Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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The map label for this gene is dnaE

Identifier: 60680202

GI number:

Start: 774624

End: 778418

Strand: Direct

Name: dnaE

Synonym: BF0641

Alternate gene names: NA

Gene position: NA

Preceding gene: 60680198

Following gene: 60680203

Centisome position: NA

GC content: NA

Gene sequence:

>3795_bases
ATGCAGGATTTCGTTCATTTACACGTCCATACGCAATATTCTCTTCTGGATGGTCAGGCCAGTGTCAGTGCATTGGTCGA
TAAGGCTATGAAAGACGGGATGAAAGGTATTGCCGTTACGGACCATGGAAACATGTTCGCCATTAAAGAGTTTACGAACT
ATGTTAATAAGAAAAATGGAGGTCCGAAAGGAGAAATAAAGGACCTGAAGAAGCGGATTGCAGCTATTGAAGCCGGTGAA
GTGGAGTGTGCGGATAAAGATGCCGAGATTGCTGACTGTAAAGCTAAAATAGCGGATGCGGAAGGGCGATTGTTCAAGCC
TATCATAGGCTGTGAGATGTATGTGGCTCGCCGTACAATGGATAAAAAGGAGGGAAAGCCTGACCAGAGCGGGTATCACC
TGATTGTGCTCGCCAAAAACGAGAAGGGGTATCATAACCTGATAAAATTGGTTTCGCGGGCATGGACCAAAGGTTACTAT
ATGCGTCCCCGTACAGACCGGAACGAGTTGGAGAAATATCACGAAGGTTTGATTATCTGTTCTGCGTGCTTGGGCGGTGA
AGTGCCCAAAAAGATAACTCAGGGATTGTTGGCGGAAGCAGAAGAAGCCATCCAATGGTATAAGAACCTGTTTGGAGACG
ATTATTATCTGGAAATGCAGCGCCATAAAGCGACAGTGCCTAAAGCAAATCATGAAGCTTATCCGTTGCAGGTGAATGTA
AATAAGCATTTGATTGAATACTCCAAAAAGTATAATGTCAAGTTAATCTGTACGAATGATGTTCACTTTGTCAACGAAGA
ACATGCTGAGGCGCACGATCGGCTGATCTGTTTGAGTACGGGAAAAGATCTCGACGATCCGAACCGGATGTATTATACGA
AACAAGAGTGGATGAAGACGAAGGCAGAGATGAATGAACTCTTTGCCGATGTGCCCGAAGCATTGAGTAATACACTTGAG
ATTCTGGATAAAGTAGAGTATTATTCAATCGATCACGCACCGATTATGCCTACTTTTGCAATCCCCGAGGACTTTGGTAC
AGAAGAAGGATATCGGCAAAAATATACGGAAAAGGATCTTTTTGATGAGTTCACCCAAGACGAAAACGGCAACGTGGTGT
TGAGTGAGGAAGCAGCCAAAGATAAAATAAAACGTTTGGGAGGCTATGATAAACTGTACCGTATCAAACTGGAAGCCGAC
TATCTGAAAAAGCTGACTTTCGACGGAGCTAAGAAGTTTTATGGTGATCCGTTGTCACCGGAGGTCAAAGAGCGGCTGGT
CTTTGAATTACATATTATGAAGACCATGGGTTTCCCGGGATACTTTCTTATAGTACAAGATTTTATTGCCGCCGGGCGTA
ATATGGGAGTCTCCATTGGTCCGGGACGTGGTTCCGCTGCCGGTTCTGCCGTAGCCTATTGTTTGCAGATCACTAAAATA
GACCCGATCAAATACGATTTGCTGTTTGAGCGTTTCTTGAATCCCGATCGTATTTCATTGCCTGATATCGATATTGACTT
CGATGATGATGGTCGTGGCGAAGTGTTACGTTGGGTGACGGAGAAATATGGACAGGAAAAGGTGGCGCATATCATTACCT
ATGGTACTATGGCTACGAAACTGGCTATCAAAGATGTTGCCCGTGTCCAGAAACTTCCGCTTGCCGAATCGGATCGCTTG
GCCAAATTGGTTCCGGATAAAATTCCGGATAAGAAACTGAATCTGAAGAATGCCATAGAATATGTGCCCGAATTGCAGGC
GGCTGAAGCATCGCCCGATCCTTTGGTGAGGGATACGATGAAATATGCCAAGATGCTTGAGGGGAATGTGCGTGGAACGG
GTGTACATGCCTGTGGCACTATTATTTGTCGTGATGATATCACGGATTGGGTACCGGTCAGCACGGCTGATGATAAAGAG
ACCGGCGAAAAGATGCTGGTTACCCAATATGAAGGTTCGGTGATCGAAGATACCGGATTGATCAAGATGGACTTTCTGGG
GCTGAAAACATTGTCTATTATAAAGGAGGCTGTCGAAAATATTCGTTTGAGTAAAGGAATGGAACTGGATATCGATTCCA
TTTCAATCGAGGATCCGGCTACTTATAAACTTTACAGTGACGGACGAACGATCGGTACTTTCCAGTTTGAGTCTGCCGGT
ATGCAGAAGTACCTGCGTGAGTTGCAACCTTCTACGTTTGAGGACCTGATTGCGATGAATGCCCTTTACCGTCCGGGTCC
GATGGATTATATTCCTGACTTTATTGATCGTAAACATGGACGTAAGCCTATTGAATATGATATTCCTGTCATGGAGAAAT
ACCTGAAGGATACATACGGTATTACGGTCTATCAGGAGCAGGTCATGCTTTTGTCACGTCTGCTGGCCGACTTTACGCGT
GGTGAATCGGATGCCCTCCGTAAAGCGATGGGTAAAAAATTGCGTGATAAGTTGGATCACATGAAACCCAAGTTTGTAGA
AGGCGGAAGGAAAAACGGACACGACCCGAAAGTTCTTGAAAAGATTTGGGCGGACTGGGAGAAATTTGCATCGTATGCGT
TCAATAAATCACATGCCACCTGTTATTCTTGGGTTGCCTATCAGACTGCTTATCTGAAAGCCAATTATCCGGCTGAATAT
ATGGCTGCTGTCATGAGCCGAAGTTTGTCGAATATCACTGATATTACCAAACTGATGGACGAGTGTAAAATGATGGGAGT
ACAGACGTTGGGACCGGATGTGAATGAAAGTAACCTGAAGTTTACCGTAAACCGGAATGGAAATATACGTTTCGGATTGG
GAGCCGTCAAAGGTGTGGGTGAGGCTGCCGTGCAAAGCATCATGGAGGAGCGAAAAGAGAACGGTCCCTTTAAAGGTATC
TTCGACTTTGTGCAGCGTGTCAACCTGAATGCTTGTAACAAGAAAAATATGGAATGCCTGGCACTTGCCGGTGGATTCGA
TAGCTTTCCTGAACTGAAGCGTGAACAGTATTTTGCTGTGAACAGCAAAGGAGAGACTTTTCTTGAGACATTGATGCGTT
ATGGCAACCGTTACCAAGCTGATAAGGCTGCCGCCGTTAATTCTTTGTTCGGCGGAGATAACGTTATCGATATAGCGACT
CCCGAAATTCTACCGGCGGAACGTTGGAACGATTTGGAGAGACTGAATAAGGAACGCGAACTGGTAGGTATTTATTTGTC
GGCACATCCGCTTGATGAATATGCCATTGTGTTGGAACATGTTTGCAATACACATATGAGCGAGCTTGATGATAAATCGG
CTTTGGCAGGAAGAGAGATTACGATGGGAGGCATTGTTACCAGTGTCCGCCGGGGTATCAGTAAGAATGGAAATCCTTAT
GGTATAGCTAAAATAGAAGATTATTCCGGTTCGGCAGAGATTCCTTTCTTTGGAAATGACTGGGTTACTTTCCAAGGCTA
TTTAGGTGAAGGTACTTTCTTGTTTATCAAAGCCCGTTGTCAACCTAAACAATGGCGTCCCGATGAACTTGATGTCAAGA
TTACTTCGATGGAATTGCTGCCCGATGTCAAGGAACAACTGATAGAGAAGATTACGATTCTGATTCCGCTTGCCGAACTT
AATTCGGCTTTGGTAACCGAGCTTGCTTCTTTAACGAAAGAACACCCGGGAAATACGGAACTTTATTTCAAAGTAACGGA
TACGGAGGGGAAGATGTATGTAGACCTGATTTCCCGTCCTGTGAAACTTTCGGTTGGCAGAGAATTAATTTCCTATTTAA
AGGAACGTCCCGAACTTGCGTTTCATATAAATTGA

Upstream 100 bases:

>100_bases
GCAGGTAGAAATGACTTATGTTGATAACTTTTTGAAGTTTATCTTTGTTAGTAGCTGTAGACATTGTAATTTTATGGCTT
CAAATTATCAACCTATAACT

Downstream 100 bases:

>100_bases
TTATCTTTGCCGCATAACAGTGATAGATACTTAATAACTAACAATTAATAATTATAGAAAATGGCTTTAGAGATTACTGA
CAACAACTTTAAGGAAATCC

Product: putative DNA polymerase III alpha subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1264_residues
MQDFVHLHVHTQYSLLDGQASVSALVDKAMKDGMKGIAVTDHGNMFAIKEFTNYVNKKNGGPKGEIKDLKKRIAAIEAGE
VECADKDAEIADCKAKIADAEGRLFKPIIGCEMYVARRTMDKKEGKPDQSGYHLIVLAKNEKGYHNLIKLVSRAWTKGYY
MRPRTDRNELEKYHEGLIICSACLGGEVPKKITQGLLAEAEEAIQWYKNLFGDDYYLEMQRHKATVPKANHEAYPLQVNV
NKHLIEYSKKYNVKLICTNDVHFVNEEHAEAHDRLICLSTGKDLDDPNRMYYTKQEWMKTKAEMNELFADVPEALSNTLE
ILDKVEYYSIDHAPIMPTFAIPEDFGTEEGYRQKYTEKDLFDEFTQDENGNVVLSEEAAKDKIKRLGGYDKLYRIKLEAD
YLKKLTFDGAKKFYGDPLSPEVKERLVFELHIMKTMGFPGYFLIVQDFIAAGRNMGVSIGPGRGSAAGSAVAYCLQITKI
DPIKYDLLFERFLNPDRISLPDIDIDFDDDGRGEVLRWVTEKYGQEKVAHIITYGTMATKLAIKDVARVQKLPLAESDRL
AKLVPDKIPDKKLNLKNAIEYVPELQAAEASPDPLVRDTMKYAKMLEGNVRGTGVHACGTIICRDDITDWVPVSTADDKE
TGEKMLVTQYEGSVIEDTGLIKMDFLGLKTLSIIKEAVENIRLSKGMELDIDSISIEDPATYKLYSDGRTIGTFQFESAG
MQKYLRELQPSTFEDLIAMNALYRPGPMDYIPDFIDRKHGRKPIEYDIPVMEKYLKDTYGITVYQEQVMLLSRLLADFTR
GESDALRKAMGKKLRDKLDHMKPKFVEGGRKNGHDPKVLEKIWADWEKFASYAFNKSHATCYSWVAYQTAYLKANYPAEY
MAAVMSRSLSNITDITKLMDECKMMGVQTLGPDVNESNLKFTVNRNGNIRFGLGAVKGVGEAAVQSIMEERKENGPFKGI
FDFVQRVNLNACNKKNMECLALAGGFDSFPELKREQYFAVNSKGETFLETLMRYGNRYQADKAAAVNSLFGGDNVIDIAT
PEILPAERWNDLERLNKERELVGIYLSAHPLDEYAIVLEHVCNTHMSELDDKSALAGREITMGGIVTSVRRGISKNGNPY
GIAKIEDYSGSAEIPFFGNDWVTFQGYLGEGTFLFIKARCQPKQWRPDELDVKITSMELLPDVKEQLIEKITILIPLAEL
NSALVTELASLTKEHPGNTELYFKVTDTEGKMYVDLISRPVKLSVGRELISYLKERPELAFHIN

Sequences:
NA

Specific function: NA

COG id: COG0587

COG function: function code L; DNA polymerase III, alpha subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA