| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16767457
Identifier: 16767457
GI number: 16767457
Start: 4427609
End: 4428331
Strand: Reverse
Name: 16767457
Synonym: STM4207
Alternate gene names: NA
Gene position: 4428331-4427609 (Counterclockwise)
Preceding gene: 16767458
Following gene: 16767456
Centisome position: 91.17
GC content: 58.09
Gene sequence:
>723_bases ATGAAAGGCGTTACCCGCCAGACGGGTATTATCAGCGATATTGATGAGGCGGTCGTGCGCGTCAGAGTCACTCTACCGGA GTGCGATAACCTGCGCAGTAACTGGCTTGCGGTGCTGCAACGCAACACGCAGGACAACAAAGATTACTGGTTGCCGGATA TTGGCGAACAGGTGGAAGTTTCGCTCGACGACAACGGCGAGGATGGGGTGGTGCTGGGCGCGGTCTACTCCAGCGTGGAT ACCGCGCCGCTGGCCTCGCGCGACAAGCGCTACGTGCAGTTTTCCGACGGCGCGGCCTTTGAATATGACCGTGCGTTACA CCAGCTCACCGTCAACGGCGGCATAGAAAAAATCGTCATTGAAGTGAAGGAACATACGCAGCTTACTTCACCGCAAGTAG AGGTCAGGGCGCAGCACGTCACGGTGATATCAGAAACCGTAGACGTGGCGGCCACCTCCGTGGGCGTCAAGGCGGTAGAT GTCAACGTGGAAGCGCCCCATACGGGCATTAAAGCGCTGAATGTCACCGTCGATGCGCCGCTCAGCACCTTTACCGGCGA CGTTACCGTGATGAAAAAACTCACCTGGCTTGGCGGTATGGCAGGCAGCGGCGGCGTCGGAAACAGCGCGGTGATTACGG GCAACGTGAATGTCCTCGGCAACGTTAACGCCAGCGGCACGCTGATGGACAACGGCGGCAACTCTAACCACCACTCTCAC TAA
Upstream 100 bases:
>100_bases GCTGATTGATAAATCCATGCACAAACTCACGCGCAGCGGCGGCTACACTACCGAAATCGACATTTCACGCGGACCGGCAA CCAGCCAGTAAGGAGGCAAT
Downstream 100 bases:
>100_bases CCTGCAAATTGCTGCTGGATGGTGGCTTCGCCTTATCCAGCCTGCAAAAGGTGCATAAACACCGGCCCGGTAAGCGCAGA AGCGCCACCGGGCAAATTGC
Product: phage baseplate component
Products: NA
Alternate protein names: Phage Baseplate Component; Bacteriophage Baseplate Protein; Phage Baseplate Assembly Protein GpV; Bacteriophage Baseplate Assembly; Phage Tail Spike Protein; Prophage; Phage Baseplate Protein; Baseplate Assembly Protein V; Phage-Related Baseplate Assembly Protein
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVD TAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVD VNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
Sequences:
>Translated_240_residues MKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVD TAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVD VNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH >Mature_240_residues MKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVD TAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVD VNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25531; Mature: 25531
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEV CCCCCCCCCCHHHHCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE SLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVI EECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHEEEECCCEEEEEE EVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPHTGIKALNVTVDAP EEECCCCCCCCCEEEEEEEEEEEHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEEECCC LSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH HHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECEEEEEECCCCCEEEECCCCCCCCCC >Mature Secondary Structure MKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEV CCCCCCCCCCHHHHCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE SLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVI EECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHEEEECCCEEEEEE EVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPHTGIKALNVTVDAP EEECCCCCCCCCEEEEEEEEEEEHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEEECCC LSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH HHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECEEEEEECCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA