| Definition | Listeria innocua Clip11262, complete genome. |
|---|---|
| Accession | NC_003212 |
| Length | 3,011,208 |
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Identifier: 16799533
GI number:
Start: 472040
End: 478081
Strand: Direct
Name: Not Available
Synonym: lin0457
Alternate gene names: NA
Gene position: NA
Preceding gene: 16799532
Following gene: 16799535
Centisome position: NA
GC content: NA
Gene sequence:
>6042_bases TTGATCAGAAAAATCTTTATCGGGATTTTGTCATTTACTATCTTAATCCAAACTGTGATTGTTTCAAACTTTAATGTTGT TTATGCAACTACTGAAGAGCAACAACAAAAAGTTATTAAGTTAGAAAAAAAATCAACTAATAATAATATAATTTTAATAA AAGATGCTGTTAAAGATAAAGAATATAAATTATCTTTACCAAAATCTTTTAGTTTAGATGAGAAAAAGACAGGCAAAGAA GTTGAATATAACAAAGAAAAAAATGAACTAACAATTATAGGAACAGGGGAAGAAATAACGCTATATTTACTTGCTTCTCA AACAGGAAAATACGAACTTGAACTAAAAGAAGGGGACAAAGTACAAGCCAAGTTAGATTTAATTGTAAAAAATGTAGATG AAGAAGTCGCAAAAACAGTCGAAAAATCAAATAGACAGTTACTGCGTTCATCCATTTCGGATAAACTATTTCTTCAAGCT GATTCAAGTAAAGCCACATTAGCTAATTATACAGAACAAATAACTTTTAACTATTCTATTAATTTTCTAGATGGTTCTAC GACATTGAAAAACGGTAAATTAGTAATAGATTTTAATAACTCTAATCTTGAACTAGTGAATTATCCTAAAGATACAGCAG CAAATAGGAATATAAAATCAACATCTTATAGTGCGATTACAGGTAAATTAACCATTAACTTAGTGGATAATATATCTAGT GGTGCTCCATTTGATATTCCAATCGTTGTAAGAGCTGGTTATGGTGCAAAGCCAGGAGTACCAATGAATCTAAAAGCTAC ACTGTCAGGAGAGAACAGTGCTGGTGCCACATATACACCAGCAGAAAAAACAACCACCGTTAATTTAGAAGAAAATAGCA GCAATCTAGACTATAGCCCAATTACAGCAGGTGATAATAGCTGGGCTTTTAGTATGAAAGAACTCGCATTTTCACTTAAG CCAGGTGGATATACCATCCAATGGCCTGAAATCCAGAAGAAAAGTTCGGAAAATAAAAGTTTCAAAAATTTAAAATTAGA ATTTCTTAAAGAAAATGGTGGGGATATTATATCTGTTAATACGGCAGATCCTTACGTAATTAGATTCGGAGAGCCTTATT GGTCACAGCTTAGCACAGTTAATGGTAAAGCAAATGTACTTGTTAATGATGATGAGAAACAAGTAGTCGAATATGGACCC ATTAACGCTAATATTTACCAAAGAATACAGGTATCAATGGCAGCGAAAATACCAGCAGATGCGGTTAAAGGAACAGAGTA TACTGGTACGGTAAATGTATATGATGAAGATATTTTGGTAACTTCCATTAAAATTAAGACCGAAGTGACTGACTCAGCGA CTTCAATAGCTGTTGATAGCAAAGTTTCTAAAACAAGCATATCAGAAGGCGATGTACTGGAATGGGGATTCATGCCTAGA ATATCTTCTGCGGCACCAGGTGTTAATGATTTAGAAATTGTAGCACCAATTCCTAAAGGTATTAAAGTACTATCTTACAT CCCGAACAATAACTCAATGGCAAGTATGAAAAAATTAGAGTACTATCAGAATGGTAAATGGGTATCAATGGCTCCACAAA CTTCTAGTGGTTGGGATTTTTCAAAGATTGACCAGTCTGTTAATCGTATTGAAAAGCTAAAACTTACTTCTAGAGACGGA ATTATTAATGATAAAGATATGCCGCCGTATACTCATGGAACAATACGAATGCAAAATACTGGTGTGAAAGCAGGAGAATC CTTTACACTCCAACCAGAATCTATCACTTATACAGACTCTGATAAAACCAGTAAAGCAATTGATACAACTGCAAGTAGCT ATGAAAAGAAAGTTCAAGTAGTAGAAAAAACTTCTACTCCAGCGAAAATAAATGGCGATGTTTTCTTATCTTCAACTGCT GGTATTTATGGCAAAGGATTTGAAAGTACAATTTTTTTTAATGGCGACAAAATTGCACAGTCAGTTCGTTTAGGCTCATA CGGAAGTAAACTAGAAAATCCATATATTTTTGTGGTAGTACCAAAGGGTATCGATGTAGAAACTATGAAAAATTTCATTC AACAACCGTATAGAAGTATATTAAATTATACGTATGCTCCTGCTAATGGAACGAATACTCTTTACCCTAAATCCAGTGCA GATGTTAAGGGAAAAGAAACTTTATCAGATGGTTCCACATTATATTACTGGGAAGCGCCGGATACTGGTTTAGCACCAGG CATGGAAAATTGCGAAATGCTAGCCTTAGATTTAGTTTTTAAATTAAATAAAGCAAACAGTGGCGCAAATAAAGTAGAAT TTGGTATGGGATCAATGACAGATTCTAGTTGGAATTTATATGGTGCTGCTAATTCAGGATATGAAACAAAAGAATTATCT GCCGAATTACAATCCAAACTTCCCGGAGTAACATCTACTAAATACTTGTCTAAATCGAAGACGGCAAATGTAGGTGCATC TAATAGTATTGCAACTAAAATGAAAATTAAAGGAAGTCAAGATAACGACTTTGTTGATGTTAGTGCAAATACAGCTACTA CAATTCCAGGTAAAAGAGTAGATTATAATTTAACATTTGAAAATAATGGTACAAGAAGTATGAAGAACTTAGAAATTATC GATATACTTCCGCACAAGGATGATCAGTATGTTTTAGGCACTGGTCCACGCGGATCGAAATTTTCAGTTATCCCAACTAG TGAAATCGAAGTTCTTGTTAATGGGAAGAAAAGTGATTCAGCAACTTTAGAATATTCAACAAGTAATACACCTGAACGTT TCGATGCAAACGGGGAGGATGTAGCAGGTGACCCTTGGCAAATCGTGGCACCAACAAGTATGGCAGATGTAAAAAGTTTC CGTATTAAGCTACCAAATACAGAATTCAAAGTAGGAGACGAAATCAGCCTAAACTTTGAAGCAATAGTGCCAACAGATGC TCCAAGAAATGGTGAAATAGCATATAACTCGATTGCTTACCGGATTGATAAGGAAACAAGCTCTGGTACAAGCAAATTAG CATCAGAACCTCCTCGTGGGGGAGTAAAAAGTACAAATCCATCAACAGATTTAAACATAGCCGGTAACTCTTTCTCCGAT CTTAACAAAAATGGTGTAAAAGATGCGGACGAACTAGGTTTAAACGCTGTTAAATTAGATTTATACAAAAAAAATAACAA TGAATTTGAGAAAGTGGAAACCGTTTATACTTCCTCGGATGCTCTAGATAAAGAAAAAGGTTTATTTGATTTTAATGGCT TGAGTAATGGAACATATAAAATAGCTGCTCATCTACCGAATAAAAATGCAGACTTTATTACTACCGGTCCAAATAAAATC GTAAAAGACTCAAAAGATGATTCGATTGGCTGGATAACAGTCAATAACTCTACAGAATTCACAATTGATGATTTGGCTAA CGGAAATCCTAAAAGTCTAGTTGGTATTCATGTACCTATTTATATGGCAACACCTATAAAAGGCACTGTTGTTTTCGTAA ATAAAGACGGAGAACCAAAAATCACATCTTACGGTCAAGATTATGAAATAGCTTTATTTGATAAAGATGGAAAAGAAGTA CAATCAGCAATTAAAACGAATAATAAGGGAGAATTTTCTTTTAGTGATGTAGCTATTAAAAACCCAGCTGATTTTAAATT AAAAGTAACTGCACCAACTAGAACAAATTTTGTCTACTCAGCAAAAAATCCTTTATTTAATATGTCTACAAAGGAATATA CTTTAAATAGTGTAGTTCCAGGCGTGGGTGGGGTAGCAGAAATTTATATTACTGAAACTAGTAAACCAACTACAAAGATT ATACTAGATAAAGCAGTTACTCCAAATGCAATTACAATTGAATCAAGTGATGAAGCTACAGAAGTAACAAATGAATGGAC AGTAGTAGATAGTAATGGAACAGTCGTTTATTCTGGAACCGGAAATACGATTCGTATTCCAAACGATGAAGGAACGTATA TAGCTAAAAACACAGCAACAGATGAGGCTGGAAATACCGCTTCTGATGAAAAAACGTTTGATATAGATTATACAGTTCCG