| Definition | Listeria innocua Clip11262, complete genome. |
|---|---|
| Accession | NC_003212 |
| Length | 3,011,208 |
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Identifier: 16799596
GI number:
Start: 542615
End: 545602
Strand: Direct
Name: Not Available
Synonym: lin0521
Alternate gene names: NA
Gene position: NA
Preceding gene: 16799595
Following gene: 16799597
Centisome position: NA
GC content: NA
Gene sequence:
>2988_bases GTGGCAGAAGCAAAATTTGAAGCAGCTTTAATTAAAAAGCTTGAAACTGAAGGGTGGACTTATCGGGAAGATTTATCCAA TGTTAGTATTAAAAAACTTGAAGAGCATTGGCGTGATATCTTAAATGAAACTAACGCACATAAACTCAATGGAGTACCAT TGTCAGAAATTGAGTTTGGATTAATCCTTCAAGAATTACAACGTATTAGAACACCGTATGATGCTCAATTATTATTAGTG GGTGCAGGTGGAGTAGGTTCAATTCCTATTACTCGTGATGATGGTTCAAGCTTGGAAGTTGAAATTTTTTATGAAGATGA TGTAGCGGGGGGGCGCTCTCGGTATGAAATTGTCAATCAAGTAAGATTTGATAATCTATCTGAAGGATTAACAACAAAAC GTATAATTGATGTAGCTTTACTTATTAATGGAATTCCGGTAGTACATATTGAAGAAAAAGATGAGCATTTGCAAAATCAG TGGCGAGCTTTTGAACAACTCAAAGGTTATCATGGTGACGGACTGTATAAAGGATTGTTTGCTTTTGTACAAGTTCAAGT TATCATGAGTCAACATTCGGCACATTATTTTGCTCGTCCAAATGCATTTGAACAATATAATAAAACTTTTGTGTTTGGCT GGCGGGACGAAAATAATAAAGATATTACGGATGCATTTGAATTTATTCATCAAGTAATGAGTATCCCTGCTCTCCACCGC TTAGTTACAGTTAATATGATCCCGGATGCGTCAAATGATAACATAATGGTAATGCGCAGCTACCAAATTCAAGCAACAAG GGAAATTTTACAACGCATGAAAGAAATGGAAGCAAGCGGACTTGTGCAAAAAGAGGGCGGGTATATATGGCATACAACTG GATCAGGCAAGACAGTTACTTCCTTTAAAGTTGCACAACTCTTAGCATCTGCGCCTAGAATTAAAAATGTACTATTTATT GTGGATCGTATTGACTTAATAGATCAAACACTCGAAAATTTTAAAAGTTTCGCATATGCTCACTTTAAAAATCGCATTAA GAAGGTTAATGGAAGAGAGTTAAAGAGAGAATTAAAGAGAAAAGGCTCCTCGCAAATTTTATTGATTTCAGTTCAAGGAT TGACAAAAGCTGTTAAAAAAGGTTTAGAAAATGACGACTGGAATGTCATTATTATGGATGAGGCGCACCGAAGCGCGAGT GGAGAATCTGTAAAGTTAATCAAAAAGGCCCTCAAGAAGACAACTTGGTTTGGGTTCACGGGTACTCCGAACTTTTACAG TGATGAAATAAATGATGTCAAAACAACTCGAGAAATTTCAACGCATGATATATTTGGCAAACGACTACATACATATACCA TTAAAGATGCTATTGGCGACGGAAATGTCTTAGGATTTGATGTAACTTATTTCAAACCTCATTGGGTGGTTGAACATCCA CAAGAAGACTTTTCTGAAAAAGACTATGAAAAAGAAGTTTATCAAAGTGATGTCTATCGTCAAGAAGTCGTAAAAGATAT CCTTGATAACTGGACGAAAACATCTAGTGGGGCTTTAATTGCAGGTAAACGTGAAGAGAATGCCTTCCAAGCGATGTTTG CAGTGTCAGGTAAGCAAGCAGCTGTGAATTATTATAATATTTTCAAATCGAAAGGATCTCATTTAAATGTAGCAATGACA TTTTCACGTGATGAGTCTAATGAACATGGTACAAAGGAACAAAATGAGGCGCTTAAAATTGCGATTAAAGACTATACTGA AAAATTCAATGTTCCAAGCATTTTAGACGCAAAGGATCCGGCTCGAGCTTACATGTTAGATATAACTAAGCGATTAGCAC GTAAAAGACCATATAATCAAGGTAAAGAAAAAGATAGATTAGATTTAGTAATTGTTTCAGATCAGCTTTTAACGGGCTTT GATTCAAAGTTCATCAACGTAATCTACATGGACAAAATGCTCAAAGAAGGAATGCTAATACAGGCGATTTCTAGAACGAA TCGAACTTTTGACCTTAACAGCAAACCACATGGGAAAGTACGTTTTTATCGCCAAGGTGATGAAATGCGCGAATTTGTTG AAAATGCGCTACGTATTTATACGAGAGGTGGCAATGATACTCTTCAAGAAGCGGAAGAGGAGACAAAAAATCAGCTACCT AAAGATTTAGAAAATGACGATATTCTTGCAAAGCCCCAGAGTCATCAAATCAACGAACTAGAAGAAGCTGTCTTAAGATT GAAAGAGCTTGCTGGCGATGATTTTAGTCAAGTTCCACGAGGCCAAAATGATCTAAAAGAATTTGTTGGTCTTGCTTTAA CTACTCAAACCAGGATCCAGCAATTAATACAGCAGGGTTACGAGCTAGGAAGCGAGATTGAGGAGCTAAATGAACAAGGT GAAGCGACTGGAAGAATGGTTCGTTTGAACATTTCAAGTATTGATGAATTTGGTGCTTTACAAGCTCGTTTATATGATGC TAAGGAGAAATTACCTCCTGAGGAACGTCCAGATCTCACTGAAATAAAGATTGGAATTGAATTTTATCATCACGAGATAA TTGACTACGATATGCTAGTTGAGCTTCTGAATACCTTTATGGATGAAAAAAATAAAAGTAATAAAGATGCTATCGAAAAA CACATCGTACCAATGGATGAAGAAAGTCAACATGAAATCCATGGGATCGTGGATGATATTGAAGCAGGTAATATTACAGA ACATTTTACAACCGATTCTCTTCAGGAAACACGTAAGAAATACCGTACTGAACATCGAGAGCTTAAAGTTCGCCGTTGGG CAGCTAACCAAAAAGTCAATGGTAATCGTATTGTGGAAGCTTTCGACTTATTCTTACCAGGGCATACGCTCATTGATAAT CCAAAGCTAGCGGATATTGTGCGTGAGATTGAAGAAGAGGAAAACATCGGATTTTTTGAAGCCTCAGATTTTGAAGAAGA GCTAATGGCATTCTTCAATTCACTATAA
Upstream 100 bases:
>100_bases AAAAACAGCATAAGCTAAATTTTTTATGGGAACTATGAAGTATGATATAGAGAGAATTACAGTAATAGTTCATAACAAAA TTGCGAAAGGACGTATTTAT
Downstream 100 bases:
>100_bases GCAAATATGAGTTTTATTTATAATAATAGAAAGAAGGAAAGAACATAATGGCATTATCAACTGAACAAAAAACAAAAATG TGGGCAATGCTCAACCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>995_residues MAEAKFEAALIKKLETEGWTYREDLSNVSIKKLEEHWRDILNETNAHKLNGVPLSEIEFGLILQELQRIRTPYDAQLLLV GAGGVGSIPITRDDGSSLEVEIFYEDDVAGGRSRYEIVNQVRFDNLSEGLTTKRIIDVALLINGIPVVHIEEKDEHLQNQ WRAFEQLKGYHGDGLYKGLFAFVQVQVIMSQHSAHYFARPNAFEQYNKTFVFGWRDENNKDITDAFEFIHQVMSIPALHR LVTVNMIPDASNDNIMVMRSYQIQATREILQRMKEMEASGLVQKEGGYIWHTTGSGKTVTSFKVAQLLASAPRIKNVLFI VDRIDLIDQTLENFKSFAYAHFKNRIKKVNGRELKRELKRKGSSQILLISVQGLTKAVKKGLENDDWNVIIMDEAHRSAS GESVKLIKKALKKTTWFGFTGTPNFYSDEINDVKTTREISTHDIFGKRLHTYTIKDAIGDGNVLGFDVTYFKPHWVVEHP QEDFSEKDYEKEVYQSDVYRQEVVKDILDNWTKTSSGALIAGKREENAFQAMFAVSGKQAAVNYYNIFKSKGSHLNVAMT FSRDESNEHGTKEQNEALKIAIKDYTEKFNVPSILDAKDPARAYMLDITKRLARKRPYNQGKEKDRLDLVIVSDQLLTGF DSKFINVIYMDKMLKEGMLIQAISRTNRTFDLNSKPHGKVRFYRQGDEMREFVENALRIYTRGGNDTLQEAEEETKNQLP KDLENDDILAKPQSHQINELEEAVLRLKELAGDDFSQVPRGQNDLKEFVGLALTTQTRIQQLIQQGYELGSEIEELNEQG EATGRMVRLNISSIDEFGALQARLYDAKEKLPPEERPDLTEIKIGIEFYHHEIIDYDMLVELLNTFMDEKNKSNKDAIEK HIVPMDEESQHEIHGIVDDIEAGNITEHFTTDSLQETRKKYRTEHRELKVRRWAANQKVNGNRIVEAFDLFLPGHTLIDN PKLADIVREIEEEENIGFFEASDFEEELMAFFNSL
Sequences:
NA
Specific function: NA
COG id: COG0610
COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA