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The map label for this gene is treC [H]

Identifier: 16767699

GI number: 16767699

Start: 4695100

End: 4696752

Strand: Reverse

Name: treC [H]

Synonym: STM4453

Alternate gene names: 16767699

Gene position: 4696752-4695100 (Counterclockwise)

Preceding gene: 16767700

Following gene: 16767698

Centisome position: 96.69

GC content: 55.23

Gene sequence:

>1653_bases
ATGACTATTCCCCTCTGGTGGCAAAACGGCGTTATTTATCAGATCTACCCAAAAAGTTTTCAGGACACGACCGGCAGCGG
CACCGGCGATTTACGCGGCGTCACGCAGCGCCTTGACTATCTACAGCGACTCGGCGTGGACGCCATCTGGCTCACGCCGT
TTTATATCTCGCCGCAGGTGGATAACGGTTATGACGTCGCAAATTATACGGCTATCGACCCGACCTACGGCACGCTGGAT
GATTTTGACGAGCTGGTCGCGCAGGCGAAAGCACGCGGTATTCGTATCATCCTGGATATGGTGTTTAACCATACTTCTAC
CCAGCACGCCTGGTTTCGCGAAGCGCTGAACAAAGAGAGTCCATACCGTCAGTTTTATATCTGGCGCGATGGCACGCCGG
ATGTCTGCCCGAATAACTGGCAATCCAAATTTGGCGGCAGCGCCTGGCGCTGGCATAGCCAGAGCGAACAATATTATTTA
CACCTTTTCGCGCCTGAACAGGCCGACCTGAACTGGGAAAACCCCGCCGTACGCGCCGAGCTGAAAAAGGTCTGCGAATT
CTGGGCCGATCGCGGCGTGGATGGCCTGCGTCTGGACGTGGTGAACCTGATCGCCAAAGATCAGAATTTTCCTGACGATC
CGACGGGCGATGGACGCCGCTTTTATACCGACGGGCCGCGCGCGCATACGTTTTTACGCGAAATGAACCGTGACGTTTTT
ACGCCGCGTAATCTGATGACGGTAGGCGAAATGTCCTCTACCACGCTGGAAAACTGCCAGCAATATGCCGCGCTTAGCGG
CGACGAACTCTCGATGACCTTCAATTTTCATCATCTGAAGGTGGATTACCCCAATGGCGAAAAGTGGACGCTGGCAAAAC
CTGATTATGTGGCGCTGAAAGCGTTGTTCCGCCACTGGCAACAGGGGATGCATAACGTCGCCTGGAACGCGTTATTCTGG
TGTAATCACGATCAGCCGCGCATCGTTTCCCGCTTTGGCGACGAGGGTGAATACCGGGTTCCAGCCGCGAAAATGTTGGC
GATGGCGCTGCACGGTATGCAAGGGACGCCTTATATCTATCAGGGCGAAGAAATCGGCATGACCAACCCACACTTTACCC
GCATCACCGATTATCGCGACGTGGAAAGCCATAACATGTTTGCCGCGCTACGCGCCGCCGGGCGCGACCCCGACGAACTG
CTGGCTATTCTGGCCAGTAAATCCCGCGACAACAGCCGCACGCCGATGCAATGGGACAACGGTAAAAACGCCGGTTTCAC
CCAAGGCGAGCCGTGGATAAGCCTGTGCGATAACTATACGGAGGTTAACGTCGAGGCGGCATTACGCGATGAAAACTCGG
TGTTTTACACCTATCAAAAGCTGATTGCGCTACGTAAAACCCAGCCTGTACTGATCTGGGGCGATTATCAGGATCTCCTC
CCGGATAGCCCATCAGTATGGTGTTATCGCCGCCAGTGGCAGGGGCAAATCCTGCTGGTTGTCGCCAATCTGAGTAACCA
GTGCCAGGAGTGGCATCCGCCGCATATCAAAGGACAGTGGCAGGCGCTACTGCATAATTATGGCGAGGTCGCCAGCCAGC
CAGCCGCGATGACGCTCCGCCCATTTGAAGCCATCTGGTGGTTACAACGCTAA

Upstream 100 bases:

>100_bases
ACCTTTATCTATCAGCGTAAGCATCGTCAGGGCACATTACAAATTGTCTAATACTTCTTCGGGGCGCAGTTGCGTCCCAA
CGCACTTGCAGGAAACAACA

Downstream 100 bases:

>100_bases
CGCGACATCCTTATACGGATAAACGCCACAAACCTATTGACACGGGCTGTGGCGTTGCTCCAGGTTACTGACTGTTTTTG
TTGAATAATTAATCAGATTT

Product: trehalose-6-phosphate hydrolase

Products: NA

Alternate protein names: Alpha,alpha-phosphotrehalase [H]

Number of amino acids: Translated: 550; Mature: 549

Protein sequence:

>550_residues
MTIPLWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLQRLGVDAIWLTPFYISPQVDNGYDVANYTAIDPTYGTLD
DFDELVAQAKARGIRIILDMVFNHTSTQHAWFREALNKESPYRQFYIWRDGTPDVCPNNWQSKFGGSAWRWHSQSEQYYL
HLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLIAKDQNFPDDPTGDGRRFYTDGPRAHTFLREMNRDVF
TPRNLMTVGEMSSTTLENCQQYAALSGDELSMTFNFHHLKVDYPNGEKWTLAKPDYVALKALFRHWQQGMHNVAWNALFW
CNHDQPRIVSRFGDEGEYRVPAAKMLAMALHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESHNMFAALRAAGRDPDEL
LAILASKSRDNSRTPMQWDNGKNAGFTQGEPWISLCDNYTEVNVEAALRDENSVFYTYQKLIALRKTQPVLIWGDYQDLL
PDSPSVWCYRRQWQGQILLVVANLSNQCQEWHPPHIKGQWQALLHNYGEVASQPAAMTLRPFEAIWWLQR

Sequences:

>Translated_550_residues
MTIPLWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLQRLGVDAIWLTPFYISPQVDNGYDVANYTAIDPTYGTLD
DFDELVAQAKARGIRIILDMVFNHTSTQHAWFREALNKESPYRQFYIWRDGTPDVCPNNWQSKFGGSAWRWHSQSEQYYL
HLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLIAKDQNFPDDPTGDGRRFYTDGPRAHTFLREMNRDVF
TPRNLMTVGEMSSTTLENCQQYAALSGDELSMTFNFHHLKVDYPNGEKWTLAKPDYVALKALFRHWQQGMHNVAWNALFW
CNHDQPRIVSRFGDEGEYRVPAAKMLAMALHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESHNMFAALRAAGRDPDEL
LAILASKSRDNSRTPMQWDNGKNAGFTQGEPWISLCDNYTEVNVEAALRDENSVFYTYQKLIALRKTQPVLIWGDYQDLL
PDSPSVWCYRRQWQGQILLVVANLSNQCQEWHPPHIKGQWQALLHNYGEVASQPAAMTLRPFEAIWWLQR
>Mature_549_residues
TIPLWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLQRLGVDAIWLTPFYISPQVDNGYDVANYTAIDPTYGTLDD
FDELVAQAKARGIRIILDMVFNHTSTQHAWFREALNKESPYRQFYIWRDGTPDVCPNNWQSKFGGSAWRWHSQSEQYYLH
LFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLIAKDQNFPDDPTGDGRRFYTDGPRAHTFLREMNRDVFT
PRNLMTVGEMSSTTLENCQQYAALSGDELSMTFNFHHLKVDYPNGEKWTLAKPDYVALKALFRHWQQGMHNVAWNALFWC
NHDQPRIVSRFGDEGEYRVPAAKMLAMALHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESHNMFAALRAAGRDPDELL
AILASKSRDNSRTPMQWDNGKNAGFTQGEPWISLCDNYTEVNVEAALRDENSVFYTYQKLIALRKTQPVLIWGDYQDLLP
DSPSVWCYRRQWQGQILLVVANLSNQCQEWHPPHIKGQWQALLHNYGEVASQPAAMTLRPFEAIWWLQR

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=560, Percent_Identity=29.6428571428571, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI65506891, Length=107, Percent_Identity=36.4485981308411, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI61744475, Length=107, Percent_Identity=36.4485981308411, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI61744481, Length=107, Percent_Identity=36.4485981308411, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI61744479, Length=107, Percent_Identity=36.4485981308411, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI61744483, Length=107, Percent_Identity=36.4485981308411, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI61744477, Length=107, Percent_Identity=36.4485981308411, Blast_Score=73, Evalue=6e-13,
Organism=Escherichia coli, GI1790687, Length=548, Percent_Identity=84.4890510948905, Blast_Score=990, Evalue=0.0,
Organism=Escherichia coli, GI1786604, Length=186, Percent_Identity=32.258064516129, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1789995, Length=184, Percent_Identity=28.804347826087, Blast_Score=65, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI25147709, Length=490, Percent_Identity=25.9183673469388, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI32565753, Length=522, Percent_Identity=22.7969348659004, Blast_Score=111, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6321726, Length=578, Percent_Identity=36.159169550173, Blast_Score=365, Evalue=1e-102,
Organism=Saccharomyces cerevisiae, GI6322245, Length=584, Percent_Identity=35.958904109589, Blast_Score=361, Evalue=1e-100,
Organism=Saccharomyces cerevisiae, GI6322241, Length=578, Percent_Identity=36.5051903114187, Blast_Score=354, Evalue=3e-98,
Organism=Saccharomyces cerevisiae, GI6322021, Length=578, Percent_Identity=36.5051903114187, Blast_Score=354, Evalue=3e-98,
Organism=Saccharomyces cerevisiae, GI6324416, Length=578, Percent_Identity=36.5051903114187, Blast_Score=353, Evalue=3e-98,
Organism=Saccharomyces cerevisiae, GI6321731, Length=588, Percent_Identity=35.2040816326531, Blast_Score=338, Evalue=1e-93,
Organism=Saccharomyces cerevisiae, GI6319776, Length=588, Percent_Identity=35.0340136054422, Blast_Score=337, Evalue=3e-93,
Organism=Drosophila melanogaster, GI24583745, Length=538, Percent_Identity=36.2453531598513, Blast_Score=301, Evalue=1e-81,
Organism=Drosophila melanogaster, GI24583747, Length=542, Percent_Identity=35.0553505535055, Blast_Score=292, Evalue=3e-79,
Organism=Drosophila melanogaster, GI24583749, Length=542, Percent_Identity=35.0553505535055, Blast_Score=292, Evalue=4e-79,
Organism=Drosophila melanogaster, GI221330053, Length=498, Percent_Identity=36.3453815261044, Blast_Score=289, Evalue=4e-78,
Organism=Drosophila melanogaster, GI45549022, Length=541, Percent_Identity=33.641404805915, Blast_Score=275, Evalue=5e-74,
Organism=Drosophila melanogaster, GI24586599, Length=582, Percent_Identity=32.3024054982818, Blast_Score=271, Evalue=7e-73,
Organism=Drosophila melanogaster, GI24586597, Length=537, Percent_Identity=33.8919925512104, Blast_Score=269, Evalue=3e-72,
Organism=Drosophila melanogaster, GI24586587, Length=500, Percent_Identity=34, Blast_Score=267, Evalue=1e-71,
Organism=Drosophila melanogaster, GI24586589, Length=515, Percent_Identity=35.3398058252427, Blast_Score=260, Evalue=2e-69,
Organism=Drosophila melanogaster, GI24586593, Length=501, Percent_Identity=33.7325349301397, Blast_Score=257, Evalue=1e-68,
Organism=Drosophila melanogaster, GI24586591, Length=579, Percent_Identity=31.0880829015544, Blast_Score=255, Evalue=6e-68,
Organism=Drosophila melanogaster, GI281360393, Length=446, Percent_Identity=31.6143497757848, Blast_Score=189, Evalue=6e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR012769 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.93 [H]

Molecular weight: Translated: 63635; Mature: 63504

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPLWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLQRLGVDAIWLTPFYISPQV
CEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC
DNGYDVANYTAIDPTYGTLDDFDELVAQAKARGIRIILDMVFNHTSTQHAWFREALNKES
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCHHHHHHHHHCCCC
PYRQFYIWRDGTPDVCPNNWQSKFGGSAWRWHSQSEQYYLHLFAPEQADLNWENPAVRAE
CCEEEEEEECCCCCCCCCCCHHHCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHH
LKKVCEFWADRGVDGLRLDVVNLIAKDQNFPDDPTGDGRRFYTDGPRAHTFLREMNRDVF
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCC
TPRNLMTVGEMSSTTLENCQQYAALSGDELSMTFNFHHLKVDYPNGEKWTLAKPDYVALK
CCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCEEEECCCCHHHHH
ALFRHWQQGMHNVAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLAMALHGMQGTPYIY
HHHHHHHHHHHHHHCEEEEEECCCCCHHHHHCCCCCCEECCHHHHHHHHHHCCCCCCEEE
QGEEIGMTNPHFTRITDYRDVESHNMFAALRAAGRDPDELLAILASKSRDNSRTPMQWDN
ECCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
GKNAGFTQGEPWISLCDNYTEVNVEAALRDENSVFYTYQKLIALRKTQPVLIWGDYQDLL
CCCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCEEHHHHHHHHHHCCCCEEEECCHHHHC
PDSPSVWCYRRQWQGQILLVVANLSNQCQEWHPPHIKGQWQALLHNYGEVASQPAAMTLR
CCCCCEEEEEECCCCEEEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
PFEAIWWLQR
HHHHHHEECC
>Mature Secondary Structure 
TIPLWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLQRLGVDAIWLTPFYISPQV
EEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC
DNGYDVANYTAIDPTYGTLDDFDELVAQAKARGIRIILDMVFNHTSTQHAWFREALNKES
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCHHHHHHHHHCCCC
PYRQFYIWRDGTPDVCPNNWQSKFGGSAWRWHSQSEQYYLHLFAPEQADLNWENPAVRAE
CCEEEEEEECCCCCCCCCCCHHHCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHH
LKKVCEFWADRGVDGLRLDVVNLIAKDQNFPDDPTGDGRRFYTDGPRAHTFLREMNRDVF
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCC
TPRNLMTVGEMSSTTLENCQQYAALSGDELSMTFNFHHLKVDYPNGEKWTLAKPDYVALK
CCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCEEEECCCCHHHHH
ALFRHWQQGMHNVAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLAMALHGMQGTPYIY
HHHHHHHHHHHHHHCEEEEEECCCCCHHHHHCCCCCCEECCHHHHHHHHHHCCCCCCEEE
QGEEIGMTNPHFTRITDYRDVESHNMFAALRAAGRDPDELLAILASKSRDNSRTPMQWDN
ECCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
GKNAGFTQGEPWISLCDNYTEVNVEAALRDENSVFYTYQKLIALRKTQPVLIWGDYQDLL
CCCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCEEHHHHHHHHHHCCCCEEEECCHHHHC
PDSPSVWCYRRQWQGQILLVVANLSNQCQEWHPPHIKGQWQALLHNYGEVASQPAAMTLR
CCCCCEEEEEECCCCEEEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
PFEAIWWLQR
HHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8083158; 7610040; 9278503; 8421692 [H]