ACATTAACAGTTAATCAAGATGCATCAGCAGAAGTGAATAGTACTGAGGCAAATATTGATTGGATTAAGCCGTTAAATGT AGCAGCAACAGATACGCATGATGGAAATATCACGCCAGTAGTAGATTATAGTAAAGTTAAATGGGATGTACTTGGAACAT ACCCAGTTACTGTTACAGCAACAGATGCAAGTGGCAACAAAGCTACTCAAACAGTAAATTTACGCATAGTAGATACTACT TCGCCTACAATTTTAATAACGAATAATCCATTAACGTATTCTATCGAAAACATGCGAAAATTAACTGAACAAGAATTGTA TAAAGCGGCAGGACTTATCGGTGGAGATAATTATGATTTAGCACCAGGTCAATCAGTCCAACCAAATAAACAGCCAATGG TATTTACTAGCAACTTTAGTACTATTTTTAGTGACATCGCTAGTGTGAAACCTGGACAATATCAAGTTCAAGTGAATTTA GCAGATTCTAGTGGAAATCAAGCTATTCCACAAACAATTACTATTAATGTAGTAGATACCATGGGACCAGTGATTAAAGC AGATAATGTGTCTTACCACGTTAATACAACAAAAACAGAAGCAGAATTCTTCCAAGATGCTCGTTTAGATGTGACAGATA ACAATGATGATACAACTAATTTAATTATTACTTCTAATTTTGCAGAAAAAGTGAATTTGAATAAGCCTGGTAAGTATGAA GTAACCATCAGTGCTACAGATACTAAAGGCAATCAAACAACAAAAGAAATAACAGTTCAAGTAAGCAAGGATAAACCAGT CATTACTGCAGGTCCAAAAATAAGCTACCAAGGAAAAACCGAAGTAACAGAAGCTACCTTTTTAAGCGATATCCACGGGG AAGTAACGGATGAATTAGATGGTGATGTTAAAATTACTAGTGATTTTGCTAAAAAAGTAGATTTTAATAAAGTAGGAACA TATACGGTTACTTTAAATGCGAAAGATGAATATGGTAATACTGCAGAACCTGTAAAAGTGTCAGTACGCATCTTTAATAA GATCGCACCAACTTTCAATAATGCTGATAATAAAACAATTGAAGCAGTAAACGAGTTACCATCATTAGAATCTATATTTA ACATTGAAGCAAAAGACTATCTTTCAGGTAATAAATTAAAAGTAACTTATACACCAGATCAAACAATTAAAGGCAATGTT TTAGGTGAGTATTCTATTAAAGTCACAACGAAAGATGATTCAGGCAACACAGCTGAAACAACTGTTACTTTAACAATTAA AGATACAACAGGACCAAGCATAAAAATGACTAAATCAACAAACAAATTAGAAGTACAAAGCAAAGAACCGAATTGGATAA CTTTCTTTGGAGTAAAAGCGACTGATATTGTTGATGGTGATGTAACAAAAAATATTAAAGTAGACAGTAGTGAAGTCAAT CTTAATAAAGTAGGAACTTATCCTATCTACTTTACAGTTACAGATGCACTTGGAAATGAAGCTAGTAAATCAAAAAGCAC AGTGCAGATTGTAGATACAAGTAGTCCTGCGCTAACAATCGACAAACTAGAAATTAGTTATCCAACAGGAAAAACAGTTT CTGATAAGCAATTTCTACAAGATATTGGTACTAAAGTTACAAATAGTTATGGAACAGTAAAAGTAACTACTAATCTAAGT AAAATTGTTGATTGGGACAAAGCTGGACAGTATAAAGTAACTGTAACAGCGACAAATTCATCTGGAGGCGTTGCTGAGAA AACGATTCTATTAACGGTCAAAAAAGCTGATTCAGCGTTTATAGCAATACCAAGTAAGAATGATAATAATAACAAACCAA CAAAAAATATCCCAAAAACAGGAGATACTTTAAATACAGAGCTAATTGTCTTTGGTGTTATGTCGCTACTTGTTGGAGGA TGGTTGTTCTTAAGAAGAAAAACAAAAGTAAAAACAAAGTGA
Upstream 100 bases:
>100_bases TTTACGAATTTTGGATGAAACCGCATATATTTAATGACTAATTGGTTATTTATAATGAATAGTAGTCGACTTACAATATT TAGAACGGAGGAGAAATGAA
Downstream 100 bases:
>100_bases TTCATAATATTTGAAGAATGTTGTAAGACTCAAAAGTTAGACCTAAAACCGCCCAGAGGAATCTGGTCGGTTTTTTATTC GGCTTGCATTCTATATAACC
Product: peptidoglycan binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>2013_residues MIRKIFIGILSFTILIQTVIVSNFNVVYATTEEQQQKVIKLEKKSTNNNIILIKDAVKDKEYKLSLPKSFSLDEKKTGKE VEYNKEKNELTIIGTGEEITLYLLASQTGKYELELKEGDKVQAKLDLIVKNVDEEVAKTVEKSNRQLLRSSISDKLFLQA DSSKATLANYTEQITFNYSINFLDGSTTLKNGKLVIDFNNSNLELVNYPKDTAANRNIKSTSYSAITGKLTINLVDNISS GAPFDIPIVVRAGYGAKPGVPMNLKATLSGENSAGATYTPAEKTTTVNLEENSSNLDYSPITAGDNSWAFSMKELAFSLK PGGYTIQWPEIQKKSSENKSFKNLKLEFLKENGGDIISVNTADPYVIRFGEPYWSQLSTVNGKANVLVNDDEKQVVEYGP INANIYQRIQVSMAAKIPADAVKGTEYTGTVNVYDEDILVTSIKIKTEVTDSATSIAVDSKVSKTSISEGDVLEWGFMPR ISSAAPGVNDLEIVAPIPKGIKVLSYIPNNNSMASMKKLEYYQNGKWVSMAPQTSSGWDFSKIDQSVNRIEKLKLTSRDG IINDKDMPPYTHGTIRMQNTGVKAGESFTLQPESITYTDSDKTSKAIDTTASSYEKKVQVVEKTSTPAKINGDVFLSSTA GIYGKGFESTIFFNGDKIAQSVRLGSYGSKLENPYIFVVVPKGIDVETMKNFIQQPYRSILNYTYAPANGTNTLYPKSSA DVKGKETLSDGSTLYYWEAPDTGLAPGMENCEMLALDLVFKLNKANSGANKVEFGMGSMTDSSWNLYGAANSGYETKELS AELQSKLPGVTSTKYLSKSKTANVGASNSIATKMKIKGSQDNDFVDVSANTATTIPGKRVDYNLTFENNGTRSMKNLEII DILPHKDDQYVLGTGPRGSKFSVIPTSEIEVLVNGKKSDSATLEYSTSNTPERFDANGEDVAGDPWQIVAPTSMADVKSF RIKLPNTEFKVGDEISLNFEAIVPTDAPRNGEIAYNSIAYRIDKETSSGTSKLASEPPRGGVKSTNPSTDLNIAGNSFSD LNKNGVKDADELGLNAVKLDLYKKNNNEFEKVETVYTSSDALDKEKGLFDFNGLSNGTYKIAAHLPNKNADFITTGPNKI VKDSKDDSIGWITVNNSTEFTIDDLANGNPKSLVGIHVPIYMATPIKGTVVFVNKDGEPKITSYGQDYEIALFDKDGKEV QSAIKTNNKGEFSFSDVAIKNPADFKLKVTAPTRTNFVYSAKNPLFNMSTKEYTLNSVVPGVGGVAEIYITETSKPTTKI ILDKAVTPNAITIESSDEATEVTNEWTVVDSNGTVVYSGTGNTIRIPNDEGTYIAKNTATDEAGNTASDEKTFDIDYTVP TLTVNQDASAEVNSTEANIDWIKPLNVAATDTHDGNITPVVDYSKVKWDVLGTYPVTVTATDASGNKATQTVNLRIVDTT SPTILITNNPLTYSIENMRKLTEQELYKAAGLIGGDNYDLAPGQSVQPNKQPMVFTSNFSTIFSDIASVKPGQYQVQVNL ADSSGNQAIPQTITINVVDTMGPVIKADNVSYHVNTTKTEAEFFQDARLDVTDNNDDTTNLIITSNFAEKVNLNKPGKYE VTISATDTKGNQTTKEITVQVSKDKPVITAGPKISYQGKTEVTEATFLSDIHGEVTDELDGDVKITSDFAKKVDFNKVGT YTVTLNAKDEYGNTAEPVKVSVRIFNKIAPTFNNADNKTIEAVNELPSLESIFNIEAKDYLSGNKLKVTYTPDQTIKGNV LGEYSIKVTTKDDSGNTAETTVTLTIKDTTGPSIKMTKSTNKLEVQSKEPNWITFFGVKATDIVDGDVTKNIKVDSSEVN LNKVGTYPIYFTVTDALGNEASKSKSTVQIVDTSSPALTIDKLEISYPTGKTVSDKQFLQDIGTKVTNSYGTVKVTTNLS KIVDWDKAGQYKVTVTATNSSGGVAEKTILLTVKKADSAFIAIPSKNDNNNKPTKNIPKTGDTLNTELIVFGVMSLLVGG WLFLRRKTKVKTK
Sequences:
NA
Specific function: NA
COG id: NA
COG function: NA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA