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The map label for this gene is yiiM [H]

Identifier: 39546389

GI number: 39546389

Start: 4267229

End: 4267918

Strand: Direct

Name: yiiM [H]

Synonym: STM4056.S

Alternate gene names: 39546389

Gene position: 4267229-4267918 (Clockwise)

Preceding gene: 16767321

Following gene: 16767323

Centisome position: 87.85

GC content: 57.1

Gene sequence:

>690_bases
ATGCATTATCCGGTTGACGTGTTTATTGGCAAAATTCGTGACTATGACGGCAGCCGCCCGAGCGCTATCGCCAAGGTGCA
AATCGACGGCGAACTCATGCTGACCGAGCTCGGTCTGGCAGGCGATCAGCAGGCCGAAAAGAAAATCCACGGCGGCCCCG
ACCGCGCGCTATGCCATTACCCCCGCGAACACTATGCTGATTGGATTCGCCAGTTCCCCGAGCAGGCGACGCTGTTTTGC
GCCCCGGCGTTTGGCGAGAATCTGTCGACGAACGGAATGACCGAACACAACGTGTTTATTGGCGACATCTACCGCTGGGG
CGAGGTGTTGATCCAGGTCACTCAGCCGCGCTCTCCATGCTTTAAACTTAATTTCCACTTTGCCATCAGCGACATGGCCC
TCCTTATGCAGAACAGCGGAAAAACCGGCTGGCTGTATCGGGTCATTGCGCCAGGTAAGGTCTCCAGCGATGCGCCGTTG
GAACTGGCGTCGCGTCTGAGCGATGTCTCGGTTCATGAAGCGGGTGTTATCGCCTGGTCTATGCCGTTTGATGACGAACA
ATATCACCGGCTGTTGAGCGCCGCCGGGCTGTCGGCGAGCTGGAGCCGCACCATGCAGAAGCGTCGTTTGAGCGGCAAAA
TTGAAGATAGCGCCAGACGACTGTGGGGGGATAAAACTCCGCCAAAATGA

Upstream 100 bases:

>100_bases
AGCAGCAGCGCGTTTCGCCGCTAAAAAATAATTTGCATTGCACGTCTGTAGAAGCGAGTCTGATGACTCGCTTTTTTTGT
ATCCGCGTAAGGAGCAGCAG

Downstream 100 bases:

>100_bases
AAGGAAGGATTATGACTGAAGCTGAAAATGCGGTGGCGATCGTAAAAGAATTTTTGGTGGCCTCGATGATTCCCGATGCT
GAACGCGCCGCAACGTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MHYPVDVFIGKIRDYDGSRPSAIAKVQIDGELMLTELGLAGDQQAEKKIHGGPDRALCHYPREHYADWIRQFPEQATLFC
APAFGENLSTNGMTEHNVFIGDIYRWGEVLIQVTQPRSPCFKLNFHFAISDMALLMQNSGKTGWLYRVIAPGKVSSDAPL
ELASRLSDVSVHEAGVIAWSMPFDDEQYHRLLSAAGLSASWSRTMQKRRLSGKIEDSARRLWGDKTPPK

Sequences:

>Translated_229_residues
MHYPVDVFIGKIRDYDGSRPSAIAKVQIDGELMLTELGLAGDQQAEKKIHGGPDRALCHYPREHYADWIRQFPEQATLFC
APAFGENLSTNGMTEHNVFIGDIYRWGEVLIQVTQPRSPCFKLNFHFAISDMALLMQNSGKTGWLYRVIAPGKVSSDAPL
ELASRLSDVSVHEAGVIAWSMPFDDEQYHRLLSAAGLSASWSRTMQKRRLSGKIEDSARRLWGDKTPPK
>Mature_229_residues
MHYPVDVFIGKIRDYDGSRPSAIAKVQIDGELMLTELGLAGDQQAEKKIHGGPDRALCHYPREHYADWIRQFPEQATLFC
APAFGENLSTNGMTEHNVFIGDIYRWGEVLIQVTQPRSPCFKLNFHFAISDMALLMQNSGKTGWLYRVIAPGKVSSDAPL
ELASRLSDVSVHEAGVIAWSMPFDDEQYHRLLSAAGLSASWSRTMQKRRLSGKIEDSARRLWGDKTPPK

Specific function: Unknown

COG id: COG2258

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Escherichia coli, GI87082350, Length=223, Percent_Identity=78.0269058295964, Blast_Score=380, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005163
- InterPro:   IPR005302
- InterPro:   IPR015808
- InterPro:   IPR011037 [H]

Pfam domain/function: PF03475 3-alpha; PF03473 MOSC [H]

EC number: NA

Molecular weight: Translated: 25720; Mature: 25720

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYPVDVFIGKIRDYDGSRPSAIAKVQIDGELMLTELGLAGDQQAEKKIHGGPDRALCHY
CCCCHHHHEEHHCCCCCCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHCCCCCCHHHCC
PREHYADWIRQFPEQATLFCAPAFGENLSTNGMTEHNVFIGDIYRWGEVLIQVTQPRSPC
CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHEEEECCCCCCE
FKLNFHFAISDMALLMQNSGKTGWLYRVIAPGKVSSDAPLELASRLSDVSVHEAGVIAWS
EEEEEEEEHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEECCCEEEEE
MPFDDEQYHRLLSAAGLSASWSRTMQKRRLSGKIEDSARRLWGDKTPPK
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MHYPVDVFIGKIRDYDGSRPSAIAKVQIDGELMLTELGLAGDQQAEKKIHGGPDRALCHY
CCCCHHHHEEHHCCCCCCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHCCCCCCHHHCC
PREHYADWIRQFPEQATLFCAPAFGENLSTNGMTEHNVFIGDIYRWGEVLIQVTQPRSPC
CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHEEEECCCCCCE
FKLNFHFAISDMALLMQNSGKTGWLYRVIAPGKVSSDAPLELASRLSDVSVHEAGVIAWS
EEEEEEEEHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEECCCEEEEE
MPFDDEQYHRLLSAAGLSASWSRTMQKRRLSGKIEDSARRLWGDKTPPK
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]