Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 60680867

GI number:

Start: 1613806

End: 1619400

Strand: Reverse

Name: Not Available

Synonym: BF1351

Alternate gene names: NA

Gene position: NA

Preceding gene: 60680868

Following gene: 60680866

Centisome position: NA

GC content: NA

Gene sequence:

>5595_bases
ATGAAAGGAAAAAAGAATCTTTTAATTCTATTCTCCTGTGTTCTTACAGTAATTATCGCAGGACTGTTCGCTTGCACACG
CAGCGCAAAAGAAATTATTCCGTCATCGGAATATGCTCCTTATGTCAATGCTTATACAGGTGGAGTCATTTCTCAATCTT
CTCCCATACGAATCGAACTGACTCAAGATCAACCAATGGTAGACCTTAACAATGAACTGAAAGACTGTCCGTTCAGTTTT
ACTCCATCGTTAAAAGGCAAAGCTTATTGGGTGAGTAATAACACCATCGAATTTCTTCCGGAAGAAGGAGAACTAAAGCC
GGGCAAGTTATATCAAGGCTCGTTCCAACTAGGCGATTTTGTCGAAGTGGATAGCAAATTGAAAGTTTTCGATTTCTCTT
TCCGGGTACAAGAAAGTAATTTCACACTGCATACCGCTCCATTGGAAATAGCCTCTTCTTCACCCGATAAGGTAACCGTA
AAGGGAGAAATCCGTTTTAGTGATAAAATGACTAAAGAACAAGTTGAAAAAATACTTTCCACTAACGGTACCTCTACAAT
CACCATAGGATCCACATCTAATCCATTAGAATATAGTTTCATTATCAGTAATATCCAAAGAAAAGAACAGGATTACGATC
TTAAAATTACAGCAGACGGGGAACCTGTCGGAATGGACAGGAAACAAAGTGAGTCCATTACGATTCCTGCCAAAGACAGC
TTCCGTTTCCTTTCCGCCGAACGTATCAGTCAGCCTGAGAACGGGATACAAATCGTCTTCTCTGATCCGGTTTCTGATAC
TCAGGATTTAAAAGGTCTAATCGAAATACCCGAGATTCCATCCTATATTTTCCAGATTACGGATAATAAGGTAAATGTTT
ATTTTGAAGCCGGTCATCTCAGTAAACTGACCCTGAAAATACATGAAGGAGTGAAAAACAATCAAGGCAAAGCATTGGGC
GGTTCCCATTCTATCTCTTTCAGCGAACTGAACCTGAAACCTCAAGTCGAAATATCTTCTGCAGGTGCCATCATTCCCGA
TTCAAAAAATCTTGTAATTCCTTTCCGGGCTGTCAGTCTGTATGCTGTAGACCTACGGGTTATCCGCATTTTTGAGAACA
ATGTGCTAATGTTTATGCAAAATAACTCACTGTCCTCGGCCAACGAACTAAGACGATCGGGAAGACTGGTTTATAAAAAG
ACACTGTTTTTGGGTAAAGATCCTTCAAAAGATCTCCATAAATGGGAAAACTATTCCATCGACCTGGCAGGCCTGATTCA
TCAGGAACCGGGTGCTATTTATCGTGTTATCCTATCCTTCAAGCAGGAATATTCGGCTTATCCTTGCGGCAGTGGTGAGA
ATCCGAAAATGCAATTTTCCGAAGAAACCGAATCTCTGACCAAGGTCAAATCTGATATCCTTTCGGAAGAAGATGAAGCC
GTCTGGGACAAACCGGAAACATATTATTACTTCAGCGGGAATGAAAATGCCGACTGGAGCCAATATCGATGGGATGAACG
GGATAATCCCTGCCATCCGTCCTATTATATGACGTCCGACCGGATAGCAGCTTGTAACGTACTGGCTTCCAACATAGGTA
TGATCGTAAAACGTAATTCGATGAACAAACTTTGGATAGCCGTAAGCAATATTCTGGACACCAAACCGGTAGAAAAAGCT
AAAGTCATTGTCTACAACTTCCAGTTACAGCCTATCGGAGAAGCATTGACAGATGCGGAAGGTTTTGCAATAATAGAAAC
GAAAGGAACACCTTTTATTGTAGTGGCAGAATCGGAAAAACAGAAAGCTTATGTAAAAGTAGCCGATGGAGAAGAGCAGT
CTACCAGTCGTTTTGATGTAGGCGGCAAAGACATCCAAAAAGGCTTGAAAGGATTTGTATACGGTGAAAGAGGTGTATGG
CGACCAGGAGACACCTTGCATATCTCGTTTGTTCTGGAGGACCGTAACAAACGTATTCCGGATAAACATCCCGTAACTTT
GGAGCTTTACAATCCAAGAGGACAATTTTACAGTAAACAAATTTCAACCAATGGGCTGAATGGTTTCTATGCATTCAAGG
TCCCGACACAACCGGAAGATCCCACCGGATTATGGAACGCTTATGTAAAAGTAGGAGGTACCGCTTTCCACAAATCACTC
CGTGTGGAGACCATAAAGCCGAACCGTCTGAAAATAAACCTGAAACTGCCCGGAGAGATTCTGAAAGCTGCGGATAAAGA
AGTACAAGCACATCTTTCATCAGCTTGGCTGACCGGAGCAACGGCATCGCGTCTGAAAGCAAAAGTCGAAATGTCTCTGT
CGAAAGTCAATACACAATTCAAGAACTACGAGACATACATCTTTAATAATCCGGCAACAGAATTCACATCAATAAGAACC
GATATTTTCAACGGTACCCTGGATGAAAATGGTAATACCGGGTTCATGCTGAAACTTCCGACCTCTGAGAATGCTCCGGG
AATGCTTCGTGCCAATATCACGACTCAGGTATTCGAACCGGGCGGAGATGCCAGTATCCAGACTCTGTCAGTTCCCTACT
CTCCTTTCCCGTCATACGTGGGTATCAATCTGAACCAGCCACAAGGCAGATATATCGAAACAGACAAAGAGCATATTTTT
GATATCGTAACGGTCAACTCCGACGGAAAGCCGATAAATCGTTCCGGTCTGGAATACAAAATATACCGCATCAGTTGGAG
TTGGTGGTGGGAAAACGACAACGAATCATTTGAAACATACATCAACAGCAGTTCCATCACCCCCGTAGCTACGGGAAGAC
TCAACACAACAGGCGGCAAAGGACAATTCAGTTTCAAAGTGAATTATCCGGATTGGGGACGCTATTTGGTTTACGTCAAA
GACCGTGAAAGCGGACATGCTACAGGAGGTACCATCTACGTGGACTGGCCTGACTGGCGAGGGCGTTCTAATAAGAGTGA
CCCGAGTGGCATCAAAATGTTATCTTTTTCCATTGACAAAGACTCTTACGAACCGGGAGAAACCGTAACAGCCATATTAC
CGGCATCTGCCGGTGGAAGGGCCCTGGTTACACTCGAAAACGGTTCGTCTGTAATTCAACGGGAATGGATCGAGGTATCA
GGGAAAGAAGACACTAAATATCAATTTAAGGTAACCCCTGAAATGGCTCCGAATGTTTATCTCCATATCAGCTTGCTACA
GCCCCATGCACAGACGGTGAACGATCTTCCTATCCGGATGTACGGCATTATGCCGGTATTCGTGACCGACAAGCAAACCG
TTCTTGAACCGCAAATCAAGATGCCGGAAGTACTTCGTCCCGAACAGGCATTCAACCTTACCATAAACGAGAAGCATGGC
AGGCCGATGACATATACACTTGCCATTGTAGATGACGGTCTATTAGACTTGACCAATTTCAAGACACCGGATCCCTGGAA
TAATTTTTATGCCCGCGAAGCATTGGGAATCCGTACGTGGGATATGTACGACGATGTATTAGGAGCCACGGCAGGAAGCT
ATGGATCAATGTTCAGCACAGGTGGTGACGAGACACTGAAGCCATCGGACCCAAAAGCGAACCGCTTCAAACCTGTTGTG
AAATTTATCGGTCCTTTCAGTATCGGTAAGGGGAAAAGCCGTACGCACCAAATCACTTTACCCATGTATGTAGGTTCTGT
CCGTGCTATGGTAGTAGCAGGTCAGGACGGAGCATACGGAAATGCCGAAAAGACAGTTCCGGTACGTACCCCTTTGATGA
TTCTTTCAACATTGCCACGAGTTTTGAGCACCAATGAAGAGATTGAAGTACCAGTCAACGTATTTGCATTGGAAAACAAT
GTAAAGAACGTCAACGTATCCATACAAGCTTCCGGTGCAGGAACACAAGTGACAGGTAACAAGCAACAAACGCTTACCTT
CACTCAAACGGGTGACCGCCTGATCTTTTTCAAGTTAAAGACAGGTACGAAAACCGGAAAAGCCACCATTCATCTTACTG
CCAACGGAAACGGACAAAACACCAAAGAGACCATTGAGATAGAGGTTCGTAATCCGAATCCGGTGGTCACCCTGCGTGAA
AGCCAATGGGTGGAAACCGGAAAGAGCGAAGAACTCAATTATCAGTTAAGCAGTGGCTCGGAAGGAAACAGTATACAGCT
CGAAGTCTCACGTATTCCGTCTGTCGACATCAGCCGCCGTTTTGACTTTCTCTACAATTATCAGCACAACTGTACGGAAC
AATTAACCTCTAAAGCTCTCCCTTTGCTATTTATCAGCCAGTTCAAAACAGTAGACAACGAAGAATCGGAAAAGATAAAA
GTCAATGTACAGGAAGCTATCCGTCAGTTATACGGACGCCAGCTACCGAACGGAGGTTTCGTTTATTGGCCCGGAAATGC
CTCGGCAGACGAGTGGATCACCTCCTATGCCGGTATGTTCCTGGTACTGGCACAAGAAAAGGGTTATGCAGTAAACAGTA
ATGTACTGAACAAATGGAAACGTTTCCAACGGGCAGCAGCCCAAAACTGGCAACCCGTTGCCCAAGAACAGAGCTGGTGG
TATTGGCAGGCAGATTTCCAGCAGGCCTTCCGCCTCTATACATTGGCCATGGCCGGAGCACCAGAACATGGAGCAATGAA
CCGCATGAAAGAACTGCCTACACTTTCGCAACAAGCCAAATGGCGTTTGGCAGCCGCTTATGCACTCAACGGTAAAGAAA
AAGCAGCCGGCGAACTGGTATTCAGTGCAAAAACGACTGTAGAACCCTATTCATCGAATAATTATGTATATGGTTCATCC
GACCGGGACGAAGCAATGATACTTGAAACGCTATTGCTAATGAATCGTCAGCGCGAAGCCATGGAACAAGCTAAAATCGT
TTCACATAATCTGACAAGAGAGACGTGGTTCAGTACACAGTCCACCGCTTTCTCACTGATGGCAATGGGACGTCTGGCAG
AAAAGTTGTCCGGCACATTGGATTTCAGTTGGACACTGAACGGAAAACAGCAACCGGCAGTAAAATCAGCAAAAGCAGTA
TACGAGACACTTATTTCCACTTCATCACGTGAAGGAAAGGTAATTCTGAAAAACAATGGAAAAGGAGCTTTGAATGCAGA
CCTGATCACACGGACCCAATTACTGAACGACACACTGCCTCCGATAGCCAATAACCTGCGGATAAGTGTAAAGTACGTTG
ATAATAACGGTTCACCGATAGATACGCATTCTCTGCATCAAGGAACAAATTTTATGGCAGTGGTAACTGTTGCCAATACC
AGCGGTACAACCGATTATACAAATCTGGCATTAACACACATCATCCCTGCCGGATGGGAGATTTTCAATGAACGAATGAC
AGGACAGATTAGCACTTCTGCTCCTTATAGCTATCAGGATATCCGCGATGACCGGATACTGACTTACTTTAATTTGCAAC
AGGGACAAGCCAAAACATTTACCGTCCGGTTGCAGGCAACGTATTCCGGTGACTTTGTCATGCCGGCCATCCAGTGTGAA
GCGATGTATGATGCCAATGTACAGGCAAGGACACAGGCAGGCAGAACTAAAGTTGTCAGACAAAGCATCGAATAA

Upstream 100 bases:

>100_bases
AGATGGAAGCTGGTTAAAGCCTAAAGTGAAATTCAGTACAGAGTAAAGAAATATAAATCATTGGTTGACAAAATAATAAT
AAACTAAACGCTTATTTGCT

Downstream 100 bases:

>100_bases
GAAAACTGATGAATCAGATTCTTAAGCCACACAATCTTCCCCCCTCCTTTCAAGGGAGGGGGTGGAAGATAAGTATCAAA
AGTTGGTGGAAACCTGCCCT

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1864_residues
MKGKKNLLILFSCVLTVIIAGLFACTRSAKEIIPSSEYAPYVNAYTGGVISQSSPIRIELTQDQPMVDLNNELKDCPFSF
TPSLKGKAYWVSNNTIEFLPEEGELKPGKLYQGSFQLGDFVEVDSKLKVFDFSFRVQESNFTLHTAPLEIASSSPDKVTV
KGEIRFSDKMTKEQVEKILSTNGTSTITIGSTSNPLEYSFIISNIQRKEQDYDLKITADGEPVGMDRKQSESITIPAKDS
FRFLSAERISQPENGIQIVFSDPVSDTQDLKGLIEIPEIPSYIFQITDNKVNVYFEAGHLSKLTLKIHEGVKNNQGKALG
GSHSISFSELNLKPQVEISSAGAIIPDSKNLVIPFRAVSLYAVDLRVIRIFENNVLMFMQNNSLSSANELRRSGRLVYKK
TLFLGKDPSKDLHKWENYSIDLAGLIHQEPGAIYRVILSFKQEYSAYPCGSGENPKMQFSEETESLTKVKSDILSEEDEA
VWDKPETYYYFSGNENADWSQYRWDERDNPCHPSYYMTSDRIAACNVLASNIGMIVKRNSMNKLWIAVSNILDTKPVEKA
KVIVYNFQLQPIGEALTDAEGFAIIETKGTPFIVVAESEKQKAYVKVADGEEQSTSRFDVGGKDIQKGLKGFVYGERGVW
RPGDTLHISFVLEDRNKRIPDKHPVTLELYNPRGQFYSKQISTNGLNGFYAFKVPTQPEDPTGLWNAYVKVGGTAFHKSL
RVETIKPNRLKINLKLPGEILKAADKEVQAHLSSAWLTGATASRLKAKVEMSLSKVNTQFKNYETYIFNNPATEFTSIRT
DIFNGTLDENGNTGFMLKLPTSENAPGMLRANITTQVFEPGGDASIQTLSVPYSPFPSYVGINLNQPQGRYIETDKEHIF
DIVTVNSDGKPINRSGLEYKIYRISWSWWWENDNESFETYINSSSITPVATGRLNTTGGKGQFSFKVNYPDWGRYLVYVK
DRESGHATGGTIYVDWPDWRGRSNKSDPSGIKMLSFSIDKDSYEPGETVTAILPASAGGRALVTLENGSSVIQREWIEVS
GKEDTKYQFKVTPEMAPNVYLHISLLQPHAQTVNDLPIRMYGIMPVFVTDKQTVLEPQIKMPEVLRPEQAFNLTINEKHG
RPMTYTLAIVDDGLLDLTNFKTPDPWNNFYAREALGIRTWDMYDDVLGATAGSYGSMFSTGGDETLKPSDPKANRFKPVV
KFIGPFSIGKGKSRTHQITLPMYVGSVRAMVVAGQDGAYGNAEKTVPVRTPLMILSTLPRVLSTNEEIEVPVNVFALENN
VKNVNVSIQASGAGTQVTGNKQQTLTFTQTGDRLIFFKLKTGTKTGKATIHLTANGNGQNTKETIEIEVRNPNPVVTLRE
SQWVETGKSEELNYQLSSGSEGNSIQLEVSRIPSVDISRRFDFLYNYQHNCTEQLTSKALPLLFISQFKTVDNEESEKIK
VNVQEAIRQLYGRQLPNGGFVYWPGNASADEWITSYAGMFLVLAQEKGYAVNSNVLNKWKRFQRAAAQNWQPVAQEQSWW
YWQADFQQAFRLYTLAMAGAPEHGAMNRMKELPTLSQQAKWRLAAAYALNGKEKAAGELVFSAKTTVEPYSSNNYVYGSS
DRDEAMILETLLLMNRQREAMEQAKIVSHNLTRETWFSTQSTAFSLMAMGRLAEKLSGTLDFSWTLNGKQQPAVKSAKAV
YETLISTSSREGKVILKNNGKGALNADLITRTQLLNDTLPPIANNLRISVKYVDNNGSPIDTHSLHQGTNFMAVVTVANT
SGTTDYTNLALTHIIPAGWEIFNERMTGQISTSAPYSYQDIRDDRILTYFNLQQGQAKTFTVRLQATYSGDFVMPAIQCE
AMYDANVQARTQAGRTKVVRQSIE

Sequences:
NA

Specific function: NA

COG id: COG2373

COG function: function code R; Large extracellular alpha-helical protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA