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The map label for this gene is hemG

Identifier: 16767257

GI number: 16767257

Start: 4195136

End: 4195681

Strand: Direct

Name: hemG

Synonym: STM3987

Alternate gene names: 16767257

Gene position: 4195136-4195681 (Clockwise)

Preceding gene: 16767256

Following gene: 16767260

Centisome position: 86.37

GC content: 50.37

Gene sequence:

>546_bases
GTGAAAACATTGATTCTTTTCTCTACCCGGGACGGACAAACGCGCGAAATTGCCTCTTATCTGGCTTCTGAACTCAAAGA
TATGGGGATCTGGGCCGATGTCGTTAATCTGCATCGCGCAGAAGAGCCTGACTGGGATAGCTATGATCGCGTAGTGATTG
GCGCGTCTATTCGTTATGGTCATTACCACAGCGCCTTTCAGGAGTTTGTTAAGAAATATGCCACGCGGTTGAACGGAATG
CCGAGCGCCTTTTATTCCGTTAACCTGGTGGCGCGTAAAGCTGAAAAACGGACGCCGCAGACTAACAGCTACGCGCGGAA
GTTTTTAATGAGCTCTCCGTGGCGACCTGACTACTGTGCCGTCATTGCAGGCGCGCTTCGCTATCCCCGTTATCGCTGGT
ATGACCGTCTGATGATCAAGCTTATTATGAAGATGTCGGGCGGCGAAACGGATACCAGTAAAGAAGTGGTGTACACCGAC
TGGGAGCAGGTTGCGCACTTTGCCCGTGAAATAGCCCATTTAACCAACAAATCGTCGGCAAAATAA

Upstream 100 bases:

>100_bases
AATGGATACTAATCGCCAACATGCTATTTGGTCGTTTGGAAGTATTCACTTTGCTGGTACTTTTTACCCCGACTTTCTGG
CGTGAATAATGGAGTAACAC

Downstream 100 bases:

>100_bases
ACGCAAAGAATAAAAAGTGCGCACTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCAAAAATAACTCCCTATAATGCG
CCACCACTGACACGGAACAA

Product: protoporphyrinogen oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKTLILFSTRDGQTREIASYLASELKDMGIWADVVNLHRAEEPDWDSYDRVVIGASIRYGHYHSAFQEFVKKYATRLNGM
PSAFYSVNLVARKAEKRTPQTNSYARKFLMSSPWRPDYCAVIAGALRYPRYRWYDRLMIKLIMKMSGGETDTSKEVVYTD
WEQVAHFAREIAHLTNKSSAK

Sequences:

>Translated_181_residues
MKTLILFSTRDGQTREIASYLASELKDMGIWADVVNLHRAEEPDWDSYDRVVIGASIRYGHYHSAFQEFVKKYATRLNGM
PSAFYSVNLVARKAEKRTPQTNSYARKFLMSSPWRPDYCAVIAGALRYPRYRWYDRLMIKLIMKMSGGETDTSKEVVYTD
WEQVAHFAREIAHLTNKSSAK
>Mature_181_residues
MKTLILFSTRDGQTREIASYLASELKDMGIWADVVNLHRAEEPDWDSYDRVVIGASIRYGHYHSAFQEFVKKYATRLNGM
PSAFYSVNLVARKAEKRTPQTNSYARKFLMSSPWRPDYCAVIAGALRYPRYRWYDRLMIKLIMKMSGGETDTSKEVVYTD
WEQVAHFAREIAHLTNKSSAK

Specific function: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX using menaquinone as electron acceptor

COG id: COG4635

COG function: function code CH; Flavodoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain

Homologues:

Organism=Escherichia coli, GI1790285, Length=181, Percent_Identity=87.8453038674033, Blast_Score=336, Evalue=6e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HEMG_SALTY (Q9L6L1)

Other databases:

- EMBL:   AF233324
- EMBL:   AE006468
- RefSeq:   NP_462872.1
- ProteinModelPortal:   Q9L6L1
- PRIDE:   Q9L6L1
- GeneID:   1255513
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM3987
- NMPDR:   fig|99287.1.peg.3846
- HOGENOM:   HBG540004
- OMA:   EIEYTDW
- ProtClustDB:   PRK11104
- BioCyc:   STYP99287:STM3987-MONOMER
- BRENDA:   1.3.3.4
- InterPro:   IPR008254
- InterPro:   IPR001226

Pfam domain/function: NA

EC number: =1.3.5.3

Molecular weight: Translated: 21006; Mature: 21006

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00201 FLAVODOXIN; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLILFSTRDGQTREIASYLASELKDMGIWADVVNLHRAEEPDWDSYDRVVIGASIRYG
CCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEECEECCC
HYHSAFQEFVKKYATRLNGMPSAFYSVNLVARKAEKRTPQTNSYARKFLMSSPWRPDYCA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHH
VIAGALRYPRYRWYDRLMIKLIMKMSGGETDTSKEVVYTDWEQVAHFAREIAHLTNKSSA
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCC
K
C
>Mature Secondary Structure
MKTLILFSTRDGQTREIASYLASELKDMGIWADVVNLHRAEEPDWDSYDRVVIGASIRYG
CCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEECEECCC
HYHSAFQEFVKKYATRLNGMPSAFYSVNLVARKAEKRTPQTNSYARKFLMSSPWRPDYCA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHH
VIAGALRYPRYRWYDRLMIKLIMKMSGGETDTSKEVVYTDWEQVAHFAREIAHLTNKSSA
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609