| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yegU [H]
Identifier: 16767333
GI number: 16767333
Start: 4277918
End: 4278958
Strand: Direct
Name: yegU [H]
Synonym: STM4067
Alternate gene names: 16767333
Gene position: 4277918-4278958 (Clockwise)
Preceding gene: 16767332
Following gene: 16767334
Centisome position: 88.07
GC content: 57.06
Gene sequence:
>1041_bases ATGCACGTTGATCGAAACAAAATACTGGGATGCCTGGTGGGCGCCGCCGCCGCGGACGCGATGGGAGCCGCGACGGAAGT ACGCACCCAGCAGCAAATAAAAGACTATTTTGGCGGCTGGGTGACGACCTTTCAAAAACCGCCAGCGGACACGTTTGGCC GCTGCAACGAAGCGGGGATGTGCACGGATGATTTTATTCAGGCGAAGTACATCATGGATGCGCTGCTGCGCCATCAACGC CAGGTCAGCGACGAGGCGATGCGCGAGGCTTTCCAGCAGTGGCTGGATTACCCGTACTACGCCAACTTTACCGGCCCGAC GACGCGTGCGGCAATGAAGGCAATATTCAATGATAACCGCGCCTCTTTACAGGGTGAGCTGGAAGGCGAGAAACAGTCGG TACAGATTATTAATAAGGGTAACGCGGAGGCAACGAACGGCGCCGCCATGAAGATTTGGCCAGCGGCGGTGCTGCACCCG GGTGATATTGACGCGGCGATTGAATGCGCGCTACAGATTTGCCGCTTTACCCATAATAACGTGCTGGCGATGTCCGGCGC AGCGGCGATGGCGGCGGCAACCAGCGAGGCGTTAAGAGCGCAGACCAATGCAGACAGCATTATTGCCGCCGGTATTTACG GTGCGCAAAGGGGCTATCTGCTGGCGCAGGAGCAAGGGGCGATGATGGTCGCCGGGCCTTCCGTTGCCCGACGCATTGAG CTGGCCGTAGATATCGGTAAACGTCATCGCCATTGGGAAACGGCGGTGGTGGAACTTGCTGATATTATTGGCTCCGGGCT GCACGTGAGTGAAGCGGTGCCGGCGGCCTTTGGCCTGTTCGCGTGTTGTCCGAATTCTGCCGTAGATGCTATTATCTCCG GCGTTAATATCGGCAATGATACTGATACTGTCGCCACCATGGTCGGGGCGATTTCCGGCGCATTCCATGGCGTGGAGGCT TTTCCCGCCGATTATTTAACGACTTTGGATCGTATGAATCATTTCGATTTGGCAGAACTGGCCAGGCAAATCGCAGGGTA G
Upstream 100 bases:
>100_bases AAAAGGCGCAATGACCGCTTTACCGTTTCCTGACCAACTCAACACTTTTCTTTCCAGCCATTCGCTGGCACAAGCCATGA CCGTGAAATAAGGAGTCATC
Downstream 100 bases:
>100_bases CGACTTCACCCTGCCGGGGACGGTAAAACGTCCCCTGCTGGCGAAGACGTGAGGTGCGCAGCTTGCAGGTTGATAAAACG AGCTTTACTCCGCTTTATAA
Product: ADP-ribosylglycohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MHVDRNKILGCLVGAAAADAMGAATEVRTQQQIKDYFGGWVTTFQKPPADTFGRCNEAGMCTDDFIQAKYIMDALLRHQR QVSDEAMREAFQQWLDYPYYANFTGPTTRAAMKAIFNDNRASLQGELEGEKQSVQIINKGNAEATNGAAMKIWPAAVLHP GDIDAAIECALQICRFTHNNVLAMSGAAAMAAATSEALRAQTNADSIIAAGIYGAQRGYLLAQEQGAMMVAGPSVARRIE LAVDIGKRHRHWETAVVELADIIGSGLHVSEAVPAAFGLFACCPNSAVDAIISGVNIGNDTDTVATMVGAISGAFHGVEA FPADYLTTLDRMNHFDLAELARQIAG
Sequences:
>Translated_346_residues MHVDRNKILGCLVGAAAADAMGAATEVRTQQQIKDYFGGWVTTFQKPPADTFGRCNEAGMCTDDFIQAKYIMDALLRHQR QVSDEAMREAFQQWLDYPYYANFTGPTTRAAMKAIFNDNRASLQGELEGEKQSVQIINKGNAEATNGAAMKIWPAAVLHP GDIDAAIECALQICRFTHNNVLAMSGAAAMAAATSEALRAQTNADSIIAAGIYGAQRGYLLAQEQGAMMVAGPSVARRIE LAVDIGKRHRHWETAVVELADIIGSGLHVSEAVPAAFGLFACCPNSAVDAIISGVNIGNDTDTVATMVGAISGAFHGVEA FPADYLTTLDRMNHFDLAELARQIAG >Mature_346_residues MHVDRNKILGCLVGAAAADAMGAATEVRTQQQIKDYFGGWVTTFQKPPADTFGRCNEAGMCTDDFIQAKYIMDALLRHQR QVSDEAMREAFQQWLDYPYYANFTGPTTRAAMKAIFNDNRASLQGELEGEKQSVQIINKGNAEATNGAAMKIWPAAVLHP GDIDAAIECALQICRFTHNNVLAMSGAAAMAAATSEALRAQTNADSIIAAGIYGAQRGYLLAQEQGAMMVAGPSVARRIE LAVDIGKRHRHWETAVVELADIIGSGLHVSEAVPAAFGLFACCPNSAVDAIISGVNIGNDTDTVATMVGAISGAFHGVEA FPADYLTTLDRMNHFDLAELARQIAG
Specific function: Unknown
COG id: COG1397
COG function: function code O; ADP-ribosylglycohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP-ribosylglycohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI8923417, Length=350, Percent_Identity=24.8571428571429, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1788416, Length=344, Percent_Identity=29.3604651162791, Blast_Score=123, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005502 [H]
Pfam domain/function: PF03747 ADP_ribosyl_GH [H]
EC number: NA
Molecular weight: Translated: 36971; Mature: 36971
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVDRNKILGCLVGAAAADAMGAATEVRTQQQIKDYFGGWVTTFQKPPADTFGRCNEAGM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHCCCCCCC CTDDFIQAKYIMDALLRHQRQVSDEAMREAFQQWLDYPYYANFTGPTTRAAMKAIFNDNR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCH ASLQGELEGEKQSVQIINKGNAEATNGAAMKIWPAAVLHPGDIDAAIECALQICRFTHNN HHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEHHHEECCCCCHHHHHHHHHHHHHCCCC VLAMSGAAAMAAATSEALRAQTNADSIIAAGIYGAQRGYLLAQEQGAMMVAGPSVARRIE EEEECCHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCEEEEECCCCEEEECHHHHHHHH LAVDIGKRHRHWETAVVELADIIGSGLHVSEAVPAAFGLFACCPNSAVDAIISGVNIGND HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC TDTVATMVGAISGAFHGVEAFPADYLTTLDRMNHFDLAELARQIAG HHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure MHVDRNKILGCLVGAAAADAMGAATEVRTQQQIKDYFGGWVTTFQKPPADTFGRCNEAGM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHCCCCCCC CTDDFIQAKYIMDALLRHQRQVSDEAMREAFQQWLDYPYYANFTGPTTRAAMKAIFNDNR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCH ASLQGELEGEKQSVQIINKGNAEATNGAAMKIWPAAVLHPGDIDAAIECALQICRFTHNN HHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEHHHEECCCCCHHHHHHHHHHHHHCCCC VLAMSGAAAMAAATSEALRAQTNADSIIAAGIYGAQRGYLLAQEQGAMMVAGPSVARRIE EEEECCHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCEEEEECCCCEEEECHHHHHHHH LAVDIGKRHRHWETAVVELADIIGSGLHVSEAVPAAFGLFACCPNSAVDAIISGVNIGND HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC TDTVATMVGAISGAFHGVEAFPADYLTTLDRMNHFDLAELARQIAG HHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]