Click here to switch to the map view.

The map label for this gene is 39980856

Identifier: 39980856

GI number: 39980856

Start: 2093989

End: 2094156

Strand: Direct

Name: 39980856

Synonym: STM2011.1n

Alternate gene names: NA

Gene position: 2093989-2094156 (Clockwise)

Preceding gene: 16765340

Following gene: 16765368

Centisome position: 43.11

GC content: 45.83

Gene sequence:

>168_bases
ATGCCATACGTAGGGGCTCCATTTTCTCAGCGAACCGTGAAGCCTCCGATTAAGCCCCCAAAAACCATGGATGTCAAAAA
ACCCGGTAAACCCTCTCAGGTCAACCGGGTAAAGATAATTTATTGTTTTTTAAACGTCTCCGGACTCACCAGGATATCCC
GAAACTAA

Upstream 100 bases:

>100_bases
ATCACCTGGCAAGCTTGTGTGATCGCTCCGTTTGAACCGAACACATCTATATGTCAGCATACTGATACGGGTTTGATCTT
GCGGATAGCGGTATCGGTTA

Downstream 100 bases:

>100_bases
AATCTGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCTACCGACTGAACTACAGAGGA
ATCGTGTGAACGGGGCGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 55; Mature: 54

Protein sequence:

>55_residues
MPYVGAPFSQRTVKPPIKPPKTMDVKKPGKPSQVNRVKIIYCFLNVSGLTRISRN

Sequences:

>Translated_55_residues
MPYVGAPFSQRTVKPPIKPPKTMDVKKPGKPSQVNRVKIIYCFLNVSGLTRISRN
>Mature_54_residues
PYVGAPFSQRTVKPPIKPPKTMDVKKPGKPSQVNRVKIIYCFLNVSGLTRISRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6185; Mature: 6053

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYVGAPFSQRTVKPPIKPPKTMDVKKPGKPSQVNRVKIIYCFLNVSGLTRISRN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEECCC
>Mature Secondary Structure 
PYVGAPFSQRTVKPPIKPPKTMDVKKPGKPSQVNRVKIIYCFLNVSGLTRISRN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA