| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is 16767323
Identifier: 16767323
GI number: 16767323
Start: 4267930
End: 4268325
Strand: Direct
Name: 16767323
Synonym: STM4057
Alternate gene names: NA
Gene position: 4267930-4268325 (Clockwise)
Preceding gene: 39546389
Following gene: 16767326
Centisome position: 87.86
GC content: 54.8
Gene sequence:
>396_bases ATGACTGAAGCTGAAAATGCGGTGGCGATCGTAAAAGAATTTTTGGTGGCCTCGATGATTCCCGATGCTGAACGCGCCGC AACGTATATGCACCCGGAGGTGAAAATTACCTTCACCGGAGGCCGGGCAATGGCTGGCGCGGCAGATATCGCGCAGTTTA ACGGCGCTCGCTACAAGTGGGTGAAGAAGGCGCTGGGCGAGTTTGATGCGGTGCAGCATGATCATTACGTTGTGATTTAT TCCAACGGTACGCTGTATGGGGAATGGCCCGACGGTCGCCCGTTTGCCGGTAATCGCTTTATCGATCGTTTCGAAGTGCG CGATGGCAAAATTACCCGGATGGACGTGTGGAACGACAGCGCCGAGTGGATTCTGGTGCCGGAAATCTCCCGGTAA
Upstream 100 bases:
>100_bases GGAGCCGCACCATGCAGAAGCGTCGTTTGAGCGGCAAAATTGAAGATAGCGCCAGACGACTGTGGGGGGATAAAACTCCG CCAAAATGAAAGGAAGGATT
Downstream 100 bases:
>100_bases ATCTCGACGGCGAGATAAAAAATCGGCCTGCATTCGCAGGCCGATGGTTTTTAGGTTCGCTTGTACAGCGGTAGCCACAG CGTAAGCCGCAACCCACCCA
Product: inner membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTEAENAVAIVKEFLVASMIPDAERAATYMHPEVKITFTGGRAMAGAADIAQFNGARYKWVKKALGEFDAVQHDHYVVIY SNGTLYGEWPDGRPFAGNRFIDRFEVRDGKITRMDVWNDSAEWILVPEISR
Sequences:
>Translated_131_residues MTEAENAVAIVKEFLVASMIPDAERAATYMHPEVKITFTGGRAMAGAADIAQFNGARYKWVKKALGEFDAVQHDHYVVIY SNGTLYGEWPDGRPFAGNRFIDRFEVRDGKITRMDVWNDSAEWILVPEISR >Mature_130_residues TEAENAVAIVKEFLVASMIPDAERAATYMHPEVKITFTGGRAMAGAADIAQFNGARYKWVKKALGEFDAVQHDHYVVIYS NGTLYGEWPDGRPFAGNRFIDRFEVRDGKITRMDVWNDSAEWILVPEISR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14786; Mature: 14655
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAENAVAIVKEFLVASMIPDAERAATYMHPEVKITFTGGRAMAGAADIAQFNGARYKW CCCCHHHHHHHHHHHHHHCCCCCHHHHEEECCEEEEEEECCCCCCCCHHHHHCCCCHHHH VKKALGEFDAVQHDHYVVIYSNGTLYGEWPDGRPFAGNRFIDRFEVRDGKITRMDVWNDS HHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEECCCC AEWILVPEISR CCEEEEECCCC >Mature Secondary Structure TEAENAVAIVKEFLVASMIPDAERAATYMHPEVKITFTGGRAMAGAADIAQFNGARYKW CCCHHHHHHHHHHHHHHCCCCCHHHHEEECCEEEEEEECCCCCCCCHHHHHCCCCHHHH VKKALGEFDAVQHDHYVVIYSNGTLYGEWPDGRPFAGNRFIDRFEVRDGKITRMDVWNDS HHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEECCCC AEWILVPEISR CCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA