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The map label for this gene is ychP [H]

Identifier: 308065964

GI number: 308065964

Start: 1866722

End: 1868104

Strand: Reverse

Name: ychP [H]

Synonym: NA

Alternate gene names: 308065964

Gene position: 1868104-1866722 (Counterclockwise)

Preceding gene: 16765111

Following gene: 16765106

Centisome position: 38.46

GC content: 53.87

Gene sequence:

>1383_bases
TTGAGCCGTATTGTTTTTCGTTCATTCTCACTCTCGCTTCTCTTGCTGGCTGCCAGCGGTACGATCCGTGCGCAGGCGCA
AGATCCTTTCACGCAAAACCGTCTGCCGGATTTAGGCATGATGCCGGAATCCCACGAAGGGGAAAAGCATTTTGCCGAGA
TGGCCAAAGCGTTTGGCGAAGCCAGCATGAAAAATAACGATCTGGATACTGGTGAACAGGCGCGGCAATTCGCTTTCGGA
CAGGTACGCGATGTGGTCAGCGAGCAGGTTAACCAGCAGCTTGAAAGCTGGCTATCAGCCTGGGGCAGCGCCAGCGTGGA
TATTAACGTCGATAACGAAGGTCATTTTAACGGCAGTCGCGGAAGCTGGTTTATCCCTTTACAGGATAAACAGCGCTATC
TGACCTGGAGCCAGCTTGGTCTTACGCAACAGACTGACGGACTGGTAAGCAACATTGGCGTAGGACAGCGCTGGGCGCAG
GATGGCTGGCTTCTTGGCTATAATACCTTTTACGATAATCTGCTGGATGAAAATCTACAGCGCGCCGGCTTTGGCGCGGA
GGCGTGGGGAGAATATTTGCGTTTATCCGCCAACTATTATCAGCCTTTTGCCGACTGGCAGACGCATACGGCGACCTTAG
AACAGCGAATGGCGCGCGGATATGATATCAACGCGCAAATGCGCCTGCCGTTTTACCAGCATATCAATACCAGCGTTAGT
CTGGAGCAGTACTTTGGCGATAGCGTGGATCTGTTTGACTCCGGAACGGGGTATCACAATCCTGTCGCGTTAAAACTGGG
TCTCAACTATACGCCAGTACCTTTGCTTACCATGACCGCCCAGCACAAACAGGGCGAGAGCGGGGTCAGTCAAAATAACC
TGGGGCTGACGCTTAACTACCGCTTCGGCGTGCCGCTCAAAAAGCAGCTTGCCGCCAGTGAAGTGGCGCAAAGCCAGTCA
TTACGCGGTAGCCGCTATGATACGCCGCAACGTAACTCGCTGCCGACAATGGAGTATCGGCAGCGTAAAACGTTAACGGT
TTTTCTGGCGACGCCGCCCTGGGATCTTACGCCTGGTGAGACGGTTGCGTTAAAATTGCAGGTGCGCAGCGTGCACGGTA
TTCGTCATTTGAGCTGGCAGGGCGATACACAGGCATTAAGTTTGACGGCAGGAACGGACACCCGCAGTACCGAGGGCTGG
ACAATCATTATGCCGGCCTGGGATCACCGCGAAGGCGCGGCAAATCGCTGGCGTTTATCGGTGGTGGTTGAGGATGAAAA
AGGTCAGCGTGTCTCTTCCAATGAGATCACGCTCGCGCTGACTGAACCGTTTATCACGATGCCGGACGATAATCCGCATT
GGCAACCGTTCCAGGAGCAATAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:
NA

Sequences:

>Translated_460_residues
MSRIVFRSFSLSLLLLAASGTIRAQAQDPFTQNRLPDLGMMPESHEGEKHFAEMAKAFGEASMKNNDLDTGEQARQFAFG
QVRDVVSEQVNQQLESWLSAWGSASVDINVDNEGHFNGSRGSWFIPLQDKQRYLTWSQLGLTQQTDGLVSNIGVGQRWAQ
DGWLLGYNTFYDNLLDENLQRAGFGAEAWGEYLRLSANYYQPFADWQTHTATLEQRMARGYDINAQMRLPFYQHINTSVS
LEQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLLTMTAQHKQGESGVSQNNLGLTLNYRFGVPLKKQLAASEVAQSQS
LRGSRYDTPQRNSLPTMEYRQRKTLTVFLATPPWDLTPGETVALKLQVRSVHGIRHLSWQGDTQALSLTAGTDTRSTEGW
TIIMPAWDHREGAANRWRLSVVVEDEKGQRVSSNEITLALTEPFITMPDDNPHWQPFQEQ
>Mature_459_residues
SRIVFRSFSLSLLLLAASGTIRAQAQDPFTQNRLPDLGMMPESHEGEKHFAEMAKAFGEASMKNNDLDTGEQARQFAFGQ
VRDVVSEQVNQQLESWLSAWGSASVDINVDNEGHFNGSRGSWFIPLQDKQRYLTWSQLGLTQQTDGLVSNIGVGQRWAQD
GWLLGYNTFYDNLLDENLQRAGFGAEAWGEYLRLSANYYQPFADWQTHTATLEQRMARGYDINAQMRLPFYQHINTSVSL
EQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLLTMTAQHKQGESGVSQNNLGLTLNYRFGVPLKKQLAASEVAQSQSL
RGSRYDTPQRNSLPTMEYRQRKTLTVFLATPPWDLTPGETVALKLQVRSVHGIRHLSWQGDTQALSLTAGTDTRSTEGWT
IIMPAWDHREGAANRWRLSVVVEDEKGQRVSSNEITLALTEPFITMPDDNPHWQPFQEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intimin/invasin family [H]

Homologues:

Organism=Escherichia coli, GI145693120, Length=464, Percent_Identity=74.7844827586207, Blast_Score=697, Evalue=0.0,
Organism=Escherichia coli, GI145693153, Length=407, Percent_Identity=29.97542997543, Blast_Score=168, Evalue=5e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51861; Mature: 51730

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIVFRSFSLSLLLLAASGTIRAQAQDPFTQNRLPDLGMMPESHEGEKHFAEMAKAFGE
CCCEEEEHHCEEEEEEECCCCEEECCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC
ASMKNNDLDTGEQARQFAFGQVRDVVSEQVNQQLESWLSAWGSASVDINVDNEGHFNGSR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
GSWFIPLQDKQRYLTWSQLGLTQQTDGLVSNIGVGQRWAQDGWLLGYNTFYDNLLDENLQ
CEEEEEECCCCCEEEHHHCCCCCCCCCHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
RAGFGAEAWGEYLRLSANYYQPFADWQTHTATLEQRMARGYDINAQMRLPFYQHINTSVS
HCCCCHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHCCCCEE
LEQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLLTMTAQHKQGESGVSQNNLGLTLNY
HHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEE
RFGVPLKKQLAASEVAQSQSLRGSRYDTPQRNSLPTMEYRQRKTLTVFLATPPWDLTPGE
EECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCC
TVALKLQVRSVHGIRHLSWQGDTQALSLTAGTDTRSTEGWTIIMPAWDHREGAANRWRLS
EEEEEEEEEEECCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEE
VVVEDEKGQRVSSNEITLALTEPFITMPDDNPHWQPFQEQ
EEEECCCCCEECCCCEEEEEECCEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SRIVFRSFSLSLLLLAASGTIRAQAQDPFTQNRLPDLGMMPESHEGEKHFAEMAKAFGE
CCEEEEHHCEEEEEEECCCCEEECCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC
ASMKNNDLDTGEQARQFAFGQVRDVVSEQVNQQLESWLSAWGSASVDINVDNEGHFNGSR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
GSWFIPLQDKQRYLTWSQLGLTQQTDGLVSNIGVGQRWAQDGWLLGYNTFYDNLLDENLQ
CEEEEEECCCCCEEEHHHCCCCCCCCCHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
RAGFGAEAWGEYLRLSANYYQPFADWQTHTATLEQRMARGYDINAQMRLPFYQHINTSVS
HCCCCHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHCCCCEE
LEQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLLTMTAQHKQGESGVSQNNLGLTLNY
HHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEE
RFGVPLKKQLAASEVAQSQSLRGSRYDTPQRNSLPTMEYRQRKTLTVFLATPPWDLTPGE
EECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCC
TVALKLQVRSVHGIRHLSWQGDTQALSLTAGTDTRSTEGWTIIMPAWDHREGAANRWRLS
EEEEEEEEEEECCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEE
VVVEDEKGQRVSSNEITLALTEPFITMPDDNPHWQPFQEQ
EEEECCCCCEECCCCEEEEEECCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2657652; 2649492; 7567469 [H]