| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is recG [H]
Identifier: 16767029
GI number: 16767029
Start: 3936881
End: 3938962
Strand: Direct
Name: recG [H]
Synonym: STM3744
Alternate gene names: 16767029
Gene position: 3936881-3938962 (Clockwise)
Preceding gene: 16767028
Following gene: 16767032
Centisome position: 81.05
GC content: 58.5
Gene sequence:
>2082_bases ATGTCAGGCCGCTTGTTAGACGCTGTTCCGCTCAATTCCCTGACAGGCGTCGGCGCAGCGCAAAGCAGTAAACTGGCGAA AATTGGCCTGCACACCGTGCAGGACCTCCTGCTCCACCTCCCTCTGCGTTACGAAGACCGCACCCATCTCTACCCCATTG GCGAACTGCTGCCTGGCATCTACGCCACCGTTGAAGGCGAAGTGCTGAACTGCAATATCACTTTCGGCGGTCGTCGGATG ATGACCTGCCAGATTAGCGACGGTTCCGGCATTCTTACCATGCGCTTTTTCAATTTTAACGCAGCGATGAAAAACAGCCT GGCGACGGGACGACGTGTGCTGGCCTACGGGGAAGCGAAGCGCGGCAAGTATGGCGCAGAGATGATCCATCCGGAATATC GCCTGCAGGGCGATCTCAGCACGCCGGAACTTCAGGAAACGCTCACCCCCGTCTATCCGACCACCGAGGGCGTGAAGCAA GCGACACTGCGCAAGCTTACCGATCAGGCGCTGGAGTTGCTCGACACCTGCGCCATTGCCGAACTACTGCCGCCGGAACT GGCGCAGGGTATGATGAGCCTGCCGGAGGCGCTACGTACCTTGCATCGCCCGCCGCCGACGCTCCAGCTCGCCGATTTAG AAACCGGCAAACACCCGGCGCAGCGGCGGCTTATTCTTGAAGAGCTACTGGCGCATAATCTCAGTATGCTGGCGCTTCGC GCAGGCGCGCAGCGCTACCACGCTCAGCCGCTAAGTACCAACAACATATTGAAAGACAAGCTGCTGGCGTCGTTGCCGTT TAAACCCACCAGCGCGCAGGCGCGGGTGGTAGCAGAGATCGAACGTGATATGGCGCTGGATGTGCCGATGATGCGTCTGG TTCAGGGCGACGTGGGTTCCGGTAAAACGTTGGTTGCGGCGCTTGCCGCCTTGCGCGCTATTGCCCACGGTAAGCAGGTG GCGCTGATGGCGCCGACCGAATTGCTGGCTGAACAGCACGCAAATAATTTCCGCAACTGGTTCGAACCGTTGGGCGTTGA AGTGGGTTGGCTGGCCGGTAAGCAAAAAGGTAAAGCGCGTCAGGCGCAGCAAGAGGCTATTGCCAGCGGTCAGGTGCAGA TGATTGTCGGCACCCACGCTATCTTCCAGGAACAGGTGCAGTTTAACGGGCTGGCGCTGGTTATTATCGATGAGCAGCAC CGCTTTGGCGTCCACCAGCGGCTGGCATTGTGGGAAAAAGGCCAGCAGCAGGGCTTTCATCCGCATCAGTTGATTATGAC CGCAACGCCCATTCCGCGCACCCTGGCGATGACTGCCTACGCCGATCTCGATACCTCGGTGATTGACGAGCTACCGCCGG GCCGTACCCCTGTCACTACCGTTGCGATTCCGGATACCCGTCGCCATGAAATCATTGATCGTGTGCGCAACGCCTGCACA ACCGAAGGCCGTCAGGCCTACTGGGTCTGTACGCTGATTGAAGAGTCAGACCTGCTGGAAGCGCAGGCAGCGGAAGCCAC CTGGGAGGAGCTCAAGCTGGCGTTACCGGAGTTGAATATCGGCCTGGTACACGGCCGCATGAAGCCCGCCGAAAAACAGG CGGTGATGCAGGCCTTTAAGCAGGGCGAACTGCATCTGCTGGTCGCCACTACGGTGATTGAGGTGGGGGTCGATGTTCCT AACGCCAGCCTGATGATTATTGAAAACCCGGAGCGACTGGGCCTGGCGCAGTTACACCAGCTCAGAGGGCGCGTTGGCCG TGGCGCGGTCGCATCGCACTGCGTGCTGCTCTATAAATCGCCGCTGTCGAAAACGGCGCAGAAGCGTTTACAGGTATTGC GCGACAGCAACGACGGCTTTGTGATTGCACAAAAAGATTTAGAGATTCGCGGCCCGGGGGAATTACTGGGCACGCGCCAG ACGGGTAACGCCGAATTTAAAGTAGCTGATTTGCTGCGCGATCAAGCCATGATCCCCGAAGTTCAGCGTATTGCCCGTCA TATTCACGAACGTTATCCACAGCAGGCACAAGCGCTGATTGAGCGCTGGATGCCGGAAACCGAACGTTATTCCAACGCCT AA
Upstream 100 bases:
>100_bases CTAAACGTAAAGGTCTGCCTTATCCTCGCGTCAATCAGCAGGGCGAAATCGACGCCGATGCTGACTGGTGGGCGACGATG CAGGCGGCAGGGTAATCACC
Downstream 100 bases:
>100_bases TCCTATTCGCCGCGCGACAGAGCCAACAGAAGATCCTCAATCTGGATAGCGATAACGTCCTGGGCTGCCAGGGCATCGCG CGAGATACGCGTTGCCATCG
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 693; Mature: 692
Protein sequence:
>693_residues MSGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGIYATVEGEVLNCNITFGGRRM MTCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQ ATLRKLTDQALELLDTCAIAELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALR AGAQRYHAQPLSTNNILKDKLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQV ALMAPTELLAEQHANNFRNWFEPLGVEVGWLAGKQKGKARQAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQH RFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRHEIIDRVRNACT TEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGELHLLVATTVIEVGVDVP NASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQ TGNAEFKVADLLRDQAMIPEVQRIARHIHERYPQQAQALIERWMPETERYSNA
Sequences:
>Translated_693_residues MSGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGIYATVEGEVLNCNITFGGRRM MTCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQ ATLRKLTDQALELLDTCAIAELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALR AGAQRYHAQPLSTNNILKDKLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQV ALMAPTELLAEQHANNFRNWFEPLGVEVGWLAGKQKGKARQAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQH RFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRHEIIDRVRNACT TEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGELHLLVATTVIEVGVDVP NASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQ TGNAEFKVADLLRDQAMIPEVQRIARHIHERYPQQAQALIERWMPETERYSNA >Mature_692_residues SGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGIYATVEGEVLNCNITFGGRRMM TCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQA TLRKLTDQALELLDTCAIAELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALRA GAQRYHAQPLSTNNILKDKLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVA LMAPTELLAEQHANNFRNWFEPLGVEVGWLAGKQKGKARQAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHR FGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRHEIIDRVRNACTT EGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGELHLLVATTVIEVGVDVPN ASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQT GNAEFKVADLLRDQAMIPEVQRIARHIHERYPQQAQALIERWMPETERYSNA
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=693, Percent_Identity=94.3722943722944, Blast_Score=1324, Evalue=0.0, Organism=Escherichia coli, GI1787357, Length=390, Percent_Identity=39.2307692307692, Blast_Score=244, Evalue=1e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 76597; Mature: 76465
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGI CCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCC YATVEGEVLNCNITFGGRRMMTCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAK EEEECCEEEEEEEEECCCEEEEEEECCCCCEEEEEEEECCHHHHHHHHCCCEEEEECCCC RGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQATLRKLTDQALELLDTCAIA CCCCCHHHCCCCCEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALR HHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHH AGAQRYHAQPLSTNNILKDKLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGS HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCC GKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFEPLGVEVGWLAGKQKGKAR CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHH QAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFH HHHHHHHHCCCEEEEECHHHHHHHHHHHCCEEEEEECCCHHCCHHHHHHHHHHHHHCCCC PHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRHEIIDRVRNACT CCEEEEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC TEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFK CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH QGELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKS CCCEEEEEEHHHHHHCCCCCCCEEEEEECCHHCCHHHHHHHHHCCCCCHHHHHHHHEECC PLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPE HHHHHHHHHHHHHHCCCCCEEEEECCCEECCCHHHCCCCCCCCCCCHHHHHHHHHHCCHH VQRIARHIHERYPQQAQALIERWMPETERYSNA HHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCCC >Mature Secondary Structure SGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGI CCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCC YATVEGEVLNCNITFGGRRMMTCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAK EEEECCEEEEEEEEECCCEEEEEEECCCCCEEEEEEEECCHHHHHHHHCCCEEEEECCCC RGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQATLRKLTDQALELLDTCAIA CCCCCHHHCCCCCEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALR HHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHH AGAQRYHAQPLSTNNILKDKLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGS HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCC GKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFEPLGVEVGWLAGKQKGKAR CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHH QAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFH HHHHHHHHCCCEEEEECHHHHHHHHHHHCCEEEEEECCCHHCCHHHHHHHHHHHHHCCCC PHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRHEIIDRVRNACT CCEEEEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC TEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFK CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH QGELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKS CCCEEEEEEHHHHHHCCCCCCCEEEEEECCHHCCHHHHHHHHHCCCCCHHHHHHHHEECC PLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPE HHHHHHHHHHHHHHCCCCCEEEEECCCEECCCHHHCCCCCCCCCCCHHHHHHHHHHCCHH VQRIARHIHERYPQQAQALIERWMPETERYSNA HHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]