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The map label for this gene is dgoT [H]

Identifier: 16767658

GI number: 16767658

Start: 4651963

End: 4653171

Strand: Reverse

Name: dgoT [H]

Synonym: STM4412

Alternate gene names: 16767658

Gene position: 4653171-4651963 (Counterclockwise)

Preceding gene: 16767659

Following gene: 16767654

Centisome position: 95.79

GC content: 47.56

Gene sequence:

>1209_bases
ATGACCTCAATGCAAAAATGGCTACGGATCGGCGCGACATTAATGTTCGGCCTTTTTGTTGCTTATCTTGACCGTTCTAA
TCTTTCCGTTACGTTACCTACGATTACACACGACCTGAATATTGATGGCGCAACGGCCAGCATTGTATTAACCATATTTC
TTATTGGCTATGCCTTTTCAAATATTTTTGGCGGCGTATTTACCCAGCGATACGATCCGAAAAAAATAGTCATTCTGATG
GTGCTAATCTGGTCGATTGCGACCGTTTTTGTCGGATTTACCTCGTCAGTGTACGTTATTTTGATTTGTCGGCTGGTGCT
TGGCATTACCGAAGGCATTTATTGGCCGCAGCAGTCCCGCTTCGCCAGCGACTGGTTTTCAGACAAAGAACGGACGCAGG
CGAACAGCATTATCCAGTATTATGGACAGTTCCTGGCATTAGGCCTGGGATTTATGATTTTGTCCCCGCTGGATGCTGCC
TTCGGTTGGCGAAATGTTTTTATTATCACTGGTGTGATCGGCATTGTTGTTGTGGTTCCACTTTATATAACAATGCTGAA
AAAACAGGAAGAAGCGCCTTATTATCGTGCGCCGGCGCCAACAGAGAAAACTAAACTTACCCTGGAATCGCTGGGCGGAA
CCCCCTTCCTACTCCTTATTTTTACCTACATCACTCAAGGGATGTTGTTCTGGGGAATTACGTTATGGATACCCATGGTT
GTCAATTCTCTCGGCTATACCGGATTCAGTAAAGCATTGGTCAGTTCTCTGCCTTATCTGACTGCGGTTATACTGGCAAT
CCCTATCTCATGGATCAGTGATAAGACACAAAAACGTGTACTTATTGCTTCACTGGGCCTACTAATCCCCGGCGTGATGT
TATTTCTCCTGCCATTTGTCGATGCGCCGGGCTTTAAAATCACGCTCATTACCCTGGCGATGGGTTATTATGCCGCCAGC
TTTACCCCCAATATCTGGTCGATTATCCAGTCGAACGTTAAACCCCATGCGATTGGCCCAGCCTCCGGTATTATTAATGG
CATCGGCGCCGGCGGCGGCGGTACGTTGGCAGGCCTTATGGTCGGCTATTTTTACCGGACAACCGGCAGCTACATGCAGG
GATTTATGGTTCTCGGATGCATTGTTATCCTGGGCGGCGCGTCATTATTGATCTACGGCAGAATAAGAGCTCACCATGCC
CGGCGCTAG

Upstream 100 bases:

>100_bases
TCACGGGGACGCATGTGCTGGTACCACAAATGACCATAAAATCCGGTGAGATATTATTTCGTCAAATTGATTTTGGCGCG
CGGCCAAACGGAGTTGAAAA

Downstream 100 bases:

>100_bases
CGCCATCAGCCAGAATGTAAAAAACAACGCCACCCGAGGGTGGCGTGTTCAGTTCAGGGCTGGTTTCTGTCTAACCAGTC
ACCGCTTTCAATCAGAGTTA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTSMQKWLRIGATLMFGLFVAYLDRSNLSVTLPTITHDLNIDGATASIVLTIFLIGYAFSNIFGGVFTQRYDPKKIVILM
VLIWSIATVFVGFTSSVYVILICRLVLGITEGIYWPQQSRFASDWFSDKERTQANSIIQYYGQFLALGLGFMILSPLDAA
FGWRNVFIITGVIGIVVVVPLYITMLKKQEEAPYYRAPAPTEKTKLTLESLGGTPFLLLIFTYITQGMLFWGITLWIPMV
VNSLGYTGFSKALVSSLPYLTAVILAIPISWISDKTQKRVLIASLGLLIPGVMLFLLPFVDAPGFKITLITLAMGYYAAS
FTPNIWSIIQSNVKPHAIGPASGIINGIGAGGGGTLAGLMVGYFYRTTGSYMQGFMVLGCIVILGGASLLIYGRIRAHHA
RR

Sequences:

>Translated_402_residues
MTSMQKWLRIGATLMFGLFVAYLDRSNLSVTLPTITHDLNIDGATASIVLTIFLIGYAFSNIFGGVFTQRYDPKKIVILM
VLIWSIATVFVGFTSSVYVILICRLVLGITEGIYWPQQSRFASDWFSDKERTQANSIIQYYGQFLALGLGFMILSPLDAA
FGWRNVFIITGVIGIVVVVPLYITMLKKQEEAPYYRAPAPTEKTKLTLESLGGTPFLLLIFTYITQGMLFWGITLWIPMV
VNSLGYTGFSKALVSSLPYLTAVILAIPISWISDKTQKRVLIASLGLLIPGVMLFLLPFVDAPGFKITLITLAMGYYAAS
FTPNIWSIIQSNVKPHAIGPASGIINGIGAGGGGTLAGLMVGYFYRTTGSYMQGFMVLGCIVILGGASLLIYGRIRAHHA
RR
>Mature_401_residues
TSMQKWLRIGATLMFGLFVAYLDRSNLSVTLPTITHDLNIDGATASIVLTIFLIGYAFSNIFGGVFTQRYDPKKIVILMV
LIWSIATVFVGFTSSVYVILICRLVLGITEGIYWPQQSRFASDWFSDKERTQANSIIQYYGQFLALGLGFMILSPLDAAF
GWRNVFIITGVIGIVVVVPLYITMLKKQEEAPYYRAPAPTEKTKLTLESLGGTPFLLLIFTYITQGMLFWGITLWIPMVV
NSLGYTGFSKALVSSLPYLTAVILAIPISWISDKTQKRVLIASLGLLIPGVMLFLLPFVDAPGFKITLITLAMGYYAASF
TPNIWSIIQSNVKPHAIGPASGIINGIGAGGGGTLAGLMVGYFYRTTGSYMQGFMVLGCIVILGGASLLIYGRIRAHHAR
R

Specific function: Intake of galactonate into the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI154350196, Length=393, Percent_Identity=20.6106870229008, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI256219598, Length=415, Percent_Identity=21.2048192771084, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI4503847, Length=415, Percent_Identity=21.2048192771084, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI256219483, Length=415, Percent_Identity=21.2048192771084, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI87082320, Length=408, Percent_Identity=25, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789515, Length=423, Percent_Identity=22.4586288416076, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI87082071, Length=364, Percent_Identity=25.5494505494505, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI2367379, Length=428, Percent_Identity=22.196261682243, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1789152, Length=406, Percent_Identity=23.1527093596059, Blast_Score=79, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24655271, Length=435, Percent_Identity=25.2873563218391, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI20130135, Length=435, Percent_Identity=25.2873563218391, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI45550460, Length=316, Percent_Identity=25.9493670886076, Blast_Score=82, Evalue=9e-16,
Organism=Drosophila melanogaster, GI28573708, Length=386, Percent_Identity=23.8341968911917, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573707, Length=386, Percent_Identity=23.8341968911917, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24655255, Length=297, Percent_Identity=24.5791245791246, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR000849
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44074; Mature: 43943

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHCCCC
>Mature Secondary Structure 
TSMQKWLRIGATLMFGLFVAYLDRSNLSVTLPTITHDLNIDGATASIVLTIFLIGYAFS
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCCCCHHHHHHHHHHHHHHHHH
NIFGGVFTQRYDPKKIVILMVLIWSIATVFVGFTSSVYVILICRLVLGITEGIYWPQQSR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FASDWFSDKERTQANSIIQYYGQFLALGLGFMILSPLDAAFGWRNVFIITGVIGIVVVVP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LYITMLKKQEEAPYYRAPAPTEKTKLTLESLGGTPFLLLIFTYITQGMLFWGITLWIPMV
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VNSLGYTGFSKALVSSLPYLTAVILAIPISWISDKTQKRVLIASLGLLIPGVMLFLLPFV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
DAPGFKITLITLAMGYYAASFTPNIWSIIQSNVKPHAIGPASGIINGIGAGGGGTLAGLM
CCCCCEEHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHH
VGYFYRTTGSYMQGFMVLGCIVILGGASLLIYGRIRAHHARR
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]