Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 60681103

GI number:

Start: 1869493

End: 1870812

Strand: Direct

Name: Not Available

Synonym: BF1607

Alternate gene names: NA

Gene position: NA

Preceding gene: 60681098

Following gene: 60681104

Centisome position: NA

GC content: NA

Gene sequence:

>1320_bases
ATGAAACATTTTATATCATTTTGTACCTTTCTTCTTTTTTCAACTCTCTTGTTTGCACAAGCAGAGAGGTCGCTCGACGA
ATGTATCCGTATTGCATGGAAACAGAATCCGTCTTTACGGAATAGCGGGATAGATATCAAAGAAGCCCGGATGGATTACA
TCTCTTCTGTGGCGAGTTTCCTGCCCCGTGTCAGTGTATCGGCCGAAGCCGGACGTAACTTCGGGCGTTCCATCGACCCG
AATACCAACGGATATACCAACGATACCTTTGATGAAGGAACCGTCGGGCTGGACATGACCCTTTCGCTCTTTGAGGGTTT
CACCCGTATCAATCGGGTACGTTTTGAGAAGATGAACCGCAACCGGAGTGAGTGGGCTTTGAAAGAACGCCGTAACGAAC
TGGCCTGTCAGGTGACGGATGCCTATTATAAACTTCTGCTTGAAGAGCGGATGCTCGATCTGGCTTTAGAGCAGAGCCGC
CTTAGCGAGCGTTATCTCAAACAGACCGAGGCCTTCGTCGAGTTGGGATTGAAGTCGGTTTCTGATTTGCAGGAAGTCAA
AGCCCGTCGCGAAGGTGATATTTACCGCTATCAGGCCCGTCAGAATGGTTGTCGTCTGGCATTGCTCCGCTTGAAGCAGC
TATTGAATCTGCATGCCGAGGATACGCTGGCCGTACAAGATACTATCAACTACGAACTTCTTTCGGCCTATCCGCTGCCA
CAAACGGAAGAACTCTATACGCAATCTCTGGTGGCGATGCCTTCGATGCGGATGATGGAACTCAGGCAACGTGCAGCCCG
TAAGGAGTATGCCATGGCAGGAGGTAAATTTTCGCCAACCGTCTTTGCCCGCTTTTCAATGGCTTCCCGTTACCTCGATG
GTTTTTCTACCAAACAGTTGAACGACAATTTAGGCAAGTATATCGGTATCGGTATTTCCATCCCTCTGCTGAGCGGGCTG
GAACGACTGACCACCCTGCGCAAACACAAGTTGAATATATTCCGCCTCCGGAACGAGGAAGAACTGCAAAAGCAACAACT
CTATACGGAGGTGGAGCAAACGGTTCTTTCTCTCCGTTCCGGTTATGATGAATTCCGGCAAGTGTTGCAGCAGTTCAGAG
CCGAAGAGCTGGTACTGAAAGAATCCGAACGGAAATGGGAAGAGGGGCTTATCTCCGTCTTTCAGTTGATGGAGGCCCGC
AATCGCTTCATCTCCTCCAAAGCCGAGTTGGCGCGGGTACGCTTGCAGGTAGATATGACTTTGAAGATGGAAACCTATTA
TCGCACGGGGAGCTTCTGTACGTTGCCCGGTGAAGAGTGA

Upstream 100 bases:

>100_bases
GGCGTCCAGATATTGGACACTATTGTATATGGTTGAATTGTATCTATCTGATTATAAGTTGATTGTTACTTTTGGCACAG
CGTTTGCATATTAGATTGAC

Downstream 100 bases:

>100_bases
TGGACGAGTTGTACAACTCGTCGTATACCAGTTGCTCAACTCGTCATGTACCAGTTGTACAACTCGTACACCGTTTCTCT
ACGGCCCGATGATATGACCT

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>439_residues
MKHFISFCTFLLFSTLLFAQAERSLDECIRIAWKQNPSLRNSGIDIKEARMDYISSVASFLPRVSVSAEAGRNFGRSIDP
NTNGYTNDTFDEGTVGLDMTLSLFEGFTRINRVRFEKMNRNRSEWALKERRNELACQVTDAYYKLLLEERMLDLALEQSR
LSERYLKQTEAFVELGLKSVSDLQEVKARREGDIYRYQARQNGCRLALLRLKQLLNLHAEDTLAVQDTINYELLSAYPLP
QTEELYTQSLVAMPSMRMMELRQRAARKEYAMAGGKFSPTVFARFSMASRYLDGFSTKQLNDNLGKYIGIGISIPLLSGL
ERLTTLRKHKLNIFRLRNEEELQKQQLYTEVEQTVLSLRSGYDEFRQVLQQFRAEELVLKESERKWEEGLISVFQLMEAR
NRFISSKAELARVRLQVDMTLKMETYYRTGSFCTLPGEE

Sequences:
NA

Specific function: NA

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA