BacMap

Definition	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome.
Accession	NC_003197
Length	4,857,432

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The map label for this gene is dgoT [H]

Identifier: 16767112

GI number: 16767112

Start: 4029213

End: 4030550

Strand: Reverse

Name: dgoT [H]

Synonym: STM3827

Alternate gene names: 16767112

Gene position: 4030550-4029213 (Counterclockwise)

Preceding gene: 16767113

Following gene: 16767110

Centisome position: 82.98

GC content: 54.04

Gene sequence:

>1338_bases
ATGGTGAGCGGCCTCGCTATGCCCAGAATCTGGAGACAGATGACGATGGATATTTCAGTTACAGCAGCACAGCCGGGGCG
TCGCCGCTATCTGACGCTGGTGATGATCTTTATTACCGTGGTGATTTGCTACGTCGATCGCGCCAACCTTGCCGTAGCTT
CCATGCATATTCAAAAAGAATTCGGCATTACCAAAGCGGAAATGGGCTATGTCTTCTCCGCTTTTGCCTGGCTCTATACG
TTATGCCAGATCCCCGGCGGCTGGTTTCTCGACCGTATTGGGTCCCGGCTGACCTATTTTATCGCTATCTTCGGCTGGTC
AGTCGCAACGCTATTGCAGGGGTTTGCGACGGGACTATTGTCGCTTATCGGCCTGCGCGCTATTACCGGGATTTTCGAGG
CGCCGGCCTTTCCGGCAAATAACCGGATGGTCACTAGCTGGTTTCCGGAGCATGAGCGCGCATCCGCAGTCGGGTTCTAC
ACCTCCGGACAGTTCGTCGGACTGGCATTCCTTACGCCGCTGCTGATCTGGATTCAGGAAATGCTGAGCTGGCACTGGGT
CTTTATCGTCACCGGCGGTATCGGGATTATCTGGTCATTGGTCTGGTTTAAGGTTTATCAACCGCCGCGTTTGACGAAAA
GCCTTAGCCAGGCGGAGTTGGAGTATATTCGCGATGGCGGTGGTCTGGTGGATGGCGATGCGCCAGCGAAAAAAGAGGCC
CGCCAGCCGCTGACGAAAGCCGACTGGAAACTGGTGTTCCATCGTAAGCTGGTGGGCGTCTACCTCGGTCAGTTCGCCGT
AAACTCTACGCTATGGTTCTTTCTGACCTGGTTCCCTAATTATCTGACCCAGGAAAAAGGCATTACCGCGCTAAAAGCGG
GCTTTATGACGACCGTACCGTTCCTGGCTGCCTTTTTTGGCGTACTGCTCTCCGGCTGGCTGGCGGATAAACTGGTGAAA
AAAGGCTTCTCGCTGGGCGTGGCGCGCAAAACGCCGATTATTTGCGGTTTGCTCATCTCCACATGCATTATGGGCGCTAA
CTACACTAACGATCCGTTGTGGATTATGGCGTTGATGGCGATAGCTTTCTTCGGCAACGGATTTGCGTCCATTACCTGGT
CGTTAATCTCTTCCCTTGCGCCGATGCGGTTGATTGGCCTTACCGGCGGTATGTTTAACTTTATCGGTGGGTTAGGCGGG
ATTAGCGTACCGTTAGTGATTGGTTATCTGGCGCAAAGCTACGGTTTTGCTCCGGCGCTGGTCTATATCTCCGTTGTGGC
CCTGCTGGGCGCGCTGTCTTACATCCTGTTAGTGGGCGATGTGAAACGCGTCGGATAA

Upstream 100 bases:

>100_bases
GGTAGCCGAGTGGTGATCGCCACGCTGTAGGCTCAACAAACGTCGCCCTCCGGGCAACCCAATTTAAATATAAAAACACA
CCCTCTGTAATTTACAGGGC

Downstream 100 bases:

>100_bases
GTTGGCCGTGGCGAGCCGGAAGTCATTATGGCGAAGGATGACCGGCTATCCATGCGTCGAGCGCCGTCACTCCCTGCGTC
ACGATAGTTTTAATATCTAT

Product: D-galactonate transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MVSGLAMPRIWRQMTMDISVTAAQPGRRRYLTLVMIFITVVICYVDRANLAVASMHIQKEFGITKAEMGYVFSAFAWLYT
LCQIPGGWFLDRIGSRLTYFIAIFGWSVATLLQGFATGLLSLIGLRAITGIFEAPAFPANNRMVTSWFPEHERASAVGFY
TSGQFVGLAFLTPLLIWIQEMLSWHWVFIVTGGIGIIWSLVWFKVYQPPRLTKSLSQAELEYIRDGGGLVDGDAPAKKEA
RQPLTKADWKLVFHRKLVGVYLGQFAVNSTLWFFLTWFPNYLTQEKGITALKAGFMTTVPFLAAFFGVLLSGWLADKLVK
KGFSLGVARKTPIICGLLISTCIMGANYTNDPLWIMALMAIAFFGNGFASITWSLISSLAPMRLIGLTGGMFNFIGGLGG
ISVPLVIGYLAQSYGFAPALVYISVVALLGALSYILLVGDVKRVG

Sequences:

>Translated_445_residues
MVSGLAMPRIWRQMTMDISVTAAQPGRRRYLTLVMIFITVVICYVDRANLAVASMHIQKEFGITKAEMGYVFSAFAWLYT
LCQIPGGWFLDRIGSRLTYFIAIFGWSVATLLQGFATGLLSLIGLRAITGIFEAPAFPANNRMVTSWFPEHERASAVGFY
TSGQFVGLAFLTPLLIWIQEMLSWHWVFIVTGGIGIIWSLVWFKVYQPPRLTKSLSQAELEYIRDGGGLVDGDAPAKKEA
RQPLTKADWKLVFHRKLVGVYLGQFAVNSTLWFFLTWFPNYLTQEKGITALKAGFMTTVPFLAAFFGVLLSGWLADKLVK
KGFSLGVARKTPIICGLLISTCIMGANYTNDPLWIMALMAIAFFGNGFASITWSLISSLAPMRLIGLTGGMFNFIGGLGG
ISVPLVIGYLAQSYGFAPALVYISVVALLGALSYILLVGDVKRVG
>Mature_445_residues
MVSGLAMPRIWRQMTMDISVTAAQPGRRRYLTLVMIFITVVICYVDRANLAVASMHIQKEFGITKAEMGYVFSAFAWLYT
LCQIPGGWFLDRIGSRLTYFIAIFGWSVATLLQGFATGLLSLIGLRAITGIFEAPAFPANNRMVTSWFPEHERASAVGFY
TSGQFVGLAFLTPLLIWIQEMLSWHWVFIVTGGIGIIWSLVWFKVYQPPRLTKSLSQAELEYIRDGGGLVDGDAPAKKEA
RQPLTKADWKLVFHRKLVGVYLGQFAVNSTLWFFLTWFPNYLTQEKGITALKAGFMTTVPFLAAFFGVLLSGWLADKLVK
KGFSLGVARKTPIICGLLISTCIMGANYTNDPLWIMALMAIAFFGNGFASITWSLISSLAPMRLIGLTGGMFNFIGGLGG
ISVPLVIGYLAQSYGFAPALVYISVVALLGALSYILLVGDVKRVG

Specific function: Intake of galactonate into the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI6912666, Length=416, Percent_Identity=26.9230769230769, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI154350196, Length=413, Percent_Identity=25.181598062954, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI9945322, Length=409, Percent_Identity=25.1833740831296, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI9966811, Length=408, Percent_Identity=23.2843137254902, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI21322234, Length=417, Percent_Identity=23.5011990407674, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI148743791, Length=390, Percent_Identity=27.1794871794872, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI148728191, Length=335, Percent_Identity=27.1641791044776, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI223718438, Length=215, Percent_Identity=25.1162790697674, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI5031955, Length=276, Percent_Identity=25, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI87082320, Length=430, Percent_Identity=91.3953488372093, Blast_Score=803, Evalue=0.0,
Organism=Escherichia coli, GI1789515, Length=440, Percent_Identity=41.3636363636364, Blast_Score=359, Evalue=1e-100,
Organism=Escherichia coli, GI1789152, Length=442, Percent_Identity=41.6289592760181, Blast_Score=355, Evalue=5e-99,
Organism=Escherichia coli, GI2367379, Length=418, Percent_Identity=30.1435406698565, Blast_Score=191, Evalue=9e-50,
Organism=Escherichia coli, GI2367193, Length=410, Percent_Identity=27.5609756097561, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI87082071, Length=409, Percent_Identity=22.9828850855746, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87082404, Length=363, Percent_Identity=25.8953168044077, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788573, Length=439, Percent_Identity=22.3234624145786, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87082310, Length=313, Percent_Identity=22.6837060702875, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI115533554, Length=448, Percent_Identity=26.1160714285714, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI115533556, Length=444, Percent_Identity=26.3513513513513, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71997452, Length=434, Percent_Identity=25.3456221198157, Blast_Score=95, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17552542, Length=431, Percent_Identity=25.0580046403712, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17560030, Length=377, Percent_Identity=25.9946949602122, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI86561091, Length=238, Percent_Identity=25.6302521008403, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25141318, Length=238, Percent_Identity=25.6302521008403, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25141341, Length=238, Percent_Identity=25.6302521008403, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25141316, Length=238, Percent_Identity=25.6302521008403, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17535049, Length=432, Percent_Identity=24.3055555555556, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI32565916, Length=260, Percent_Identity=23.0769230769231, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17569727, Length=298, Percent_Identity=24.1610738255034, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI32565914, Length=260, Percent_Identity=23.8461538461538, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17554148, Length=362, Percent_Identity=24.3093922651934, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193205400, Length=239, Percent_Identity=24.2677824267782, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17554962, Length=336, Percent_Identity=24.4047619047619, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24648416, Length=426, Percent_Identity=25.5868544600939, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI21356189, Length=426, Percent_Identity=25.5868544600939, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI45550460, Length=318, Percent_Identity=25.7861635220126, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24655255, Length=279, Percent_Identity=26.1648745519713, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28573299, Length=418, Percent_Identity=23.2057416267943, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24658658, Length=411, Percent_Identity=24.0875912408759, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24639764, Length=417, Percent_Identity=23.7410071942446, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI62484226, Length=410, Percent_Identity=24.390243902439, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24655271, Length=408, Percent_Identity=22.3039215686275, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI20130135, Length=408, Percent_Identity=22.3039215686275, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI20130167, Length=440, Percent_Identity=22.7272727272727, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI28573708, Length=342, Percent_Identity=21.9298245614035, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28573707, Length=342, Percent_Identity=21.9298245614035, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24654215, Length=472, Percent_Identity=24.1525423728814, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI19920686, Length=358, Percent_Identity=24.3016759776536, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI45550495, Length=409, Percent_Identity=22.0048899755501, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24658674, Length=412, Percent_Identity=23.0582524271845, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24584153, Length=300, Percent_Identity=21.6666666666667, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24641682, Length=374, Percent_Identity=24.8663101604278, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24583789, Length=383, Percent_Identity=21.6710182767624, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24653727, Length=390, Percent_Identity=24.3589743589744, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19922400, Length=427, Percent_Identity=24.3559718969555, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI20129235, Length=321, Percent_Identity=24.6105919003115, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24580790, Length=354, Percent_Identity=25.1412429378531, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24658689, Length=406, Percent_Identity=23.8916256157635, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552797, Length=406, Percent_Identity=23.8916256157635, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221474708, Length=281, Percent_Identity=25.6227758007117, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI281361682, Length=348, Percent_Identity=22.4137931034483, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI45550364, Length=406, Percent_Identity=22.4137931034483, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR000849
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49002; Mature: 49002

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSGLAMPRIWRQMTMDISVTAAQPGRRRYLTLVMIFITVVICYVDRANLAVASMHIQKE
CCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FGITKAEMGYVFSAFAWLYTLCQIPGGWFLDRIGSRLTYFIAIFGWSVATLLQGFATGLL
HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLIGLRAITGIFEAPAFPANNRMVTSWFPEHERASAVGFYTSGQFVGLAFLTPLLIWIQE
HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
MLSWHWVFIVTGGIGIIWSLVWFKVYQPPRLTKSLSQAELEYIRDGGGLVDGDAPAKKEA
HHHHEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
RQPLTKADWKLVFHRKLVGVYLGQFAVNSTLWFFLTWFPNYLTQEKGITALKAGFMTTVP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FLAAFFGVLLSGWLADKLVKKGFSLGVARKTPIICGLLISTCIMGANYTNDPLWIMALMA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IAFFGNGFASITWSLISSLAPMRLIGLTGGMFNFIGGLGGISVPLVIGYLAQSYGFAPAL
HHHHCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHH
VYISVVALLGALSYILLVGDVKRVG
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVSGLAMPRIWRQMTMDISVTAAQPGRRRYLTLVMIFITVVICYVDRANLAVASMHIQKE
CCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FGITKAEMGYVFSAFAWLYTLCQIPGGWFLDRIGSRLTYFIAIFGWSVATLLQGFATGLL
HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLIGLRAITGIFEAPAFPANNRMVTSWFPEHERASAVGFYTSGQFVGLAFLTPLLIWIQE
HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
MLSWHWVFIVTGGIGIIWSLVWFKVYQPPRLTKSLSQAELEYIRDGGGLVDGDAPAKKEA
HHHHEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
RQPLTKADWKLVFHRKLVGVYLGQFAVNSTLWFFLTWFPNYLTQEKGITALKAGFMTTVP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FLAAFFGVLLSGWLADKLVKKGFSLGVARKTPIICGLLISTCIMGANYTNDPLWIMALMA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IAFFGNGFASITWSLISSLAPMRLIGLTGGMFNFIGGLGGISVPLVIGYLAQSYGFAPAL
HHHHCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHH
VYISVVALLGALSYILLVGDVKRVG
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]