| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16767446
Identifier: 16767446
GI number: 16767446
Start: 4417918
End: 4418646
Strand: Reverse
Name: 16767446
Synonym: STM4196
Alternate gene names: NA
Gene position: 4418646-4417918 (Counterclockwise)
Preceding gene: 16767447
Following gene: 16767445
Centisome position: 90.97
GC content: 38.41
Gene sequence:
>729_bases ATGATTATTGTTTCTGTGCTCAGACAAAGCAAAGACTTCACCACAAAACATGCTCAATGGTTACATAAGCAGCTCAAAGG TTATGATTCTGTTTGTTTAACAGATGCGCTAAAGATAAAAGGGGTAAATACAGCGCCTCTTTTGTATGATTGGCCAGGAT GGTGGGCAAAACTAGAACTTTTCAATCCACTGCATCCTGTTCTTGGTAATGAGGATATTCTCTATATTGATATAGATAGC GTTATTGTGGGAGATATTACTCCTCTGACAACTATGAAAAAAATAACATTACTTAATGACTTTTCTCAGCATGGTGCTTC AGTTGCGCCAGCAACAGGTATTATGTTTATTCCTGCACCCGCAAAAAAAAATGTGTGGGATGAATTTATGAAAAATCCTG AAAAGGAAATCAATGCCATAAGAACCCCACCCTATCATGGCGATCAAGGATTTATCGGCAGAATATGTCAAGATGCTGAA AGATGGCAAAACATCTTACCCGGAAGAATTATTAGTTACAAAGCTAATATAGCAACACCAAAAATGATTGGTTTTAACCC TGAACTATACGATGGGACAGGTAATGGAAAATTACCTGACGGAGCAAGCATAGTCTGTTTTCATGGTTCCCCTCGCCCCT GGAACACAGCATTGCCCTGGGTGCCTTACTTTAGTTTAAAAAACACAATCCAAAGCAAAGTGAAACAATATAAGTTATCA CTGCGTTAA
Upstream 100 bases:
>100_bases AACTTCGATAACCATATGAACACTAATTTTGTTGCAATATAAAGCACATTAAATATAGTGGAACATGGCTAAAATCACCT AATATTCACCGGGGAATATA
Downstream 100 bases:
>100_bases AGCTTCCTTCTCTTCAATGCCGGCGCTTTTCTTTACGCCACCAGAACCTCTATATATTTCTAATACGGTAGCGTAAGCGC CATCGGGCGATACGTTGCCG
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDS VIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAE RWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLS LR
Sequences:
>Translated_242_residues MIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDS VIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAE RWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLS LR >Mature_242_residues MIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDS VIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAE RWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLS LR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27245; Mature: 27245
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLEL CEEEEEHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHEEECCCCCCCEEEECCCCEEEEEE FNPLHPVLGNEDILYIDIDSVIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAP CCCCCHHCCCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC AKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATP CCCHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCC KMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLS EEECCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC LR CC >Mature Secondary Structure MIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLEL CEEEEEHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHEEECCCCCCCEEEECCCCEEEEEE FNPLHPVLGNEDILYIDIDSVIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAP CCCCCHHCCCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC AKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATP CCCHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCC KMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLS EEECCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC LR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA