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The map label for this gene is sgrR [H]

Identifier: 16767144

GI number: 16767144

Start: 4067127

End: 4068884

Strand: Direct

Name: sgrR [H]

Synonym: STM3860

Alternate gene names: 16767144

Gene position: 4067127-4068884 (Clockwise)

Preceding gene: 16767136

Following gene: 16767161

Centisome position: 83.73

GC content: 55.92

Gene sequence:

>1758_bases
ATGACAACCCGGCACACTGAACAAAAATACTTAAAGCTACTCCAGCACTATGGCGACAAGCCTGTTAGCGTGACATTACA
GGAGCTGGCGGATGTGTTGTTCTGCACCCGACGGCATATGCGTAATCTGTTGCTTCAGATGCAGGAGGCAAAGTGGCTCA
TCTGGCAATCACAGGCCGGACGTGGGCATCGCGCCCGGCTTCACCTGCGCTATAAACCAGAACAGCTGTTAAGCGAAAAG
GCGGAGCAGTTACTGGAGTCTGGTCATATTGATCAGGCCATTCAGCTGCTGGGTAAAAATAAGCACCAGGTGGCGCAACT
GCTGCGTTCAAAGCTGGGCTATAGCGTGCGGGCAGACTATCAGCGGCTGTGCATCCCCTATTATCGGACAATGCCGTCGC
TGTGCCCCGGCATACCGTTGCGTCGCTCTGAGCAGCATCTGGTCAGGCAGATTTTTAGCGGCCTGACGCGCATAAATGAG
GAAAAAGGTGAAGTCGAAGCCGATCTTGCCCACCACTGGCGGCAGATTGATCCACTGCGCTGGCGTTTTTATCTGCGCCC
CGCCGTCCTCTGGCATGATGGTCAGGAGCTGACGATCGACGCGGTTATCGCTTCACTGACCCGCAGCGCTAAGCTGCCGT
TGTTCTCGCACTTGCAGACCATTCAGGCCACCGGGCCGCTGAGCCTTGAAATTACGCTGGCGCACCCGGATAACCGACTG
CCGCTGCTGCTCAGCCATATTGATGCCATGATCCTACCGCCTGACCATACACAACGCGCTGATTTCCCGGCACATCCTGT
GGGGACTGGCCCTTATGAGGTGGTGGAAAACAATGGCTTTCATCTACAAATGAAGGCCTTTGACCACTATTTCGGTCTGC
GCGGGCTGCTGGATGAAGTGGAGGTCTTTATCTGGCCGAATTTAACGGAGACAGACAACCTGGCGGAATCGCTGTCGGAT
AACGACACGGCAGCCTGGCTCAGCTCCAGCCTGAGCGATGAGGATTACGTTTCCGGACGGCTTAGCCAGGTATCAGGCAA
ACCTTCTGACAACCTGCGCGAGATGTTTCTTGAGCGTGGAGGATATTTTTTATTATGCGACAGCCGCTCCCCGCACTGGC
ATACCGCCGAACATCGCCGCTGGCTACGGGAAACACTCAGCCCTTACGCCATACTCCAGCATCTGAGTGAGGCAATTCGC
CCCTTCTGGGTACCGGGCGGCAGCCTGCTGTCCTCCTGGTTTCATACTATTGAGGCGGGCCCGGCCTGTTCACCTTTTAT
CTCGTCGTCGCCCTACGCAAAACTGCGTCTGGCCTATCACGATCAGCACCCTGAATTTCCAATGCTCCTGGATATCATGC
AAGAGATCATGCGCCAGCAGGGCATTTTACTTGAGGGCGTTGAGCTGAATTATGATGACTGGGCGAATGGCAAAGCCAAT
GTGGATCTCTGGCTGGGGACGGTCAATTTCCCCATTCCCGAAGAGTGGAACGTCGGTACATGGCTACTGGGCTCCCCTTT
ACTGCGCCACGCCATCAGTGGTGGGGATGATGCGCTGCTGGCCCAATGGGAAACCCAGTGGCATGCCGAAACCATCAGCG
CGGAACAACTGGTCAGGGAAACCACCCGTTCAGGCTGGCTACAGCCGCTTTTTCACCACTGGATGCGACTCAAAAGCCCC
GACCGGGCCAGGGGGATCCACCTGAATAACCTGGGGTGGTTTGATTTCCGATCCACCTGGATTGAGCCAGGGCCTTAA

Upstream 100 bases:

>100_bases
TGTCATGATGAATCCTCATAGAAGTTGCGATAGAGAAAATCATCGGCTAAAAAGGGGATATTAAAAATTGCTCATTCCCG
TTCGGGAAATTTCACCTTTT

Downstream 100 bases:

>100_bases
AGAAGAGAATGTGACCGGGTGCCCGTAGCGCAGGCAGGCGTAGCACCTCTTAGTCGCTCTTCAGCCACCATAGAGAAAGA
ACAGCGCCTGTCACAGCGCA

Product: dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 584

Protein sequence:

>585_residues
MTTRHTEQKYLKLLQHYGDKPVSVTLQELADVLFCTRRHMRNLLLQMQEAKWLIWQSQAGRGHRARLHLRYKPEQLLSEK
AEQLLESGHIDQAIQLLGKNKHQVAQLLRSKLGYSVRADYQRLCIPYYRTMPSLCPGIPLRRSEQHLVRQIFSGLTRINE
EKGEVEADLAHHWRQIDPLRWRFYLRPAVLWHDGQELTIDAVIASLTRSAKLPLFSHLQTIQATGPLSLEITLAHPDNRL
PLLLSHIDAMILPPDHTQRADFPAHPVGTGPYEVVENNGFHLQMKAFDHYFGLRGLLDEVEVFIWPNLTETDNLAESLSD
NDTAAWLSSSLSDEDYVSGRLSQVSGKPSDNLREMFLERGGYFLLCDSRSPHWHTAEHRRWLRETLSPYAILQHLSEAIR
PFWVPGGSLLSSWFHTIEAGPACSPFISSSPYAKLRLAYHDQHPEFPMLLDIMQEIMRQQGILLEGVELNYDDWANGKAN
VDLWLGTVNFPIPEEWNVGTWLLGSPLLRHAISGGDDALLAQWETQWHAETISAEQLVRETTRSGWLQPLFHHWMRLKSP
DRARGIHLNNLGWFDFRSTWIEPGP

Sequences:

>Translated_585_residues
MTTRHTEQKYLKLLQHYGDKPVSVTLQELADVLFCTRRHMRNLLLQMQEAKWLIWQSQAGRGHRARLHLRYKPEQLLSEK
AEQLLESGHIDQAIQLLGKNKHQVAQLLRSKLGYSVRADYQRLCIPYYRTMPSLCPGIPLRRSEQHLVRQIFSGLTRINE
EKGEVEADLAHHWRQIDPLRWRFYLRPAVLWHDGQELTIDAVIASLTRSAKLPLFSHLQTIQATGPLSLEITLAHPDNRL
PLLLSHIDAMILPPDHTQRADFPAHPVGTGPYEVVENNGFHLQMKAFDHYFGLRGLLDEVEVFIWPNLTETDNLAESLSD
NDTAAWLSSSLSDEDYVSGRLSQVSGKPSDNLREMFLERGGYFLLCDSRSPHWHTAEHRRWLRETLSPYAILQHLSEAIR
PFWVPGGSLLSSWFHTIEAGPACSPFISSSPYAKLRLAYHDQHPEFPMLLDIMQEIMRQQGILLEGVELNYDDWANGKAN
VDLWLGTVNFPIPEEWNVGTWLLGSPLLRHAISGGDDALLAQWETQWHAETISAEQLVRETTRSGWLQPLFHHWMRLKSP
DRARGIHLNNLGWFDFRSTWIEPGP
>Mature_584_residues
TTRHTEQKYLKLLQHYGDKPVSVTLQELADVLFCTRRHMRNLLLQMQEAKWLIWQSQAGRGHRARLHLRYKPEQLLSEKA
EQLLESGHIDQAIQLLGKNKHQVAQLLRSKLGYSVRADYQRLCIPYYRTMPSLCPGIPLRRSEQHLVRQIFSGLTRINEE
KGEVEADLAHHWRQIDPLRWRFYLRPAVLWHDGQELTIDAVIASLTRSAKLPLFSHLQTIQATGPLSLEITLAHPDNRLP
LLLSHIDAMILPPDHTQRADFPAHPVGTGPYEVVENNGFHLQMKAFDHYFGLRGLLDEVEVFIWPNLTETDNLAESLSDN
DTAAWLSSSLSDEDYVSGRLSQVSGKPSDNLREMFLERGGYFLLCDSRSPHWHTAEHRRWLRETLSPYAILQHLSEAIRP
FWVPGGSLLSSWFHTIEAGPACSPFISSSPYAKLRLAYHDQHPEFPMLLDIMQEIMRQQGILLEGVELNYDDWANGKANV
DLWLGTVNFPIPEEWNVGTWLLGSPLLRHAISGGDDALLAQWETQWHAETISAEQLVRETTRSGWLQPLFHHWMRLKSPD
RARGIHLNNLGWFDFRSTWIEPGP

Specific function: Activates the small RNA gene sgrS under glucose- phosphate stress conditions as well as yfdZ. Represses its own transcription under both stress and non-stress conditions. Might act as a sensor of the intracellular accumulation of phosphoglucose by binding

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786256, Length=583, Percent_Identity=39.451114922813, Blast_Score=400, Evalue=1e-112,
Organism=Escherichia coli, GI1786650, Length=609, Percent_Identity=31.3628899835796, Blast_Score=197, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 67402; Mature: 67270

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRHTEQKYLKLLQHYGDKPVSVTLQELADVLFCTRRHMRNLLLQMQEAKWLIWQSQAG
CCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
RGHRARLHLRYKPEQLLSEKAEQLLESGHIDQAIQLLGKNKHQVAQLLRSKLGYSVRADY
CCCEEEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHCCH
QRLCIPYYRTMPSLCPGIPLRRSEQHLVRQIFSGLTRINEEKGEVEADLAHHWRQIDPLR
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE
WRFYLRPAVLWHDGQELTIDAVIASLTRSAKLPLFSHLQTIQATGPLSLEITLAHPDNRL
EEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCC
PLLLSHIDAMILPPDHTQRADFPAHPVGTGPYEVVENNGFHLQMKAFDHYFGLRGLLDEV
HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHC
EVFIWPNLTETDNLAESLSDNDTAAWLSSSLSDEDYVSGRLSQVSGKPSDNLREMFLERG
EEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCC
GYFLLCDSRSPHWHTAEHRRWLRETLSPYAILQHLSEAIRPFWVPGGSLLSSWFHTIEAG
CEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHCC
PACSPFISSSPYAKLRLAYHDQHPEFPMLLDIMQEIMRQQGILLEGVELNYDDWANGKAN
CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECEEECCCCCCCCCCC
VDLWLGTVNFPIPEEWNVGTWLLGSPLLRHAISGGDDALLAQWETQWHAETISAEQLVRE
EEEEEEEECCCCCCCCCCCEEECCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHH
TTRSGWLQPLFHHWMRLKSPDRARGIHLNNLGWFDFRSTWIEPGP
HHHCCCHHHHHHHHHHCCCCCHHCCEEECCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
TTRHTEQKYLKLLQHYGDKPVSVTLQELADVLFCTRRHMRNLLLQMQEAKWLIWQSQAG
CCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
RGHRARLHLRYKPEQLLSEKAEQLLESGHIDQAIQLLGKNKHQVAQLLRSKLGYSVRADY
CCCEEEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHCCH
QRLCIPYYRTMPSLCPGIPLRRSEQHLVRQIFSGLTRINEEKGEVEADLAHHWRQIDPLR
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE
WRFYLRPAVLWHDGQELTIDAVIASLTRSAKLPLFSHLQTIQATGPLSLEITLAHPDNRL
EEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCC
PLLLSHIDAMILPPDHTQRADFPAHPVGTGPYEVVENNGFHLQMKAFDHYFGLRGLLDEV
HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHC
EVFIWPNLTETDNLAESLSDNDTAAWLSSSLSDEDYVSGRLSQVSGKPSDNLREMFLERG
EEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCC
GYFLLCDSRSPHWHTAEHRRWLRETLSPYAILQHLSEAIRPFWVPGGSLLSSWFHTIEAG
CEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHCC
PACSPFISSSPYAKLRLAYHDQHPEFPMLLDIMQEIMRQQGILLEGVELNYDDWANGKAN
CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECEEECCCCCCCCCCC
VDLWLGTVNFPIPEEWNVGTWLLGSPLLRHAISGGDDALLAQWETQWHAETISAEQLVRE
EEEEEEEECCCCCCCCCCCEEECCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHH
TTRSGWLQPLFHHWMRLKSPDRARGIHLNNLGWFDFRSTWIEPGP
HHHCCCHHHHHHHHHHCCCCCHHCCEEECCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA