Click here to switch to the map view.

The map label for this gene is lpxO

Identifier: 16767536

GI number: 16767536

Start: 4527852

End: 4528760

Strand: Reverse

Name: lpxO

Synonym: STM4286

Alternate gene names: NA

Gene position: 4528760-4527852 (Counterclockwise)

Preceding gene: 39546395

Following gene: 16767535

Centisome position: 93.23

GC content: 50.5

Gene sequence:

>909_bases
ATGTTCGCAGCAATCATTATCGGTATTTTTATTATCAGCGTCATTTATGCGCATTCACGCGGGGTGGAAAAACAAAAACT
TTCCCGTCAGCTCTTTGACCACTCGACGTTTATGGCGCCGATCAATATGTTCATGACTCGCTTCTCAACGTTACCGGCAA
AGCAGCCGTACTTTGATACCACGGCATTTCCAGAGCTGCAGAAGCTGACGGAAAACTGGCAGGTGATTCGTGAAGAGGCA
CTACAGCTTCAGCATCACATAAAAGCCGCGCAGGCCAATAACGACGCCGGATTCAATACCTTTTTCAAGCGCGGCTGGAA
ACGGTTTTACCTTAAATGGTATTCCGATGCCCACCCGTCGGCGGAAACGTTATGCCCGATAACGACAAAGCTGGTCAACA
GCATCCCCTCTATTAAAGCGGCGATGTTCGCCGAGTTGCCTCCCGGGGCCTATCTGGGAAAACATCGCGACCCCTATGCC
GGTTCAGTACGTTACCATCTTGGATTAAGCACACCGAATGACGACCGCTGTTTTATTGAAGTTGATCGACAGCGCCATAG
CTGGCGCGACGGCAAAGCCGTCATCTTCGACGAAACCTACGTTCATTGGGCGGAAAATAAAACTGAGCAGACGCGTATTA
TCCTCTTTTGCGATATTGAGCGCCCAATGAAATGGCGCTGGGCGCAGAGCGTAAACCACTGGGTCGGCGCATCGTTGATG
TCCGCCGCCAGTTCGCCAAACGACGAGAACGATCGCACCGGTGCGATTAATCGCATCTTTAAATACGTTCACGCAGCACG
CGATGCCGGGCAACGTCTGAAAAAGAAAAACCGCACTCTCTATTACGCGCTGAAATATCTCGTTATTGCTGCTATTTTTG
CCGCGATAATCCTTTTCAGCCTCCTCTGA

Upstream 100 bases:

>100_bases
GTAAATTTATTGTCAACGAACTACACTTTTCTCTTTGGCATCACCGGGAGGGTTGCCTGAAAATCCCGGGATGAGGTTTT
CTTAGAAGGACAGTGACGTT

Downstream 100 bases:

>100_bases
AGCCGGGCCGCGGTATGGAACTGCCTGCCGCGGCCTGTTCTATCCTGGCGTTAGTCTCAAAGCGTTCCCTGGCCTTGAGT
CTATCCATCCGGATAATTTC

Product: dioxygenase

Products: NA

Alternate protein names: Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Aspartyl-Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Peptide-Aspartate Beta-Dioxygenase; Hydroxylase; Lipid A-Myristate Beta-Hydroxylase; Peptide-Aspartate B-Dioxygenase; Aspartate Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Lipopolysaccharide Biosynthetic Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Peptide Aspartate B-Dioxygenase; Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Protein; Aspartyl/Asparaginyl-Beta-Hydroxylase

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MFAAIIIGIFIISVIYAHSRGVEKQKLSRQLFDHSTFMAPINMFMTRFSTLPAKQPYFDTTAFPELQKLTENWQVIREEA
LQLQHHIKAAQANNDAGFNTFFKRGWKRFYLKWYSDAHPSAETLCPITTKLVNSIPSIKAAMFAELPPGAYLGKHRDPYA
GSVRYHLGLSTPNDDRCFIEVDRQRHSWRDGKAVIFDETYVHWAENKTEQTRIILFCDIERPMKWRWAQSVNHWVGASLM
SAASSPNDENDRTGAINRIFKYVHAARDAGQRLKKKNRTLYYALKYLVIAAIFAAIILFSLL

Sequences:

>Translated_302_residues
MFAAIIIGIFIISVIYAHSRGVEKQKLSRQLFDHSTFMAPINMFMTRFSTLPAKQPYFDTTAFPELQKLTENWQVIREEA
LQLQHHIKAAQANNDAGFNTFFKRGWKRFYLKWYSDAHPSAETLCPITTKLVNSIPSIKAAMFAELPPGAYLGKHRDPYA
GSVRYHLGLSTPNDDRCFIEVDRQRHSWRDGKAVIFDETYVHWAENKTEQTRIILFCDIERPMKWRWAQSVNHWVGASLM
SAASSPNDENDRTGAINRIFKYVHAARDAGQRLKKKNRTLYYALKYLVIAAIFAAIILFSLL
>Mature_302_residues
MFAAIIIGIFIISVIYAHSRGVEKQKLSRQLFDHSTFMAPINMFMTRFSTLPAKQPYFDTTAFPELQKLTENWQVIREEA
LQLQHHIKAAQANNDAGFNTFFKRGWKRFYLKWYSDAHPSAETLCPITTKLVNSIPSIKAAMFAELPPGAYLGKHRDPYA
GSVRYHLGLSTPNDDRCFIEVDRQRHSWRDGKAVIFDETYVHWAENKTEQTRIILFCDIERPMKWRWAQSVNHWVGASLM
SAASSPNDENDRTGAINRIFKYVHAARDAGQRLKKKNRTLYYALKYLVIAAIFAAIILFSLL

Specific function: Unknown

COG id: COG3555

COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34854; Mature: 34854

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAAIIIGIFIISVIYAHSRGVEKQKLSRQLFDHSTFMAPINMFMTRFSTLPAKQPYFDT
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TAFPELQKLTENWQVIREEALQLQHHIKAAQANNDAGFNTFFKRGWKRFYLKWYSDAHPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
AETLCPITTKLVNSIPSIKAAMFAELPPGAYLGKHRDPYAGSVRYHLGLSTPNDDRCFIE
CHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEE
VDRQRHSWRDGKAVIFDETYVHWAENKTEQTRIILFCDIERPMKWRWAQSVNHWVGASLM
ECCHHCCCCCCCEEEEECCEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
SAASSPNDENDRTGAINRIFKYVHAARDAGQRLKKKNRTLYYALKYLVIAAIFAAIILFS
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LL
HC
>Mature Secondary Structure
MFAAIIIGIFIISVIYAHSRGVEKQKLSRQLFDHSTFMAPINMFMTRFSTLPAKQPYFDT
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TAFPELQKLTENWQVIREEALQLQHHIKAAQANNDAGFNTFFKRGWKRFYLKWYSDAHPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
AETLCPITTKLVNSIPSIKAAMFAELPPGAYLGKHRDPYAGSVRYHLGLSTPNDDRCFIE
CHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEE
VDRQRHSWRDGKAVIFDETYVHWAENKTEQTRIILFCDIERPMKWRWAQSVNHWVGASLM
ECCHHCCCCCCCEEEEECCEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
SAASSPNDENDRTGAINRIFKYVHAARDAGQRLKKKNRTLYYALKYLVIAAIFAAIILFS
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LL
HC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA