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The map label for this gene is yodC [H]

Identifier: 39546333

GI number: 39546333

Start: 2071620

End: 2071838

Strand: Reverse

Name: yodC [H]

Synonym: STM1988.S

Alternate gene names: 39546333

Gene position: 2071838-2071620 (Counterclockwise)

Preceding gene: 16765325

Following gene: 16765323

Centisome position: 42.65

GC content: 54.34

Gene sequence:

>219_bases
GTGAAAGCGTTTCATCTGATACAGGAGGCAGGTATGGTCTTTTCTGTCAGTGAGGAAGTTACCGTGAAAGAGGGTGGGCC
CCGGATGATCGTCACCGGTTATTCCAGCGGAATGGTAGAGTGTCGCTGGTATGATGGTTTTGGCGTAAAGCGGGAGGCAT
TCCATGAGAATGAGCTCGTGCCAGGCAAGGAAAGGCGCGTGCGGGACGAAGCCCGATGA

Upstream 100 bases:

>100_bases
GCCATTGTGGTGGCGCTGGTGAAAGGTGTGGCGAAAATTCGCGGTGTTTCGCACTGATTTTCTACAATGAATTATGCAAA
ATTGTCCATCCTCGTCTAAG

Downstream 100 bases:

>100_bases
CAAAACGCCCGGTTAATGCCGGGCGTTTTGCTGTGGAGAAAAAGAGTCGTCGCGCTGCGACATGCTGCTACCTGGTTATG
CCAGGATTGAGTGGTATCCC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MKAFHLIQEAGMVFSVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGFGVKREAFHENELVPGKERRVRDEAR

Sequences:

>Translated_72_residues
MKAFHLIQEAGMVFSVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGFGVKREAFHENELVPGKERRVRDEAR
>Mature_72_residues
MKAFHLIQEAGMVFSVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGFGVKREAFHENELVPGKERRVRDEAR

Specific function: Unknown

COG id: COG5475

COG function: function code S; Uncharacterized small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788267, Length=59, Percent_Identity=83.0508474576271, Blast_Score=102, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019226 [H]

Pfam domain/function: PF09926 DUF2158 [H]

EC number: NA

Molecular weight: Translated: 8221; Mature: 8221

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFHLIQEAGMVFSVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGFGVKREAFHENELV
CCHHHHHHHCCEEEECCCCEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCC
PGKERRVRDEAR
CCCCCCCCCCCC
>Mature Secondary Structure
MKAFHLIQEAGMVFSVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGFGVKREAFHENELV
CCHHHHHHHCCEEEECCCCEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCC
PGKERRVRDEAR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]