLFLDKYPALDMISFGPTLTGVHSPDERMHIPSVDKFWKHLLDV
LAHIPAKN

Sequences:
NA

Specific function: NA

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA