| Definition | Listeria innocua Clip11262, complete genome. |
|---|---|
| Accession | NC_003212 |
| Length | 3,011,208 |
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Identifier: 16799218
GI number:
Start: 131478
End: 137459
Strand: Direct
Name: Not Available
Synonym: lin0141
Alternate gene names: NA
Gene position: NA
Preceding gene: 16799217
Following gene: 16799219
Centisome position: NA
GC content: NA
Gene sequence:
>5982_bases ATGATGAAACTTAAAAGCTTGAGGCGTCCATTATTATTAGTCATGGCAGCTTTACTGATTATCGGTCAATTGAATCTTTC GTCCTTCCGAGTATTCGCGGAAGAAAAAGGTAACGAATCAGTTTCTTATGAGATACAAAATGAACTTTCAAGCGACAAGA AAAAAGCTAAATTGAAGATTAAAACAACCCCTAAAAACGAGGAAGTTAAAATCTTAACGATACAAACACCAGATGGTAAA AAAGTAGAAGGTCAAGAAGCAGAATATACAGCCACGAAAAATGGTACTGTGGATTTTGTAATTAACTATCAAGACCAAGA TAAAACAGAAAAAACTTATACTGCTTCTTATGAAGTAAATGATATTTCTGAAGAAGTACAAAATACACCGAAACCGACTG TCACGGAAGGAAATACTCCTAAAAAAGGATCTAACTTGCTTAAATCAAGCGCTCCTACTGTGTCAATGAAAATTCCTGAT TATAACAAAACAAATTGGGAGAATGGAGACATTAAAGACGTTTCTGTAACAGTTGAGTTTAACAACAACAATGCTTCTGG TAAAAAGATTAATTTCACTTTGCCAGACGGAATGCGTTTTGTTTCTCTACCAGTTCCAAGTAGTTATCAAGCACCTAGTA GCGTAGACTCGAATATTTTAAGTTATTTTGGCGCAGGTAATCCAGTTGGAGATTCGATTACTTCAGTGACTGTTCCAAAT AAAGAAACAGGCTACAATAAAGCAACTTATGGTACTTTGAGCTATGAACTAGATCCAGCTACTGAAAAACTAACTCTAAA CTTCTCTGTACAAGTAGATGCAGCTAAATACTATGGTCCTACTGACTTGAAGTCTCCAATTAAAGTTGATGCTTATATGG GAGAAGGAAGTACTCCAGCAGCATCCGCAGAGCAAAGCATTCGTGCCGAGGGTAAAACTGTTGTTGGCTATGCAAATCAA AAACAGGTAGACACAATGTTTAGAAACTGGTATACATCTTCATTTTTACCAGAAGTAAGTCCAAGTACAGCCACTGAAGA TTCTTATAACTACACTAAACCTTATTCAGTTGTAAATGGTATCAGCCAAATGGATGGACGTGGTTCAAAAATCTTTGTTC CTAAAAACGTTAAAACTACTCTTTATTACCCAGAAGGTATGGAGTATGTAGGCGTAGTTAATGAAAACAAGAGTTTACTA ACAAACAACGAAAATAGAACAATCACGCATTATCCAAACGAAAATAAAGTAGAAATTGACTTTAAACAAGAAAATTACTA CGGTATTATTGAAACTATTTTAGCAGTAAAATACAAGGTACCAGAAGGAACAGAAGAAGGGACTTATACTTCTCCTAAAG TACCACATGCAGTTATTACGACATATGATGATAAAGTGTTTGAAACAGATGCATTAACTAATGATGCAAGTGATACAACA ACACTAGCTGCAAAAGACACATGTAAAGTAGTAGGTAAAGCAGCAAATAAAATGGTTATGCTACCAAGAAACTACTATAT AAATCCAGATAACGAATCTTGGGCGGGACTTATTCAAATCAATAATAGGCAAACTGCCGGAGTGAAAACAAACCAAATTT ACCAAATTAAATTTGATGAAAACTGGGAAGCCTATACTGTCAACATACCTTTTGATGGAACTTACCCAGGTAATAAAGTA AAAGACGTACAGTATAAAACGAACTTAAATTCGGAATATCGAACTTACGATGGTACTCTTCCGAAAACAAATGGTAATAA AATGCTTACTTTAGATGCAACAGCAGTTGGACTTCAAGAAGGCGAGTACTTTACTGAAGTAAAAGCTAACGTTGGAGACT TCTCTGTAGGTTTCACTAATATTGACACAGCTGCCCCATTTAAAGCAGCAAATTCTGCTTCATACGGGATTGTTAAACCA GGTATTACATCTGTTCAATTTGACGTGAATATTTGGAACGCAGATGATGAAGAAAATACAAAAGTTTCAGGATCATCCAC ATATACAGTTGCTAATAATATAAGTACGGCAGCAAATGGGACAGCTTCATTCTATAATAGTGAAGGCACACCAATTAAAA CTGCTCGTGCAGGAGAAACAGTAACAACTAAAGCATCATTAGTTATGCATGATTATCCTTATGGAACAAGATCTGTTCTT AATAATCCGGAAGTTTATCTACGCCAATTAGAAGGAACTACGGTTAAACCATCTTCCATTAAATTAACAGACCAAGATGG CAAAGAAGTTGATTTCACAGTAGAAGCAAAAACTGCTAAAAATGGCGATAAAGTTTATGTCATTAAAACAAAAGATATAA CAGTAGGGGAATTTGTTGGTTATCCATCCAAAAAACAATATTTGAATATCAGCTATAACACCACATTTGATATGACATTA AGTAAAAGCATTCACACTGATATTCAAGAATTACTTGCTTGGGGCGGAAGTAACGTAATTTCTGCACTAGGAGCGAACGT CTTCCTAGATAATGGATTAGACGTAAACCAAAATGGTAGAGATGCGGAACGTTTACTTTCAACTAATACAAGTACTCTAA GTGTTCCGAAACAAGATACAGTTGCCGTAGAGACTTTCTTAAATGTAGCCGGAGAAGGAATTAAAGCTGGTTATGTAGAA GGCGATGACAGTACTGTTTCCTATTTCACACCTGGAACTGACGCTGATTATATGGTTAAAATTACGAATACTTCTAGCGG TAGCGCAAGTAGCTTAGATATTTTTATCCCAATTCCAAAAACTGGACAAGACTTTGGTACAAAATTCCAAAGTGAACCTT TCAAATGGGACATGAAGCTAAACGGAGAAGTTCCTATGACAGCTCAGCAAAAATCTCAGTTTGATTTAACCTATACTGCG GATGCCACTGCAGATAATTATACGTCTGATAGCATTTACAGTAATACACTCACTGATTACGGAAAAGCTAACATGGTTCG TATCAAAGTTAAAACTAAAATTGAGTCAGGCGAATCTCAAACAATCAAAGTACCACTGAAAGTAGATGAAACATTTGAAT CTGCTACAGCTGGTAACAAAATTGGTGAACGTGATGTATACAACCCTTACTATGCAGTTGAAACTAACACTTATTCTGGT TCAATCGCAGGAACTCGAGTAGGAGCAGAGTTAGTAATTGTAGAAGTAGCAGGTAAGTTATTCAAAGATAAAAACGCGAG TGGTATTTATGAAACCGCACAAGGCGATACACCACTAGCAAATGAAACAGTTGAATTATACAAATGGGATGAAGCTACAT CCACCTATGAACCATTCACCAAAGATGGACAAAATGTAACAACAACAACCGATGCCGATGGAAAATATAAGTTTGATTAT AATTTAGGAATTGGTTACGGAAAATATGCTGTGAAATTCCCTGAAAAAGCAGGTTACAAGCATACGTTACAAAATGTTGG TAGAGATAAAGACTTAAATAGTGCAGCACCAAATATGGGTACTGAAATTGGTTGGGTTAAAGATATTGATCCAGCACAAC CAGATGCTCAGCACATTAATGCAGGGTACATTTCTTACGTTCCTGAAACAGATTTAAAAGTTAACTTAAATGAAAAAACA GTTCAAGAAGGTAAGAGCCTGAAAATCACTTTACCAAAAGTAGCTCCTACAAGTGGTGAAGCAGCAGAAGATACAATTGA ACCAGACATTTTCCAAAAAATCCAAGCTAACACAGATGGGTATAAGTGGACTACAGCTGATGCTTCCGTAGCAACAGCGA AAACACTAACTGATGGTTCTGTCGCAATTGTAGGTGGTTCTACGAATGGGAAAACAATTAGGGTTACAGATTTAACAATT GCTCTTAAAGATATTTTTGGCACAGAGAAAAAATCAACTGCCCCTCTTTATGTAACAACAGCAAACGGTAAAGTTGCTCA AAAAGATGAACTTAAAATTGGAGCAACTAACTTCACATTAGAATACAAAGATGCAGTTGTCCTTAGTGAAGCACAAGCAG TAACTAAAGCCAAAACAGCAGCATTTGAAGAAGTGAAAAACGGTGTGAATTCAGACGCTGAAGATCGCACAGATGTTGTT AAAGTAGACGAACAACAATTAAAAGCTCTTAAAAACGGTTCTAACCGCGGTGGTACGTATCCACTAACATTTACTCTTGA AAAAAATGGTAAAGAAGTTGAAACAGTTATTGATGTAAAAGTAGAAAAAGACCTAACAGAAGTAAATGCTCATGATTCTA CTATTTATGTTGGAGATAACTGGCGTGCGGCTGATAACTTTGATAGTGCGCTAAATAAAGAAGGCGAAACGCTTACTTTT GCGGACATCGAGGCTACTGGAACAGTTGATACAACAAAAGCGGGTGAATATCCGGTCACTTATAAATACAATGATACTAC TAAAACAGTAACTATCACGGTAAAAGATGATGCGACCGAAATTAACGCGCATGATTCCACAATCTATACAGGCGATACTT GGAGTGCAAAAGATAACTTCGATAGCGCTGCAGATAGAGATGGAAATGAAGTAGCTTTATCAAAAGTAACAGTTACTAAT ACAGTTAATACAGCACAAGCTGGCACTTACCCAATCACGTATACGTATGGTGGTGTATCAAAAACTATTACAGTAACAGT TAAAGAAAATAAAAAAGGAATTAATGCCCATAACGCTACAATTTATGTAGGAGATAGCTGGACAGCAGAAGATAATTTTG ATAATGCTGTTGATAAAGATGGCAATCCAGTAGAATTTTCAAAAGTAACAGTAACTGAAACACCTAATGTTAATACTAAT AAAGCAGGAACTTATCAATTGAAATATACTTTTGATGGAGCTTCCAAAACAGTTACTCTTACAGTTAAAAATATTCAAAC CGCTGTTAATGCCCACAACTCCACAGTTTATGTAGGAGAAACATGGGAAGCGAAGGATAACTTCGACAGTGCACGAAATA AAGACGGAGAAACAGTCGCTTTTGCAGATGTAGAAGTAGAAGGAAATGTGGATATGACCGTAGCAGGAACATATTCAATC ACTTACAAATACGACGGTTTTTCTAAAACAATTAAAGTAACAGTTAAAAATCCACAAACTGCAATAACTGCACATGATTC TGTGGTTTATACAGGAGACAATTGGAGTGCTAAAGATAACTTTGATAGTGCAATTGATAAGGCTGGGAAACCAGTAGCTT ATAGGGATATTACGGTGGAAGAAGATCCAACAGTGGACTTAAATACACCAGGAACCTACTCAGTAACGTATAAATATCAA GGTATATCTAAAGTAGTACAAATTACTGTGAAACCAAGACAAACTAAAGTAGAATCTCACGATAGCACGATTTATGCAGG AGCAAGTTGGAACGCCAAAGACAACTTCGATTCAGCGATAGATAAAAAAGGCGATGACGTCAAACTATCTGATGTGACTG TAATTGGCCGTGTTGATAACCAAACACCAGGCACATATGAAATCACTTACCGTTATGATGGTGTAACAAGCGTTTCTCGC GTGACTGTTCTACAAAATCATGCCAAAATCATTGTTAATGATAGTAAGCTGAAAATAAATGCAGATTGGGATGCGAAAGA TAATTTCGTTCGCGCAATGTCTAGAGACGGTAGCGAAATTCCAATGTCTAAAGTAAAAGTTGAAGGTAAAGTTAATACGA AAAAAGCTGGGAAATACCAAGTAACTTATACGATTGATCCTAATGAAGGAACAGTAGATGCTGGTAAAGAAGAGCTTTCT GTTACAGCTACAATCGAAGTAGTAGAAGGAAAAGTAGCGATAACTCCATCAGAAAATAGCAATTCAGATGTAAAACCTGG TAAGCAAAAGACAGCAACATACCAACAAGCAATACCAAGAACAGGGGACCAAATGAATTTATGGGTTGTTGTAATGGGCG CTTGCCTAGTAGGATTTGCGCTGTTCCTATGGACGTTTAGACAAAGAAGACGTCACGGATAA
Upstream 100 bases:
>100_bases GCTAATGAAAACTTACGAGATTTAATGGGATTAATTAAAGAGAACGGGACTTGTATTACTGGAAAAATGGTCTAAAAAAT TTTAAAGGAGATAACTTTAT
Downstream 100 bases:
>100_bases TTGAAAGAATAGTTTCGGGGAGGTAGGTATGTCAGGTTTAGACTAGCCTACCTTTTCCGGACATTTAAACAAGTTTTTCT ATAGAGAGTTAGTTATACAG
Product: peptidoglycan binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1993_residues MMKLKSLRRPLLLVMAALLIIGQLNLSSFRVFAEEKGNESVSYEIQNELSSDKKKAKLKIKTTPKNEEVKILTIQTPDGK KVEGQEAEYTATKNGTVDFVINYQDQDKTEKTYTASYEVNDISEEVQNTPKPTVTEGNTPKKGSNLLKSSAPTVSMKIPD YNKTNWENGDIKDVSVTVEFNNNNASGKKINFTLPDGMRFVSLPVPSSYQAPSSVDSNILSYFGAGNPVGDSITSVTVPN KETGYNKATYGTLSYELDPATEKLTLNFSVQVDAAKYYGPTDLKSPIKVDAYMGEGSTPAASAEQSIRAEGKTVVGYANQ KQVDTMFRNWYTSSFLPEVSPSTATEDSYNYTKPYSVVNGISQMDGRGSKIFVPKNVKTTLYYPEGMEYVGVVNENKSLL TNNENRTITHYPNENKVEIDFKQENYYGIIETILAVKYKVPEGTEEGTYTSPKVPHAVITTYDDKVFETDALTNDASDTT TLAAKDTCKVVGKAANKMVMLPRNYYINPDNESWAGLIQINNRQTAGVKTNQIYQIKFDENWEAYTVNIPFDGTYPGNKV KDVQYKTNLNSEYRTYDGTLPKTNGNKMLTLDATAVGLQEGEYFTEVKANVGDFSVGFTNIDTAAPFKAANSASYGIVKP GITSVQFDVNIWNADDEENTKVSGSSTYTVANNISTAANGTASFYNSEGTPIKTARAGETVTTKASLVMHDYPYGTRSVL NNPEVYLRQLEGTTVKPSSIKLTDQDGKEVDFTVEAKTAKNGDKVYVIKTKDITVGEFVGYPSKKQYLNISYNTTFDMTL SKSIHTDIQELLAWGGSNVISALGANVFLDNGLDVNQNGRDAERLLSTNTSTLSVPKQDTVAVETFLNVAGEGIKAGYVE GDDSTVSYFTPGTDADYMVKITNTSSGSASSLDIFIPIPKTGQDFGTKFQSEPFKWDMKLNGEVPMTAQQKSQFDLTYTA DATADNYTSDSIYSNTLTDYGKANMVRIKVKTKIESGESQTIKVPLKVDETFESATAGNKIGERDVYNPYYAVETNTYSG SIAGTRVGAELVIVEVAGKLFKDKNASGIYETAQGDTPLANETVELYKWDEATSTYEPFTKDGQNVTTTTDADGKYKFDY NLGIGYGKYAVKFPEKAGYKHTLQNVGRDKDLNSAAPNMGTEIGWVKDIDPAQPDAQHINAGYISYVPETDLKVNLNEKT VQEGKSLKITLPKVAPTSGEAAEDTIEPDIFQKIQANTDGYKWTTADASVATAKTLTDGSVAIVGGSTNGKTIRVTDLTI ALKDIFGTEKKSTAPLYVTTANGKVAQKDELKIGATNFTLEYKDAVVLSEAQAVTKAKTAAFEEVKNGVNSDAEDRTDVV KVDEQQLKALKNGSNRGGTYPLTFTLEKNGKEVETVIDVKVEKDLTEVNAHDSTIYVGDNWRAADNFDSALNKEGETLTF ADIEATGTVDTTKAGEYPVTYKYNDTTKTVTITVKDDATEINAHDSTIYTGDTWSAKDNFDSAADRDGNEVALSKVTVTN TVNTAQAGTYPITYTYGGVSKTITVTVKENKKGINAHNATIYVGDSWTAEDNFDNAVDKDGNPVEFSKVTVTETPNVNTN KAGTYQLKYTFDGASKTVTLTVKNIQTAVNAHNSTVYVGETWEAKDNFDSARNKDGETVAFADVEVEGNVDMTVAGTYSI TYKYDGFSKTIKVTVKNPQTAITAHDSVVYTGDNWSAKDNFDSAIDKAGKPVAYRDITVEEDPTVDLNTPGTYSVTYKYQ GISKVVQITVKPRQTKVESHDSTIYAGASWNAKDNFDSAIDKKGDDVKLSDVTVIGRVDNQTPGTYEITYRYDGVTSVSR VTVLQNHAKIIVNDSKLKINADWDAKDNFVRAMSRDGSEIPMSKVKVEGKVNTKKAGKYQVTYTIDPNEGTVDAGKEELS VTATIEVVEGKVAITPSENSNSDVKPGKQKTATYQQAIPRTGDQMNLWVVVMGACLVGFALFLWTFRQRRRHG
Sequences:
NA
Specific function: NA
COG id: NA
COG function: NA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA