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The map label for this gene is dgoA [H]

Identifier: 16767113

GI number: 16767113

Start: 4030635

End: 4031783

Strand: Reverse

Name: dgoA [H]

Synonym: STM3828

Alternate gene names: 16767113

Gene position: 4031783-4030635 (Counterclockwise)

Preceding gene: 16767114

Following gene: 16767112

Centisome position: 83.0

GC content: 55.18

Gene sequence:

>1149_bases
ATGAAAATAACTCACATCACCACGTACCGTTTACCTCCACGTTGGATGTTCCTGAAAATCGAAACGGATGAAGGCGTGGT
TGGCTGGGGAGAGCCGGTCATTGAAGGTCGGGCACGTACTGTAGAGGCGGCAGTACATGAGTTTGCCGACTACCTGATAG
GGAAAGATCCGGCGCGTATCAACGACCTGTGGCAGGTAATGTACCGGGCCGGTTTTTATCGCGGCGGCCCGATTATGATG
AGCGCCATCGCCGGTATTGACCAGGCATTGTGGGATATCAAAGGCAAGGTGTTGAATGCGCCGGTCTGGCAGCTCATGGG
CGGCCTGGTGCGCGACAAAATCAAGGCCTATAGCTGGGTGGGCGGCGATCGTCCGGCAGACGTCATTGACGGTATTGAAA
AATTGCGCGGTATTGGTTTTGACACCTTCAAGCTGAACGGCTGTGAAGAGATGGGCGTGATTGATAACTCCCGTGCGGTG
GATGCGGCGGTCAATACCGTGGCGCAAATCCGCGAAGCTTTCGGCAGTGAAATTGAGTTTGGGCTCGATTTCCACGGTCG
CGTTAGCGCGCCGATGGCGAAGGTGCTGATTAAAGAACTGGAACCCTATCGTCCGCTGTTTATTGAAGAGCCGGTGCTGG
CGGAACAGGCGGAATATTATCCGCGCCTGGCAGCGCAAACGCATATTCCGATTGCCGCAGGCGAACGTATGTTCTCGCGT
TTTGAATTTAAACGCGTGCTGGACGCGGGTGGGCTGGCGATTCTACAGCCGGATTTATCCCACGCGGGCGGCATTACCGA
ATGCTATAAAATCGCCGGAATGGCGGAAGCATATGATGTGGCGCTGGCGCCGCATTGCCCGCTGGGTCCAATCGCCCTGG
CTGCCTGCCTGCATATCGATTTTGTTTCGCGCAACGCGGTATTCCAGGAACAGAGTATGGGCATTCACTATAACAAGGGC
GCGGAGCTGCTCGACTTTGTGAAAAATAAAGAAGACTTCAGCATGGACGGCGGCTTCTTTAAACCCTTAACCAAACCGGG
TCTTGGCGTAGACATTGACGAGGCCAGGGTGATTGAACTTAGCAAAAGCGCGCCGGACTGGCGTAATCCGTTGTGGCGGC
ACGCTGACGGATCGGTAGCCGAGTGGTGA

Upstream 100 bases:

>100_bases
GCGCGGGATTGGGTAGCGATCTCTATCGCGCCGGGCAATCCGTTGAACGCACCGCGCAGCAGGCTGCGGCATTTGTTAAT
GCGTATCGAGAGGCAGTGAA

Downstream 100 bases:

>100_bases
TCGCCACGCTGTAGGCTCAACAAACGTCGCCCTCCGGGCAACCCAATTTAAATATAAAAACACACCCTCTGTAATTTACA
GGGCATGGTGAGCGGCCTCG

Product: galactonate dehydratase

Products: NA

Alternate protein names: GalD 1 [H]

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKITHITTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAAVHEFADYLIGKDPARINDLWQVMYRAGFYRGGPIMM
SAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIEKLRGIGFDTFKLNGCEEMGVIDNSRAV
DAAVNTVAQIREAFGSEIEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPRLAAQTHIPIAAGERMFSR
FEFKRVLDAGGLAILQPDLSHAGGITECYKIAGMAEAYDVALAPHCPLGPIALAACLHIDFVSRNAVFQEQSMGIHYNKG
AELLDFVKNKEDFSMDGGFFKPLTKPGLGVDIDEARVIELSKSAPDWRNPLWRHADGSVAEW

Sequences:

>Translated_382_residues
MKITHITTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAAVHEFADYLIGKDPARINDLWQVMYRAGFYRGGPIMM
SAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIEKLRGIGFDTFKLNGCEEMGVIDNSRAV
DAAVNTVAQIREAFGSEIEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPRLAAQTHIPIAAGERMFSR
FEFKRVLDAGGLAILQPDLSHAGGITECYKIAGMAEAYDVALAPHCPLGPIALAACLHIDFVSRNAVFQEQSMGIHYNKG
AELLDFVKNKEDFSMDGGFFKPLTKPGLGVDIDEARVIELSKSAPDWRNPLWRHADGSVAEW
>Mature_382_residues
MKITHITTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAAVHEFADYLIGKDPARINDLWQVMYRAGFYRGGPIMM
SAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIEKLRGIGFDTFKLNGCEEMGVIDNSRAV
DAAVNTVAQIREAFGSEIEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPRLAAQTHIPIAAGERMFSR
FEFKRVLDAGGLAILQPDLSHAGGITECYKIAGMAEAYDVALAPHCPLGPIALAACLHIDFVSRNAVFQEQSMGIHYNKG
AELLDFVKNKEDFSMDGGFFKPLTKPGLGVDIDEARVIELSKSAPDWRNPLWRHADGSVAEW

Specific function: Catalyzes the dehydration of D-galactonate to 2-keto-3- deoxy-D-galactonate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. GalD subfamily [H]

Homologues:

Organism=Escherichia coli, GI48994953, Length=382, Percent_Identity=92.4083769633508, Blast_Score=736, Evalue=0.0,
Organism=Escherichia coli, GI1787864, Length=413, Percent_Identity=28.8135593220339, Blast_Score=178, Evalue=6e-46,
Organism=Escherichia coli, GI226510960, Length=344, Percent_Identity=27.906976744186, Blast_Score=92, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018110
- InterPro:   IPR013342
- InterPro:   IPR013341
- InterPro:   IPR001354 [H]

Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]

EC number: =4.2.1.6 [H]

Molecular weight: Translated: 42379; Mature: 42379

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00908 MR_MLE_1 ; PS00909 MR_MLE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITHITTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAAVHEFADYLIGKDPARI
CEEEEEEEEECCCCEEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHH
NDLWQVMYRAGFYRGGPIMMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCC
GGDRPADVIDGIEKLRGIGFDTFKLNGCEEMGVIDNSRAVDAAVNTVAQIREAFGSEIEF
CCCCCHHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
GLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPRLAAQTHIPIAAGERMFSR
CCCCCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FEFKRVLDAGGLAILQPDLSHAGGITECYKIAGMAEAYDVALAPHCPLGPIALAACLHID
HHHHHHHCCCCEEEECCCHHHCCCHHHHHHHHCCHHHHHEEECCCCCCHHHHHHHHHHHH
FVSRNAVFQEQSMGIHYNKGAELLDFVKNKEDFSMDGGFFKPLTKPGLGVDIDEARVIEL
HHHCCHHHHHHCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
SKSAPDWRNPLWRHADGSVAEW
CCCCCHHHCCHHCCCCCCCCCC
>Mature Secondary Structure
MKITHITTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAAVHEFADYLIGKDPARI
CEEEEEEEEECCCCEEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHH
NDLWQVMYRAGFYRGGPIMMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCC
GGDRPADVIDGIEKLRGIGFDTFKLNGCEEMGVIDNSRAVDAAVNTVAQIREAFGSEIEF
CCCCCHHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
GLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPRLAAQTHIPIAAGERMFSR
CCCCCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FEFKRVLDAGGLAILQPDLSHAGGITECYKIAGMAEAYDVALAPHCPLGPIALAACLHID
HHHHHHHCCCCEEEECCCHHHCCCHHHHHHHHCCHHHHHEEECCCCCCHHHHHHHHHHHH
FVSRNAVFQEQSMGIHYNKGAELLDFVKNKEDFSMDGGFFKPLTKPGLGVDIDEARVIEL
HHHCCHHHHHHCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
SKSAPDWRNPLWRHADGSVAEW
CCCCCHHHCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA