Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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Identifier: 60680335

GI number:

Start: 956632

End: 959331

Strand: Reverse

Name: Not Available

Synonym: BF0781

Alternate gene names: NA

Gene position: NA

Preceding gene: 60680337

Following gene: 60680334

Centisome position: NA

GC content: NA

Gene sequence:

>2700_bases
ATGAAACAACAAATCGGGAGACTTCTCTCCACTCTTCTTCTCGCAACATTTTCCTTAGGAATCACAGCAGGGGTCATCCA
GGGAACCATCATTGATAAACAGACCAAAGAACCCCTGACCGGAGCTACCGTACAGATTGCCGGAACCACGACCGGAACCG
TAGCCGATGTAGACGGTAACTACACACTGACGCTAAGCAACGGCACCTATACCATTGAAGTGAAATATATAGGATATAAA
ACACTCCGGATGAATGAAGTGAAAGTGAAAGCCAATGCGACACTGAACTTTGAACTGGAAGTAGACGCGCAAACGCTGGA
CGCCGTCACCGTAGTGGCCCGGAAAAACCTGGAAGGCGAAAAGGCTTTACTGCAAGAGAGACAGAAAGCAACGCTTGCCA
TCGAAAACATGGGAGCCAAAGAGATGACCCTGAAAGGTATATCGAACGTACAGGACGGAGTCAAGAAAATAACCGGTATC
TCCATTGCAAGCGCCGGACAACTGATAGTACGCGGACTGGGTGACCGGTACAGCACGACCACCCTGAACGGTTTGCCCAT
CGCCTCGCCCAACCCGGACAACAAGTTGATTCCGCTCGACCTCTTCCCGGCCTCTACCGTAAAGAACATCACCGTCAGTA
AAGTATATGCCGCCGGAGCCTTTGCCGACTATTCGGGCGCACATATCGACATCAGCACCAAGGAGAACACGGGAAGTGAC
TTTTTCTCCATCGGCTTCAACGTGGGCGGACGCTTCAACACTGTCGGAAAAGATTTCTATTATAGCGACCGGAAAGGCGG
ACTCTTCAGTACGGGAAACCTCAGGAATAAAGACCGGATTCTGGCTATGGGTAAAAGCGAGTTCCGCGATTACGCCCGCA
ACAATGACCCGTTCGGCACAAACTTCGCTATCAGCAAGCACCGTTCACTACCCGAATTCGGTGGTAACCTGGGAGGAGGC
AAGAGCTGGACACTCCCCAACGGAAACCGTCTGAGCGTGCTTGCCTCGGTAGGTGTCAGCAACGAAAACCAAATCTTGAA
AGACGCCTACGTGACCACTATGACCGCTCAGGGCACACACCTCGACAAGTTCAATTATGACAGTTATTCCAGCGCACTGA
AAATAGCCGGATTGGGCAACATCGGCTACTCGTTCCGGCAGGCGGACCACATCAACTTCACCGTGTTCTATGCACGCAAT
GCCATCAACGATTATATGTCCCGCGAGGGGATCGATGCCGAAAAGAACAACATCACATCGAGCAACAGCGTTTTCCATGC
CTACTCACTACTGAACAACCAGTTGCTGGGACACCACGAACTGACTTCTCAGTGGGATGTAAACTGGAGCGCTTCGTACG
GACTGACCAACAGTGACGAACCGGATCGCCGGCAGGTGGTCTTCTTCCGTAACGAAGGCAGCGATAAGCTGAACCTCTTT
AAACTCAACCAGACTACCAACCGCTACTTCGGAGAACTGCAAGAGAAAGAGATTGTAGGAGATCTGCGCACCTCGTACAA
ATGGGGAGATGCGAACCTGATTCGTGTGGGAGGTACTTACAAAAGCAAAAAACGCGACTTTGAAAGCGTGAACTTCTACT
ACGATATCAATGCCTTGAACGCTGACGTCACCAACATTTATGATACCAACGGATATCTGAATCAGGAAAACATAGCCAAC
GGGACGATAAAAGCCAACATCGATGCACAGCCCCGTTACAACTACTACGCCGGAATGGATGTGTGGGCAGGGTTTGCAGA
AATAGAGTACTACCCGATGGAATCTCTGCTGGTCAACGTGGGACTGCGCTACGAGCAGGCCAAACAATGGGTACGCTATT
GGACGGACGGCGGACAGGAGAAGAAAACGAACCTGGACAAAGGCGACTTCTTCCCGGCACTGAACCTGAAGTACAGCCTG
AACGAAACCAACAGCCTGCGCCTCTCCGTATCACGCACTGTCACCCGCCCTTCATTTATCGAAATGGCTCCGTTCCTCTA
CCAGGAATCTTACGGAAGTGCCTATATCCGCGGTAACAACGAACTGAAAAACGCTTATAATTATAACATCGACCTGCGCT
ATGATTTCTTTCCGAAACGCAACAACGGGGATATGTTCTCTGTCACGGGTTATTTCAAAAAACTGAAATCGCCGATTGAA
CAGACTCAGGAGTCTTCGGGCGGCACAGTGATCCGCTCTTTCCGCAACGCCGAAGACGGAATAGCCACAGGAGTGGAAAT
AGAATTCCGCAAAGAACTGTTCAAGAACTTCCGTATCGGAGCCAATGGTTCATACATGTACACAAACGTCGTATTGCCCG
AAGGCGGGGTATATACCGACTCGGAACGCGCTCTGCAAGGAGCCTCTCCGTTCCTGATCAATGCAGATCTCAGCTACACT
CCTCAACTGAGAGGAGAAAGCGACCTGACACTGGCACTGGTTTACAATGTGCAAGGCCCGCGCATCGAGACAGTAGGTAT
CTACGGAACAGGTAACATCAAGCAACAGACCCTGCACACGATGGACTTCATAGCAAGCTATGCCATCAACAAACACCTGA
GCCTGCGCCTGCAGATGAAAGACTTGTTGAACAGTACCATCCGCTTCAAGCAGGAGCTGCCGGCAACGGGACAAAAGGTG
GAAGTAGAATCATTCCGTCCGGGAACCAGTGCAGAAATAGGAGTCTCGTACAGATTCTAA

Upstream 100 bases:

>100_bases
GAATGTAACACAGATGTTAACGAATCGTATAGGGCATGTATCACCCCCGTAACCTGAATCGTGCAACTTTGCACCGACAG
AAAAACGTAGATAAAAAGAC

Downstream 100 bases:

>100_bases
GGCTCGCCACAGGGTCACACAGAATATTTATATGAATAATCAAACAGATAGTATAAACCTAAAACAGTATGAATATGAAA
ACGAATTATCTAAAACTCAA

Product: putative TonB-dependent receptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>899_residues
MKQQIGRLLSTLLLATFSLGITAGVIQGTIIDKQTKEPLTGATVQIAGTTTGTVADVDGNYTLTLSNGTYTIEVKYIGYK
TLRMNEVKVKANATLNFELEVDAQTLDAVTVVARKNLEGEKALLQERQKATLAIENMGAKEMTLKGISNVQDGVKKITGI
SIASAGQLIVRGLGDRYSTTTLNGLPIASPNPDNKLIPLDLFPASTVKNITVSKVYAAGAFADYSGAHIDISTKENTGSD
FFSIGFNVGGRFNTVGKDFYYSDRKGGLFSTGNLRNKDRILAMGKSEFRDYARNNDPFGTNFAISKHRSLPEFGGNLGGG
KSWTLPNGNRLSVLASVGVSNENQILKDAYVTTMTAQGTHLDKFNYDSYSSALKIAGLGNIGYSFRQADHINFTVFYARN
AINDYMSREGIDAEKNNITSSNSVFHAYSLLNNQLLGHHELTSQWDVNWSASYGLTNSDEPDRRQVVFFRNEGSDKLNLF
KLNQTTNRYFGELQEKEIVGDLRTSYKWGDANLIRVGGTYKSKKRDFESVNFYYDINALNADVTNIYDTNGYLNQENIAN
GTIKANIDAQPRYNYYAGMDVWAGFAEIEYYPMESLLVNVGLRYEQAKQWVRYWTDGGQEKKTNLDKGDFFPALNLKYSL
NETNSLRLSVSRTVTRPSFIEMAPFLYQESYGSAYIRGNNELKNAYNYNIDLRYDFFPKRNNGDMFSVTGYFKKLKSPIE
QTQESSGGTVIRSFRNAEDGIATGVEIEFRKELFKNFRIGANGSYMYTNVVLPEGGVYTDSERALQGASPFLINADLSYT
PQLRGESDLTLALVYNVQGPRIETVGIYGTGNIKQQTLHTMDFIASYAINKHLSLRLQMKDLLNSTIRFKQELPATGQKV
EVESFRPGTSAEIGVSYRF

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA