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The map label for this gene is ybbI [C]

Identifier: 16767570

GI number: 16767570

Start: 4565999

End: 4566331

Strand: Direct

Name: ybbI [C]

Synonym: STM4320

Alternate gene names: 16767570

Gene position: 4565999-4566331 (Clockwise)

Preceding gene: 16767568

Following gene: 161353575

Centisome position: 94.0

GC content: 47.75

Gene sequence:

>333_bases
ATGCAGATTGGAAAACTGGCGGCATTGACTGGCGTTAGCATACGGATGCTTCGGTACTACGAGAGCGCAGGTTTGCTTCA
TCCTTCGCGAACCGATACGGGCTATCGCAGTTTCTCGTCAGAAGATGTGGATATTGTCAGACGGATACTTATTCTAAATG
GTGCAGGTTTCACGTTACCGGTTGTGTGTAGTTTGCTGAACTGCGTACATGCAGGAACCTCACCTTGCGAGGAACTAAAA
GCTAAAGTGCGAGAACAACTGGCACAGATAGACCGTCAGTTTGACGCGCTCTCGGAAAGCCGCAATCTTCTCAATAAGTT
TCTTAATGACTAG

Upstream 100 bases:

>100_bases
CTTTTGACGCACATGACTAGTTTTAACATGTTGCTACTCCTGTCATTTCGGGAGTTCAAAGCTTACACTCTGACAGCGGT
GTCAGAGTCAAGAGGACGTT

Downstream 100 bases:

>100_bases
CCCCTGACAATTTACCTTCTAACACCATGTGGGAAATGGATTCTACTCCTCCGATTGAACATTGTTCAAATTCACATTTG
ATATTGACCCTGGCCCAAAG

Product: regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Cu(I)-Responsive Transcriptional Regulator; Zn(II)-Responsive Transcriptional Regulator; MerR Family Transcription Regulator; MerR-Family Transcriptional Regulator; Regulatory Protein MerR; MerR Family Regulator; MerR Family Regulatory Protein; Regulatory Protein

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MQIGKLAALTGVSIRMLRYYESAGLLHPSRTDTGYRSFSSEDVDIVRRILILNGAGFTLPVVCSLLNCVHAGTSPCEELK
AKVREQLAQIDRQFDALSESRNLLNKFLND

Sequences:

>Translated_110_residues
MQIGKLAALTGVSIRMLRYYESAGLLHPSRTDTGYRSFSSEDVDIVRRILILNGAGFTLPVVCSLLNCVHAGTSPCEELK
AKVREQLAQIDRQFDALSESRNLLNKFLND
>Mature_110_residues
MQIGKLAALTGVSIRMLRYYESAGLLHPSRTDTGYRSFSSEDVDIVRRILILNGAGFTLPVVCSLLNCVHAGTSPCEELK
AKVREQLAQIDRQFDALSESRNLLNKFLND

Specific function: Copper responsive transcription regulator [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12228; Mature: 12228

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIGKLAALTGVSIRMLRYYESAGLLHPSRTDTGYRSFSSEDVDIVRRILILNGAGFTLP
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCHHH
VVCSLLNCVHAGTSPCEELKAKVREQLAQIDRQFDALSESRNLLNKFLND
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQIGKLAALTGVSIRMLRYYESAGLLHPSRTDTGYRSFSSEDVDIVRRILILNGAGFTLP
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCHHH
VVCSLLNCVHAGTSPCEELKAKVREQLAQIDRQFDALSESRNLLNKFLND
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA