| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is sugR
Identifier: 16767037
GI number: 16767037
Start: 3950009
End: 3951199
Strand: Direct
Name: sugR
Synonym: STM3753
Alternate gene names: NA
Gene position: 3950009-3951199 (Clockwise)
Preceding gene: 16767033
Following gene: 16767038
Centisome position: 81.32
GC content: 49.79
Gene sequence:
>1191_bases ATGAGAATCGACAAACTTTCACTGCTTAACTTTCGTTGCTTCAGACAGCTCGATATTACTTTTGATGAGCACATTACGAT TCTGGTTGCACCGAATGGCGCGGGCAAGACGACAGTGCTGGATGCGATACGCCTGGCGCTGTTTCCCTTTATTCGTGGTT TTGATGCCAGCCTCTACGTAAAAGATAAATCGCTGGCGATCCGTACAGAAGATGTACGTCTGGTTTTCCGCCCCGAAGCG CTGAACATGGAAATGTCGTCTCCGGCCATGATTACGGCTACCGGGGAATGGGAAAGTGGAAAAACGGCAACCTGGATGCT CGACAAGCGAGGAGAACAGCCGCCGCATGAAGATAAGACAGCGGCGCAGCTTACCCGTTGGGGTGAACAACTTCAGACGC TGGTGCGTGAAGAGCATAATTTGCAGCAGGTTGAGCTTCCCCTAATGCTTTATCTGGGGACTGCTCGCTTGTGGTATCAG GAACGTTATGAGGCACAGCCTACTGAACAGCGTCTGGATAACAGCGCCTTTTCACGTTTGTCTGGTTATGACGATTGCCT TTCTGCCACATCAAATTATAAGCAATTTGAACAATGGTATAGCTGGTTATGGCTTAGCTACCGTGAACATCAAATCACAC AACTTGAATCACCTTCAGCAAAGTTAAAAGAAGGTGTTCGTGTTCAGCGGATGAAAGAAGCTATTCAAGCCATCCAGCAA GCCATTAACTGTCTGACGCAGGAAGTGACTGGCTGGCACGATCTGGAATACAGCTCCAGCCATAACCAGCAATTGGTGAT GAACCATCCACAGCACGGTAAGATTCCCTTATCCCAGCTCAGCGACGGCCTGCGTAATGCGGTTGCGATGGTAGCGGATA TCGCGTTTCGCTGTGTCAAACTCAACCCCCATTTACGCGATGAAGCCGCCTTAAAAACACAGGGGATTGTGCTGATCGAT GAAGTCGATATGTTCCTGCACCCAGCCTGGCAGCAGCAAATTATCCAGTCTTTGCGCAGCGCATTTCCACTAATCCAGTT TATTGTCACTACCCATAGCCCGCAGGTTATCAGCACGGTAAAACGTGAGTCTGTTCGCCTACTTGAACAGGACGAGAAAG GTAATGGTCTGGCGTCAATACCAGCGGGGCGACCTACGGCGAGCCAAGTAATGATGTACTGCACAGCGTGA
Upstream 100 bases:
>100_bases AACGTGATAAAAGGCGTAACCTTTGCCCGCTTAAAGCGGGCAAGATTGCAGGCAAGAGATGTTATTATACTAAAACATAA AAACAGGTGAGGCTGGTGTA
Downstream 100 bases:
>100_bases TGGGCGTCGATCCGCAACCTCCGGTTAAGGAACAGGATGTTTTCGAACGTGGGATTATCAATGTATTTAAGGGGTTAAGC CAGGAGTACAAAACCAATAA
Product: ATP binding protein
Products: NA
Alternate protein names: SMC Domain Protein; SMC Domain-Containing Protein; AAA ATPase; RecF/RecN/SMC N Terminal Domain; PgaA Protein; RecF/RecN/SMC Family Protein; Antigen PgaA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MRIDKLSLLNFRCFRQLDITFDEHITILVAPNGAGKTTVLDAIRLALFPFIRGFDASLYVKDKSLAIRTEDVRLVFRPEA LNMEMSSPAMITATGEWESGKTATWMLDKRGEQPPHEDKTAAQLTRWGEQLQTLVREEHNLQQVELPLMLYLGTARLWYQ ERYEAQPTEQRLDNSAFSRLSGYDDCLSATSNYKQFEQWYSWLWLSYREHQITQLESPSAKLKEGVRVQRMKEAIQAIQQ AINCLTQEVTGWHDLEYSSSHNQQLVMNHPQHGKIPLSQLSDGLRNAVAMVADIAFRCVKLNPHLRDEAALKTQGIVLID EVDMFLHPAWQQQIIQSLRSAFPLIQFIVTTHSPQVISTVKRESVRLLEQDEKGNGLASIPAGRPTASQVMMYCTA
Sequences:
>Translated_396_residues MRIDKLSLLNFRCFRQLDITFDEHITILVAPNGAGKTTVLDAIRLALFPFIRGFDASLYVKDKSLAIRTEDVRLVFRPEA LNMEMSSPAMITATGEWESGKTATWMLDKRGEQPPHEDKTAAQLTRWGEQLQTLVREEHNLQQVELPLMLYLGTARLWYQ ERYEAQPTEQRLDNSAFSRLSGYDDCLSATSNYKQFEQWYSWLWLSYREHQITQLESPSAKLKEGVRVQRMKEAIQAIQQ AINCLTQEVTGWHDLEYSSSHNQQLVMNHPQHGKIPLSQLSDGLRNAVAMVADIAFRCVKLNPHLRDEAALKTQGIVLID EVDMFLHPAWQQQIIQSLRSAFPLIQFIVTTHSPQVISTVKRESVRLLEQDEKGNGLASIPAGRPTASQVMMYCTA >Mature_396_residues MRIDKLSLLNFRCFRQLDITFDEHITILVAPNGAGKTTVLDAIRLALFPFIRGFDASLYVKDKSLAIRTEDVRLVFRPEA LNMEMSSPAMITATGEWESGKTATWMLDKRGEQPPHEDKTAAQLTRWGEQLQTLVREEHNLQQVELPLMLYLGTARLWYQ ERYEAQPTEQRLDNSAFSRLSGYDDCLSATSNYKQFEQWYSWLWLSYREHQITQLESPSAKLKEGVRVQRMKEAIQAIQQ AINCLTQEVTGWHDLEYSSSHNQQLVMNHPQHGKIPLSQLSDGLRNAVAMVADIAFRCVKLNPHLRDEAALKTQGIVLID EVDMFLHPAWQQQIIQSLRSAFPLIQFIVTTHSPQVISTVKRESVRLLEQDEKGNGLASIPAGRPTASQVMMYCTA
Specific function: Unknown
COG id: COG3950
COG function: function code R; Predicted ATP-binding protein involved in virulence
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45272; Mature: 45272
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDKLSLLNFRCFRQLDITFDEHITILVAPNGAGKTTVLDAIRLALFPFIRGFDASLYV CCCCHHHHHHHHHHHHCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEE KDKSLAIRTEDVRLVFRPEALNMEMSSPAMITATGEWESGKTATWMLDKRGEQPPHEDKT ECCCEEEEEECEEEEECCHHCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCHH AAQLTRWGEQLQTLVREEHNLQQVELPLMLYLGTARLWYQERYEAQPTEQRLDNSAFSRL HHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SGYDDCLSATSNYKQFEQWYSWLWLSYREHQITQLESPSAKLKEGVRVQRMKEAIQAIQQ CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHH AINCLTQEVTGWHDLEYSSSHNQQLVMNHPQHGKIPLSQLSDGLRNAVAMVADIAFRCVK HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEE LNPHLRDEAALKTQGIVLIDEVDMFLHPAWQQQIIQSLRSAFPLIQFIVTTHSPQVISTV CCCCCCCCHHHHHCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KRESVRLLEQDEKGNGLASIPAGRPTASQVMMYCTA HHHHHHHHHCCCCCCCEEECCCCCCCHHHEEEEECC >Mature Secondary Structure MRIDKLSLLNFRCFRQLDITFDEHITILVAPNGAGKTTVLDAIRLALFPFIRGFDASLYV CCCCHHHHHHHHHHHHCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEE KDKSLAIRTEDVRLVFRPEALNMEMSSPAMITATGEWESGKTATWMLDKRGEQPPHEDKT ECCCEEEEEECEEEEECCHHCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCHH AAQLTRWGEQLQTLVREEHNLQQVELPLMLYLGTARLWYQERYEAQPTEQRLDNSAFSRL HHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SGYDDCLSATSNYKQFEQWYSWLWLSYREHQITQLESPSAKLKEGVRVQRMKEAIQAIQQ CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHH AINCLTQEVTGWHDLEYSSSHNQQLVMNHPQHGKIPLSQLSDGLRNAVAMVADIAFRCVK HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEE LNPHLRDEAALKTQGIVLIDEVDMFLHPAWQQQIIQSLRSAFPLIQFIVTTHSPQVISTV CCCCCCCCHHHHHCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KRESVRLLEQDEKGNGLASIPAGRPTASQVMMYCTA HHHHHHHHHCCCCCCCEEECCCCCCCHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA