| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is frwD [H]
Identifier: 16767381
GI number: 16767381
Start: 4331957
End: 4332310
Strand: Direct
Name: frwD [H]
Synonym: STM4116
Alternate gene names: 16767381
Gene position: 4331957-4332310 (Clockwise)
Preceding gene: 16767380
Following gene: 16767386
Centisome position: 89.18
GC content: 56.5
Gene sequence:
>354_bases ATGGCAGTACCTGTACGGCATCTGGTGGCAGTGACCGCCTGCGTGAGCGGTGTAGCGCATACCTATATGGCTGCTGAACG GCTGGAAAAACTTTGCCAGCAGGAGAAGTGGAGCATCAAGATTGAAACCCAGGGGGCACTCGGTACAGAGAACCGCTTAA CGGAAGAGGATATCCGCCGTGCCGATGTCGTGTTGCTCATTACCGATATCGAGCTGGCGGGCGTGGAGCGATTTACCCGG AGTCGCTATGTCCAGTCGGGGATCAGCGCTTTTTTGCGGGAGCCACAGCGGGTAATGAGCGCTGTGCGTAAACTCCTTTC CGCGCCGCAACATACCCACCTTATCCTGGAGTAA
Upstream 100 bases:
>100_bases TGGATGATGAAAGATATTCCCGCGCCGTCGGTGCAAGAGATCGCTCTGTTTCGGGAGATGGCGGAGCAAGCAGGATTTCA GGTCACCACAGGAGGTTAAT
Downstream 100 bases:
>100_bases TCTGCTTTTCCGTTAGCTGGCTGTGATACTGGCGGCGATACTCCGACGGCGAGCGTTCCGTATTTTTGCGAAACAGGCGG CAGAAATAGTTACTGTCGAC
Product: fructose-like phosphotransferase EIIB subunit 3
Products: NA
Alternate protein names: PTS system fructose-like EIIB component 3 [H]
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MAVPVRHLVAVTACVSGVAHTYMAAERLEKLCQQEKWSIKIETQGALGTENRLTEEDIRRADVVLLITDIELAGVERFTR SRYVQSGISAFLREPQRVMSAVRKLLSAPQHTHLILE
Sequences:
>Translated_117_residues MAVPVRHLVAVTACVSGVAHTYMAAERLEKLCQQEKWSIKIETQGALGTENRLTEEDIRRADVVLLITDIELAGVERFTR SRYVQSGISAFLREPQRVMSAVRKLLSAPQHTHLILE >Mature_116_residues AVPVRHLVAVTACVSGVAHTYMAAERLEKLCQQEKWSIKIETQGALGTENRLTEEDIRRADVVLLITDIELAGVERFTRS RYVQSGISAFLREPQRVMSAVRKLLSAPQHTHLILE
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane [H]
COG id: COG1445
COG function: function code G; Phosphotransferase system fructose-specific component IIB
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790390, Length=111, Percent_Identity=83.7837837837838, Blast_Score=190, Evalue=2e-50, Organism=Escherichia coli, GI1790387, Length=100, Percent_Identity=46, Blast_Score=95, Evalue=1e-21, Organism=Escherichia coli, GI87082348, Length=95, Percent_Identity=42.1052631578947, Blast_Score=75, Evalue=1e-15, Organism=Escherichia coli, GI1788492, Length=97, Percent_Identity=38.1443298969072, Blast_Score=72, Evalue=8e-15, Organism=Escherichia coli, GI1788730, Length=106, Percent_Identity=30.188679245283, Blast_Score=65, Evalue=9e-13, Organism=Escherichia coli, GI1786951, Length=71, Percent_Identity=42.2535211267606, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003353 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 13153; Mature: 13022
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPVRHLVAVTACVSGVAHTYMAAERLEKLCQQEKWSIKIETQGALGTENRLTEEDIRR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHH ADVVLLITDIELAGVERFTRSRYVQSGISAFLREPQRVMSAVRKLLSAPQHTHLILE HCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEECC >Mature Secondary Structure AVPVRHLVAVTACVSGVAHTYMAAERLEKLCQQEKWSIKIETQGALGTENRLTEEDIRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHH ADVVLLITDIELAGVERFTRSRYVQSGISAFLREPQRVMSAVRKLLSAPQHTHLILE HCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7773398 [H]