Click here to switch to the map view.

The map label for this gene is 16766955

Identifier: 16766955

GI number: 16766955

Start: 3857137

End: 3858069

Strand: Direct

Name: 16766955

Synonym: STM3670

Alternate gene names: NA

Gene position: 3857137-3858069 (Clockwise)

Preceding gene: 16766954

Following gene: 16766956

Centisome position: 79.41

GC content: 51.88

Gene sequence:

>933_bases
ATGAAAAATAATACCGGTTATATTATCGGTGCGTACCCTTGTGCACCCTCATTTCACCAGAAGAGTGAAGAGGAAGAGAC
GGAATTCTGGCGGCAACTCTCTGATACTCCGGATATCCGGGGGCTGGAGCAGCCTTGTCTTGAACATCTTCACCCGCTCG
GCGACGAGTGGTTATTGCGCCATACACCAGGGAACTGGCAAATCGTGGTCACCGCGATAATGGAAACCATGCGCCGCCGT
AGCGAAAACGGCGGTTTTGGATTAGCGTCCAGTGACGAGGAACAGCGTAAAGCCTGCGTGGAATACTACCGTCATCTTTA
TCAGAAGATCAATAAAATCAATGGGAACAATACCGGCAAAGTCATAGCCCTTGAGCTTCATGCCGCCCCGCTGGCGGGCA
ATCCGAACGTGGCGCAGGCAACCGACGCCTTTGCGCGCTCATTAAAAGAGATTGCCAACTGGGACTGGTCCTGCGACCTG
GTGCTTGAACACTGCGACGCGATGACCGGCCCCGCACCGCGCAAAGGATTCTTACCGTTGGTAAACGTACTGGAAACTAT
TGCCGACTATGACATAAGCGTCTGCATTAACTGGGCGCGCTCGGCTATTGAAGGGCGGGATACCTCTCTACCGCTGATCC
ACACGCAGCAGGCCAAACAGGCTGGAAAACTCGGGGCACTGATGTTCTCCGGTACAACGCTGGATGGAGAATACGGCGAA
TGGCAGGACCTCCATGCTCCGTTTGCACCTTTCTGTCCACAAAGTCTGATGACGGAGAAACATGTTAAAGAACTGATTAC
CGCCGCCGCTCCCGAACTGTTGCAGTTTACCGGTATTAAATTGTTGGAAATCAATGCCAGTGCCGATATTAATCACCGCA
TAAATATATTACGCGATGGTATTAACATGATGAAAAAGGCCACACGCCGCTAA

Upstream 100 bases:

>100_bases
ATCGTCCAGGTTGTAATAAAAGCATTGCTACGCCGATACGGAAAATAGTCGTAAAAGTCGCCATAGACGTTTTATAAAAT
AGAGTTTACTGGAGCACAAA

Downstream 100 bases:

>100_bases
CCTGAATTAAACATCATCACCTTAATTCTCGGCCTGCAACTCAACGTTGCGCCGACCTAATATAAACCAAACATAAGAAA
TTAAGTTCCACTATTCAGCA

Product: chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKNNTGYIIGAYPCAPSFHQKSEEEETEFWRQLSDTPDIRGLEQPCLEHLHPLGDEWLLRHTPGNWQIVVTAIMETMRRR
SENGGFGLASSDEEQRKACVEYYRHLYQKINKINGNNTGKVIALELHAAPLAGNPNVAQATDAFARSLKEIANWDWSCDL
VLEHCDAMTGPAPRKGFLPLVNVLETIADYDISVCINWARSAIEGRDTSLPLIHTQQAKQAGKLGALMFSGTTLDGEYGE
WQDLHAPFAPFCPQSLMTEKHVKELITAAAPELLQFTGIKLLEINASADINHRINILRDGINMMKKATRR

Sequences:

>Translated_310_residues
MKNNTGYIIGAYPCAPSFHQKSEEEETEFWRQLSDTPDIRGLEQPCLEHLHPLGDEWLLRHTPGNWQIVVTAIMETMRRR
SENGGFGLASSDEEQRKACVEYYRHLYQKINKINGNNTGKVIALELHAAPLAGNPNVAQATDAFARSLKEIANWDWSCDL
VLEHCDAMTGPAPRKGFLPLVNVLETIADYDISVCINWARSAIEGRDTSLPLIHTQQAKQAGKLGALMFSGTTLDGEYGE
WQDLHAPFAPFCPQSLMTEKHVKELITAAAPELLQFTGIKLLEINASADINHRINILRDGINMMKKATRR
>Mature_310_residues
MKNNTGYIIGAYPCAPSFHQKSEEEETEFWRQLSDTPDIRGLEQPCLEHLHPLGDEWLLRHTPGNWQIVVTAIMETMRRR
SENGGFGLASSDEEQRKACVEYYRHLYQKINKINGNNTGKVIALELHAAPLAGNPNVAQATDAFARSLKEIANWDWSCDL
VLEHCDAMTGPAPRKGFLPLVNVLETIADYDISVCINWARSAIEGRDTSLPLIHTQQAKQAGKLGALMFSGTTLDGEYGE
WQDLHAPFAPFCPQSLMTEKHVKELITAAAPELLQFTGIKLLEINASADINHRINILRDGINMMKKATRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YiaX1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3670_SALTY (Q8ZL81)

Other databases:

- EMBL:   AE006468
- RefSeq:   NP_462570.1
- GeneID:   1255194
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM3670
- NMPDR:   fig|99287.1.peg.3546
- HOGENOM:   HBG417185
- OMA:   RDGINMM
- ProtClustDB:   CLSK894517
- BioCyc:   STYP99287:STM3670-MONOMER
- InterPro:   IPR013022

Pfam domain/function: SSF51658 Xyl_isomerase-like_TIM-brl

EC number: NA

Molecular weight: Translated: 34720; Mature: 34720

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNTGYIIGAYPCAPSFHQKSEEEETEFWRQLSDTPDIRGLEQPCLEHLHPLGDEWLLR
CCCCCCEEEECCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEE
HTPGNWQIVVTAIMETMRRRSENGGFGLASSDEEQRKACVEYYRHLYQKINKINGNNTGK
ECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VIALELHAAPLAGNPNVAQATDAFARSLKEIANWDWSCDLVLEHCDAMTGPAPRKGFLPL
EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHH
VNVLETIADYDISVCINWARSAIEGRDTSLPLIHTQQAKQAGKLGALMFSGTTLDGEYGE
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHHCCCEEEEEECCCCCCCCCC
WQDLHAPFAPFCPQSLMTEKHVKELITAAAPELLQFTGIKLLEINASADINHRINILRDG
CHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHH
INMMKKATRR
HHHHHHHHCC
>Mature Secondary Structure
MKNNTGYIIGAYPCAPSFHQKSEEEETEFWRQLSDTPDIRGLEQPCLEHLHPLGDEWLLR
CCCCCCEEEECCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEE
HTPGNWQIVVTAIMETMRRRSENGGFGLASSDEEQRKACVEYYRHLYQKINKINGNNTGK
ECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VIALELHAAPLAGNPNVAQATDAFARSLKEIANWDWSCDLVLEHCDAMTGPAPRKGFLPL
EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHH
VNVLETIADYDISVCINWARSAIEGRDTSLPLIHTQQAKQAGKLGALMFSGTTLDGEYGE
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHHCCCEEEEEECCCCCCCCCC
WQDLHAPFAPFCPQSLMTEKHVKELITAAAPELLQFTGIKLLEINASADINHRINILRDG
CHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHH
INMMKKATRR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609