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The map label for this gene is yajF [C]

Identifier: 16766966

GI number: 16766966

Start: 3869680

End: 3870561

Strand: Direct

Name: yajF [C]

Synonym: STM3681

Alternate gene names: 16766966

Gene position: 3869680-3870561 (Clockwise)

Preceding gene: 16766964

Following gene: 16766970

Centisome position: 79.67

GC content: 56.8

Gene sequence:

>882_bases
ATGCAGCAATATATCGGTATTGATGTGGGAGGAACTCACGTCAAATATGGCGTGATTAACAGTGACGGCGAAGAATTAAC
CCATCATCAATTCGATACGCCAGAGGACGCCTCCACGTTTACCCGCAAATGGCAGGATGTGGTGGCGCGTTGCCAACAGG
ACTATGACATTGCGGCAATCGGGGTCAGTTTCCCTGGCCATATTAATCCCCATAACGGTCATGCGGCAAAAGCGGGCGCG
CTGGCTTACCTGGATGACGTCAACCTGATGGAGTTGTTCAGCGGGCTGACCGATCTGCCGCTGGTCGTGGAGAACGACGC
GAACTGTGCGGCGCTGGGCGAAATGTGGCGAGGTGCCGGGCAGCATTATGAAAACATGGTCTGCATTACCATTGGAACCG
GCATTGGCGGCGGTATTATCGTCGGACGAGAACTGTATCGCGGCGCGCATTTTCACGCCGGTGAATTCGGCGTCATGCCG
GTCGGGAACAATGGCGAAAGTATGCATAAAATCGCGTCAACCAGCGGATTAATGGCGTCGTGCCGCCAGGCGCTGGCGCT
GCCTGCCGAAGAGATGCCGCCTGCGGATGTGATCTTCGAACGAATGGCGACCGATGTTCATCTGCGTGAGGCGGTCAATG
ACTGGGCGCGTTATCTTTCACGCGGCGTTTACAGCGTGATCTCTATGTTTGATCCGGGCGTGGTGCTGATCGGCGGAGGA
ATAAGCGAACAGGAAAAGCTCTACCCGCTCCTGACGCGGCATCTTGAAACGTTTGAAATGTGGGAGGCGCTCCAGGTGCC
GATTCAGCCCTGCCAACTGGGAAATCAGGCGGGCAGGCTGGGCGCCGTCTGGCTGGCGCAGCAAAAGCTCGACCGAGGCT
AA

Upstream 100 bases:

>100_bases
TCCCGCTTTACGACAGCAATCACGAATTACTTTCCTTTACGTTTCTCCGTCTGGTTTTAGCCATACTAAACAGGTGCCTG
TTTAACGTACGGAGAACACT

Downstream 100 bases:

>100_bases
CGTGTTACGCCTTATCCGGCCTGCATTGTCTACGCAGGCCCGGTAAGCGTCCGCGCCACCGGGCAAAGGCGTTACATCGC
CGTGCGATAAAGTTCCACAA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MQQYIGIDVGGTHVKYGVINSDGEELTHHQFDTPEDASTFTRKWQDVVARCQQDYDIAAIGVSFPGHINPHNGHAAKAGA
LAYLDDVNLMELFSGLTDLPLVVENDANCAALGEMWRGAGQHYENMVCITIGTGIGGGIIVGRELYRGAHFHAGEFGVMP
VGNNGESMHKIASTSGLMASCRQALALPAEEMPPADVIFERMATDVHLREAVNDWARYLSRGVYSVISMFDPGVVLIGGG
ISEQEKLYPLLTRHLETFEMWEALQVPIQPCQLGNQAGRLGAVWLAQQKLDRG

Sequences:

>Translated_293_residues
MQQYIGIDVGGTHVKYGVINSDGEELTHHQFDTPEDASTFTRKWQDVVARCQQDYDIAAIGVSFPGHINPHNGHAAKAGA
LAYLDDVNLMELFSGLTDLPLVVENDANCAALGEMWRGAGQHYENMVCITIGTGIGGGIIVGRELYRGAHFHAGEFGVMP
VGNNGESMHKIASTSGLMASCRQALALPAEEMPPADVIFERMATDVHLREAVNDWARYLSRGVYSVISMFDPGVVLIGGG
ISEQEKLYPLLTRHLETFEMWEALQVPIQPCQLGNQAGRLGAVWLAQQKLDRG
>Mature_293_residues
MQQYIGIDVGGTHVKYGVINSDGEELTHHQFDTPEDASTFTRKWQDVVARCQQDYDIAAIGVSFPGHINPHNGHAAKAGA
LAYLDDVNLMELFSGLTDLPLVVENDANCAALGEMWRGAGQHYENMVCITIGTGIGGGIIVGRELYRGAHFHAGEFGVMP
VGNNGESMHKIASTSGLMASCRQALALPAEEMPPADVIFERMATDVHLREAVNDWARYLSRGVYSVISMFDPGVVLIGGG
ISEQEKLYPLLTRHLETFEMWEALQVPIQPCQLGNQAGRLGAVWLAQQKLDRG

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI87081733, Length=308, Percent_Identity=24.6753246753247, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787363, Length=302, Percent_Identity=25.1655629139073, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 31906; Mature: 31906

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQYIGIDVGGTHVKYGVINSDGEELTHHQFDTPEDASTFTRKWQDVVARCQQDYDIAAI
CCCEEEEEECCCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
GVSFPGHINPHNGHAAKAGALAYLDDVNLMELFSGLTDLPLVVENDANCAALGEMWRGAG
EECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCC
QHYENMVCITIGTGIGGGIIVGRELYRGAHFHAGEFGVMPVGNNGESMHKIASTSGLMAS
CCCCCEEEEEEECCCCCHHEECHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
CRQALALPAEEMPPADVIFERMATDVHLREAVNDWARYLSRGVYSVISMFDPGVVLIGGG
HHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
ISEQEKLYPLLTRHLETFEMWEALQVPIQPCQLGNQAGRLGAVWLAQQKLDRG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQQYIGIDVGGTHVKYGVINSDGEELTHHQFDTPEDASTFTRKWQDVVARCQQDYDIAAI
CCCEEEEEECCCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
GVSFPGHINPHNGHAAKAGALAYLDDVNLMELFSGLTDLPLVVENDANCAALGEMWRGAG
EECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCC
QHYENMVCITIGTGIGGGIIVGRELYRGAHFHAGEFGVMPVGNNGESMHKIASTSGLMAS
CCCCCEEEEEEECCCCCHHEECHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
CRQALALPAEEMPPADVIFERMATDVHLREAVNDWARYLSRGVYSVISMFDPGVVLIGGG
HHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
ISEQEKLYPLLTRHLETFEMWEALQVPIQPCQLGNQAGRLGAVWLAQQKLDRG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]