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The map label for this gene is ytgA

Identifier: 16767717

GI number: 16767717

Start: 4714391

End: 4714879

Strand: Reverse

Name: ytgA

Synonym: STM4472

Alternate gene names: 16767717

Gene position: 4714879-4714391 (Counterclockwise)

Preceding gene: 16767718

Following gene: 16767714

Centisome position: 97.07

GC content: 38.24

Gene sequence:

>489_bases
ATGAAACGCCTATTATCAGCAATTGTTTTCCCCGCTATGTTTATTAGTATCTCTAATGTATATGCATTAGATATACAGCC
CGGCGAATGGAAAATGGAAAATATAGAAATGCGCACCATCAATCCAGATACAAAAGAAGTATTAATGGATGAAAAAAATT
CGGGCATAGCGACGCTTATGTGTTATACCCCTAAAATGTCTGAAGATTCTAAAAAAATGGTGAAGGGTTTTTCTACCAGT
GCAGGCGGTTGCACGACAACATTTGTAGAAAGTACGGATACCAAACTGATCAATGAGACTGTCTGTAATAATCCTGATGT
CAAATCGCACTCTATTGTAGAAACGACGAAAATAAGCGATACAGAATTTGCGATGACCATGAAATCGGATGTCGATGCAG
GAGGTAATAAAACAACCTCCATCAACAAAATTAAACAAACCTTTGTTGGCAAGACCTGCTCTGAAGCGTCAAAAGGCGTG
AAACAGTAA

Upstream 100 bases:

>100_bases
GGCGTTTATTTATCCTCGCCAGGTATTATTTTTGCTGATATAAATAATCCCGGAAACATCCTGTTATCCGGGAATCACTT
ATTATTCAAGGAAGTTATAA

Downstream 100 bases:

>100_bases
GTATTTCAACACAAGAACCCGTAGTGATGATGCAAAAATGGCATTGTTCACGGTCACCTTTCGGGAATATAACACTGAGT
GAGTTCTTTTTGCCTGCCGC

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKRLLSAIVFPAMFISISNVYALDIQPGEWKMENIEMRTINPDTKEVLMDEKNSGIATLMCYTPKMSEDSKKMVKGFSTS
AGGCTTTFVESTDTKLINETVCNNPDVKSHSIVETTKISDTEFAMTMKSDVDAGGNKTTSINKIKQTFVGKTCSEASKGV
KQ

Sequences:

>Translated_162_residues
MKRLLSAIVFPAMFISISNVYALDIQPGEWKMENIEMRTINPDTKEVLMDEKNSGIATLMCYTPKMSEDSKKMVKGFSTS
AGGCTTTFVESTDTKLINETVCNNPDVKSHSIVETTKISDTEFAMTMKSDVDAGGNKTTSINKIKQTFVGKTCSEASKGV
KQ
>Mature_162_residues
MKRLLSAIVFPAMFISISNVYALDIQPGEWKMENIEMRTINPDTKEVLMDEKNSGIATLMCYTPKMSEDSKKMVKGFSTS
AGGCTTTFVESTDTKLINETVCNNPDVKSHSIVETTKISDTEFAMTMKSDVDAGGNKTTSINKIKQTFVGKTCSEASKGV
KQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTGA_SALTI (P0A1V1)

Other databases:

- EMBL:   AL627283
- EMBL:   AE014613
- RefSeq:   NP_458890.1
- RefSeq:   NP_808094.1
- GeneID:   1067540
- GeneID:   1251014
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t4507
- KEGG:   sty:STY4811
- HOGENOM:   HBG674394
- OMA:   AKSHSIV
- ProtClustDB:   CLSK894635
- BioCyc:   SENT209261:T4507-MONOMER
- BioCyc:   SENT220341:STY4811-MONOMER
- InterPro:   IPR022061

Pfam domain/function: PF12276 DUF3617

EC number: NA

Molecular weight: Translated: 17772; Mature: 17772

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLSAIVFPAMFISISNVYALDIQPGEWKMENIEMRTINPDTKEVLMDEKNSGIATLM
CHHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCEEEEEECCCHHHHHHCCCCCCEEEEE
CYTPKMSEDSKKMVKGFSTSAGGCTTTFVESTDTKLINETVCNNPDVKSHSIVETTKISD
EECCCCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEECCCC
TEFAMTMKSDVDAGGNKTTSINKIKQTFVGKTCSEASKGVKQ
CCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCC
>Mature Secondary Structure
MKRLLSAIVFPAMFISISNVYALDIQPGEWKMENIEMRTINPDTKEVLMDEKNSGIATLM
CHHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCEEEEEECCCHHHHHHCCCCCCEEEEE
CYTPKMSEDSKKMVKGFSTSAGGCTTTFVESTDTKLINETVCNNPDVKSHSIVETTKISD
EECCCCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEECCCC
TEFAMTMKSDVDAGGNKTTSINKIKQTFVGKTCSEASKGVKQ
CCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504