Click here to switch to the map view.

The map label for this gene is yhbQ [H]

Identifier: 308065954

GI number: 308065954

Start: 3438746

End: 3439048

Strand: Direct

Name: yhbQ [H]

Synonym: NA

Alternate gene names: 308065954

Gene position: 3438746-3439048 (Clockwise)

Preceding gene: 16766567

Following gene: 16766572

Centisome position: 70.79

GC content: 55.45

Gene sequence:

>303_bases
ATGACCCCCTGGTATCTGTATCTGATTCGTACTGCAGACAATGCGCTTTACACCGGAATAACCACCGATGTGGCGCGTCG
TTACAGGCAGCATCAAACGGGAAAAGGCGCAAAAGCATTACGGGGAAAAGGCGAGTTAACGCTGGCGTTTGCGGCGCAGG
TCGGCGATCGCTCGCTGGCCCTGCGCATAGAGTATCGCATCAAACAGCTCACAAAGCGCCAGAAAGAGCGCCTTGTGACG
GAACGCGAAGCGTTTGAGGCGCTGCTGTCCAGCCTGCAAACGCCGGTGCTTAAAAACGATTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: GIY-YIG nuclease superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:
NA

Sequences:

>Translated_100_residues
MTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQKERLVT
EREAFEALLSSLQTPVLKND
>Mature_99_residues
TPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQKERLVTE
REAFEALLSSLQTPVLKND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=100, Percent_Identity=81, Blast_Score=167, Evalue=8e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022992
- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 11454; Mature: 11323

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLA
CCCEEEEEEEECCCCEECCHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEE
LRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTPVLKND
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLA
CCEEEEEEEECCCCEECCHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEE
LRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTPVLKND
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA