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The map label for this gene is rsmC [H]

Identifier: 16767797

GI number: 16767797

Start: 4811138

End: 4812166

Strand: Reverse

Name: rsmC [H]

Synonym: STM4556

Alternate gene names: 16767797

Gene position: 4812166-4811138 (Counterclockwise)

Preceding gene: 16767806

Following gene: 16767795

Centisome position: 99.07

GC content: 57.24

Gene sequence:

>1029_bases
ATGTCTGCTTTTACCCCGGCAAGTGAAGTCTTGCTGCGCCACAGTGATGATTTCGAACAAAGCCGTATTCTTTTTGCCGG
AGATTTGCAGGATGACCTGCCCGCGCGCTTTGAATGCGCCGCCAGCCGCGCGCATACGCAACAGTTTCACCACTGGCAGG
TATTAAGCCGCCAGATGGGCGATAACGTCCGTTTTAGCCTGGTCGCGCAAGCCAGCGATGTCGCTGACTGCGATACGCTG
ATCTACTACTGGCCGAAAAATAAACCCGAAGCGCAGTTCCAGTTGATGAATATTTTGTCGCTGATGCCGTCGGGCGTCGA
TGTTTTCGTCGTGGGAGAAAACCGCAGCGGCGTGCGTAGCGCCGAACCGATGCTGGCGGACTATGCGCCGCTGAACAAAG
TAGATAGCGCGCGACGTTGCGGCCTTTACCATGGCCGTCTGGAAAAGCAGCCGCAGTTTAGTCTTGAATCCTGGTGGGCC
GAGTACAACATCGACGGGCTGACCATCAAAACGTTGCCGGGCGTATTCAGCCGCGACGGACTGGATGTTGGTAGCCAACT
GCTGCTGTCTACGCTGACGCCGCACACCAAAGGTAAAGTGCTGGATGTCGGCTGCGGCGCTGGCGTGCTTTCCGCCGCGC
TGGCCAGCCATTCGCCGAAAGTGCGCCTGACGCTGTGTGATGTCAGCGCTCCGGCGGTGGAAGCCAGCCGCGCCACGCTT
GCCGCTAATGGTCTTGAAGGCGAGGTATTCGCCAGCAACGTCTTTTCGGAAGTCAAAGGACGTTTTGACATGATCATCTC
CAACCCGCCGTTCCACGACGGAATGCAAACCAGCCTCGATGCGGCGCAAACGCTCATTCGCGGCGCAGTGCGCCATCTGA
ACAGCGGCGGAGAGTTACGCATCGTGGCGAACGCCTTTCTGCCCTATCCTAAGATTCTGGATGAGACTTTTGGCTTCCAT
GAAGTCATCGCGCAAACCGGGCGCTTTAAGGTTTATCGTACCGTGATGACCCGTCAGGCGAAGAAATAG

Upstream 100 bases:

>100_bases
CGAAACGCTCCTGTAATCAGGGGCGCAAATATAGCAAATCTGTCGAATCTGCGCCATCAAACTACTATAATCGCCGCCAG
TCTGAATTAAGGAGCATTCC

Downstream 100 bases:

>100_bases
TTGGCCTGATAAGCGCAGCGCCATCTGGTTGCATGTGCCGGATGGCGACGCAAAGCGTCTTATCCAACCTACGTCTCGCG
TCCATTTTTGCAGCAATCAA

Product: 16S ribosomal RNA m2G1207 methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARFECAASRAHTQQFHHWQVLSRQMGDNVRFSLVAQASDVADCDTL
IYYWPKNKPEAQFQLMNILSLMPSGVDVFVVGENRSGVRSAEPMLADYAPLNKVDSARRCGLYHGRLEKQPQFSLESWWA
EYNIDGLTIKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATL
AANGLEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPKILDETFGFH
EVIAQTGRFKVYRTVMTRQAKK

Sequences:

>Translated_342_residues
MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARFECAASRAHTQQFHHWQVLSRQMGDNVRFSLVAQASDVADCDTL
IYYWPKNKPEAQFQLMNILSLMPSGVDVFVVGENRSGVRSAEPMLADYAPLNKVDSARRCGLYHGRLEKQPQFSLESWWA
EYNIDGLTIKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATL
AANGLEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPKILDETFGFH
EVIAQTGRFKVYRTVMTRQAKK
>Mature_341_residues
SAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARFECAASRAHTQQFHHWQVLSRQMGDNVRFSLVAQASDVADCDTLI
YYWPKNKPEAQFQLMNILSLMPSGVDVFVVGENRSGVRSAEPMLADYAPLNKVDSARRCGLYHGRLEKQPQFSLESWWAE
YNIDGLTIKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLA
ANGLEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPKILDETFGFHE
VIAQTGRFKVYRTVMTRQAKK

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=342, Percent_Identity=90.9356725146199, Blast_Score=655, Evalue=0.0,
Organism=Escherichia coli, GI87082206, Length=194, Percent_Identity=32.4742268041237, Blast_Score=101, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 37616; Mature: 37485

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARFECAASRAHTQQFHHWQVLSRQMG
CCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
DNVRFSLVAQASDVADCDTLIYYWPKNKPEAQFQLMNILSLMPSGVDVFVVGENRSGVRS
CCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
AEPMLADYAPLNKVDSARRCGLYHGRLEKQPQFSLESWWAEYNIDGLTIKTLPGVFSRDG
CCCHHHHCCCCCCCCHHHHCCCHHCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCC
LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATL
CCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCCEE
AANGLEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELR
EECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
IVANAFLPYPKILDETFGFHEVIAQTGRFKVYRTVMTRQAKK
EEEECCCCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARFECAASRAHTQQFHHWQVLSRQMG
CCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
DNVRFSLVAQASDVADCDTLIYYWPKNKPEAQFQLMNILSLMPSGVDVFVVGENRSGVRS
CCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
AEPMLADYAPLNKVDSARRCGLYHGRLEKQPQFSLESWWAEYNIDGLTIKTLPGVFSRDG
CCCHHHHCCCCCCCCHHHHCCCHHCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCC
LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATL
CCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCCEE
AANGLEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELR
EECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
IVANAFLPYPKILDETFGFHEVIAQTGRFKVYRTVMTRQAKK
EEEECCCCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA